Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|593_2
Gene name
LocationNODE_593:2348..3508
Strand-
Gene length (bp)1160
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11991 Trp_DMAT Tryptophan dimethylallyltransferase 8.9E-64 1 293

GO

GO Term Description Terminal node
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Yes
GO:0009820 alkaloid metabolic process Yes
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0016740 transferase activity No
GO:1901564 organonitrogen compound metabolic process No
GO:0006807 nitrogen compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|593_2
MTDDHSPIEFSCIYSADRLPTVRFSIDPIKRQQESEPALHIFEHFATLLSLSLETDLAWCRVCAETLVISENSAS
MPTSLSHPSQYFIGFDLSRKGTGLKAYFLTETCSAVYGVSKTDVVSSLVDRLSAIPGMEAPNIYIAWCEIKAFFQ
LLPQHLQPSLEIVAVDCAPSHANRLKIYFRIPLATLSTIRRVMTLDSTLQLPDVEKTLEWVTLFWRLLFPNITDD
EEPSVELARLRHPTSGLLFYFDLRPDHTKPSPKVYIPVRHLCRNDGDIIHAVTCLYDMLGFEKARDSYGHFVRNT
FVHKRMETKTGVHTYVSFAAKQGDAEITAYFNPECFSSEGPV*
Coding >RhoplFPRL280|593_2
ATGACTGACGACCACTCCCCAATTGAGTTCTCGTGTATCTACTCAGCCGATAGGCTGCCCACTGTTCGGTTCTCC
ATTGATCCCATCAAGAGGCAGCAGGAGAGCGAACCGGCCCTCCATATATTCGAACACTTCGCGACTCTGCTCTCT
TTGTCGTTGGAGACAGATCTCGCTTGGTGTCGGGTTTGCGCTGAGACCCTGGTGATATCGGAGAATTCCGCCAGC
ATGCCGACTAGCCTATCCCATCCGTCACAGTACTTTATCGGATTTGATCTTTCCCGAAAGGGCACAGGATTGAAG
GCATACTTCCTGACGGAAACATGCTCCGCAGTCTATGGTGTATCCAAGACAGATGTCGTGTCCTCTTTAGTCGAC
CGGCTGTCCGCTATCCCGGGAATGGAGGCACCTAATATCTACATCGCATGGTGCGAAATCAAGGCTTTCTTTCAG
TTGCTCCCGCAACATCTCCAGCCATCCCTGGAGATCGTTGCAGTGGATTGCGCTCCATCACATGCGAATAGGCTC
AAGATATATTTTCGCATACCACTGGCGACACTGTCTACCATCAGACGCGTGATGACCCTCGACTCCACACTACAG
CTGCCCGACGTCGAGAAAACACTTGAGTGGGTCACGTTGTTTTGGAGACTTCTTTTCCCGAATATCACAGATGAT
GAGGAACCAAGCGTTGAGCTTGCGCGACTTCGGCATCCTACGAGCGGTCTCTTGTTCTACTTCGACCTGCGTCCG
GACCATACCAAACCATCCCCAAAGGTCTACATTCCCGTACGTCACCTTTGTAGAAATGATGGAGACATCATTCAC
GCGGTGACGTGCCTCTACGACATGCTGGGCTTCGAGAAGGCAAGGGACTCGTACGGACACTTCGTGCGCAATACT
TTCGTCCACAAGAGAATGGAAACGAAGACAGGTGTTCACACATATGTATCATTTGCCGCTAAGCAGGGTGATGCT
GAGATTACCGCTTACTTCAACCCGGAGTGCTTCTCCAGCGAGGGGCCAGTGTAG
Transcript >RhoplFPRL280|593_2
ATGACTGACGACCACTCCCCAATTGAGTTCTCGTGTATCTACTCAGCCGATAGGCTGCCCACTGTTCGGTTCTCC
ATTGATCCCATCAAGAGGCAGCAGGAGAGCGAACCGGCCCTCCATATATTCGAACACTTCGCGACTCTGCTCTCT
