Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|678_1
Gene name
LocationNODE_678:3618..4315
Strand-
Gene length (bp)697
Transcript length (bp)489
Coding sequence length (bp)489
Protein length (aa) 163

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 2.5E-09 29 92

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999724

Transmembrane Domains

Domain # Start End Length
1 142 161 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup817
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|306400
Agaricus bisporus var bisporus H97 AgabiH97|065230
Rhodonia placenta FPRL280 RhoplFPRL280|330_7
Rhodonia placenta FPRL280 RhoplFPRL280|515_4
Rhodonia placenta FPRL280 RhoplFPRL280|678_1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|678_1
MFVKTLVLAALLGAAAAQSSSAAVPTSTAGIDPCILSCLQSAVSANTCSSVTDLACVCSSTAFQEAAAECLASKC
TTAEQQAALALQSAECAAAAASSGASSASSGASSASSGASSGAASTSASTTPTTSKSAGAAVRLQRGAVVGVLVA
LAGVGAGAALVL*
Coding >RhoplFPRL280|678_1
ATGTTCGTCAAGACGCTCGTCCTCGCCGCCCTCCTCGGTGCCGCCGCCGCCCAGAGCAGCTCCGCCGCCGTGCCC
ACCAGCACCGCCGGCATCGATCCCTGCATCCTCTCCTGCCTCCAGAGCGCCGTCTCTGCGAACACCTGCTCCAGC
GTCACGGACCTCGCCTGCGTGTGCTCGTCCACCGCGTTCCAGGAGGCCGCGGCCGAGTGCCTCGCGAGCAAGTGC
ACCACGGCCGAGCAGCAGGCCGCCCTCGCCCTCCAGTCAGCAGAGTGCGCCGCCGCTGCTGCGTCGTCGGGCGCA
TCCTCAGCGTCGTCGGGCGCATCCTCAGCGTCGTCGGGCGCATCCTCCGGTGCCGCATCCACATCCGCCTCCACC
ACACCGACGACGAGCAAGAGCGCCGGCGCGGCGGTGCGTCTGCAGCGCGGCGCCGTCGTCGGCGTGCTCGTCGCG
CTTGCGGGCGTCGGCGCGGGCGCGGCGCTGGTGCTGTGA
Transcript >RhoplFPRL280|678_1
ATGTTCGTCAAGACGCTCGTCCTCGCCGCCCTCCTCGGTGCCGCCGCCGCCCAGAGCAGCTCCGCCGCCGTGCCC
ACCAGCACCGCCGGCATCGATCCCTGCATCCTCTCCTGCCTCCAGAGCGCCGTCTCTGCGAACACCTGCTCCAGC
GTCACGGACCTCGCCTGCGTGTGCTCGTCCACCGCGTTCCAGGAGGCCGCGGCCGAGTGCCTCGCGAGCAAGTGC
ACCACGGCCGAGCAGCAGGCCGCCCTCGCCCTCCAGTCAGCAGAGTGCGCCGCCGCTGCTGCGTCGTCGGGCGCA
TCCTCAGCGTCGTCGGGCGCATCCTCAGCGTCGTCGGGCGCATCCTCCGGTGCCGCATCCACATCCGCCTCCACC
ACACCGACGACGAGCAAGAGCGCCGGCGCGGCGGTGCGTCTGCAGCGCGGCGCCGTCGTCGGCGTGCTCGTCGCG
CTTGCGGGCGTCGGCGCGGGCGCGGCGCTGGTGCTGTGA
Gene >RhoplFPRL280|678_1
ATGTTCGTCAAGACGCTCGTCCTCGCCGCCCTCCTCGGTGCCGCCGCCGCCCAGAGCAGCTCCGCCGCCGTGCCC
ACCAGCACCGCCGGCATCGATCCCTGCATCCTCTCCTGCCTCCAGAGCGCCGTCTCTGCGAACACCTGCTCCAGC
GTGTGCGTATTCCCACTCCTTACCCCTCCCTCTTTCTAGCGCGCCGCCTCATGCACGCGTTCTAACCTTTGCGCC
CGCCAGCACGGACCTCGCCTGCGTGTGCTCGTCCACCGCGTTCCAGGAGGCCGCGGCCGAGTGCCTCGCGAGCAA
GTGCACCACGGCCGAGCAGCAGGCCGCCCTCGCCCTCCAGTCAGCAGAGTGCGCCGCCGGTACGTCCTTGTCCTT
GTCCCCGTCCTCATCTCCCCCCGCCCCCCACAGCGATATCCTCTCATAGTGCATCGCGGCTCATGCTGATGTACG
CCCAGCATCCGCCTCCTCCGGCGCCGCTTCCGCGACCTCTGCTGCGTCGTCGGGCGCATCCTCAGCGTCGTCGGG
CGCATCCTCAGCGTCGTCGGGCGCATCCTCCGGTGCCGCATCCACATCCGCCTCCACCACACCGACGACGAGCAA
GAGCGCCGGCGCGGCGGTGCGTCTGCAGCGCGGCGCCGTCGTCGGCGTGCTCGTCGCGCTTGCGGGCGTCGGCGC
GGGCGCGGCGCTGGTGCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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