TTGTCGTTGGAGACAGATCTCGCTTGGTGTCGGGTTTGCGCTGAGACCCTGGTGATATCGGAGAATTCCGCCAGC
ATGCCGACTAGCCTATCCCATCCGTCACAGTACTTTATCGGATTTGATCTTTCCCGAAAGGGCACAGGATTGAAG
GCATACTTCCTGACGGAAACATGCTCCGCAGTCTATGGTGTATCCAAGACAGATGTCGTGTCCTCTTTAGTCGAC
CGGCTGTCCGCTATCCCGGGAATGGAGGCACCTAATATCTACATCGCATGGTGCGAAATCAAGGCTTTCTTTCAG
TTGCTCCCGCAACATCTCCAGCCATCCCTGGAGATCGTTGCAGTGGATTGCGCTCCATCACATGCGAATAGGCTC
AAGATATATTTTCGCATACCACTGGCGACACTGTCTACCATCAGACGCGTGATGACCCTCGACTCCACACTACAG
CTGCCCGACGTCGAGAAAACACTTGAGTGGGTCACGTTGTTTTGGAGACTTCTTTTCCCGAATATCACAGATGAT
GAGGAACCAAGCGTTGAGCTTGCGCGACTTCGGCATCCTACGAGCGGTCTCTTGTTCTACTTCGACCTGCGTCCG
GACCATACCAAACCATCCCCAAAGGTCTACATTCCCGTACGTCACCTTTGTAGAAATGATGGAGACATCATTCAC
GCGGTGACGTGCCTCTACGACATGCTGGGCTTCGAGAAGGCAAGGGACTCGTACGGACACTTCGTGCGCAATACT
TTCGTCCACAAGAGAATGGAAACGAAGACAGGTGTTCACACATATGTATCATTTGCCGCTAAGCAGGGTGATGCT
GAGATTACCGCTTACTTCAACCCGGAGTGCTTCTCCAGCGAGGGGCCAGTGTAG
Gene >RhoplFPRL280|593_2
ATGACTGACGACCACTCCCCAATTGAGTTCTCGTGTATCTACTCAGCCGATAGGCTGCCCACTGTTCGGTTCTCC
ATTGATCCCATCAAGAGGCAGCAGGAGAGCGAACCGGCCCTCCATATATTCGAACACTTCGCGACTCTGCTCTCT
TTGTCGTTGGAGACAGATCTCGCTTGGTGTCGGGTTTGCGCTGAGACCCTGGTGATATCGGAGAATTCCGCCAGC
ATGCCGACTAGCCTATCCCATCCGTCACAGTACTTTATCGGTCAGTCGTATAGCCATCCAACATATGCGCTTCTA
ATGCAGCTTGGCCTCCAATAGGATTTGATCTTTCCCGAAAGGGCACAGGATTGAAGGCATACTTCCTGACGGAAA
CATGCTCCGCAGTCTATGGTGTATCCAAGACAGATGTCGTGTCCTCTTTAGTCGACCGGCTGTCCGCTATCCCGG
GAATGGAGGCACCTAATATCTACATCGCATGGTGCGAAATCAAGGCTTTCTTTCAGTTGCTCCCGCAACATCTCC
AGCCATCCCTGGAGATCGTTGCAGTGGATTGCGCTCCATCACATGCGAATAGGCTCAAGATATATTTTCGCATAC
CACTGGCGACACTGTCTACCATCAGACGCGTGATGACCCTCGACTCCACACTACAGCTGCCCGACGTCGAGAAAA
CACTTGAGTGGGTCACGTTGTTTTGGAGACTTCTTTTCCCGAATATCACAGATGATGAGGAACCAAGCGTTGAGC
TTGCGCGACTTCGGCATCCTACGAGCGGTCTCTTGTTCTACTTCGACCTGCGTCCGGACCATACCAAACCATCCC
CAAAGGTCTACATTCCCGTACGTCACCTTTGTAGAAATGATGGAGACATCATTCACGCGGTGACGTGCCTCTACG
ACATGCTGGGCTTCGAGAAGGCAAGGGACTCGTACGGACACTTCGTGCGCAATACTTTGTGAGCTTCTTGTTTGT
GTGCTCAAAGCCATTGTTAATATAATGAGTTATGTTCACATGTTTATCCGTGTTCCAGCGTCCACAAGAGAATGG
AAACGAAGACAGGTGTTCACACATATGTATCATTTGCCGCTAAGCAGGGTGATGCTGAGATTACCGCTTACTTCA
ACCCGGAGTGCTTCTCCAGCGAGGGGCCAGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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