Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|551_2
Gene name
LocationNODE_551:869..2034
Strand-
Gene length (bp)1165
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01764 Lipase_3 Lipase (class 3) 4.9E-19 93 237

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.999703

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup106
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|000340
Agaricus bisporus var bisporus H39 AgabiH39|001820
Agaricus bisporus var bisporus H39 AgabiH39|001830
Agaricus bisporus var bisporus H39 AgabiH39|063250
Agaricus bisporus var bisporus H39 AgabiH39|090410
Agaricus bisporus var bisporus H97 AgabiH97|000340
Agaricus bisporus var bisporus H97 AgabiH97|001820
Agaricus bisporus var bisporus H97 AgabiH97|001830
Agaricus bisporus var bisporus H97 AgabiH97|063250
Agaricus bisporus var bisporus H97 AgabiH97|090410
Rhodonia placenta FPRL280 RhoplFPRL280|214_10
Rhodonia placenta FPRL280 RhoplFPRL280|283_4
Rhodonia placenta FPRL280 RhoplFPRL280|551_2 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|551_3

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|551_2
MLIALGVALLTAAPVVQAIPASGLRARQAITALEQSQITAFTPYTYYASAGYCPASETLTWTCGANCEANPGFEP
VASGGFVGYDPTLETVIVSHQGTDPEEILPLVTDGDITLVNLDSTLFPGLSSDIEVHEGFADAQAETATDVLSAV
QSTMSTYGASKVTIVGHSLDSLSSGAAISLLDSVYLPLHISDATFTFVGYGLPRVGNQAFANYVDAQPTSVTHIN
NEEDPIPICPGMFLGFVHPSGEVHIQDSGEWAACPGQDNPSTQCIVGDVPTVLDGDESDHDGPYNGIEMGC*
Coding >RhoplFPRL280|551_2
ATGCTCATTGCGCTCGGCGTCGCGCTGCTCACTGCGGCCCCGGTCGTACAGGCCATCCCTGCGTCAGGCTTGAGG
GCAAGGCAGGCCATCACCGCACTGGAGCAGTCACAGATCACGGCATTCACCCCATACACATACTATGCGAGCGCT
GGTTACTGCCCCGCATCGGAGACGCTGACCTGGACTTGTGGCGCCAACTGCGAGGCGAACCCGGGATTCGAGCCG
GTAGCGTCAGGAGGGTTCGTCGGGTATGATCCCACACTGGAGACCGTCATCGTATCACATCAAGGAACAGATCCT
GAGGAGATTTTGCCTCTGGTCACTGATGGAGACATAACACTGGTGAACTTGGACTCGACATTGTTCCCCGGATTG
AGCTCCGATATCGAAGTGCACGAAGGCTTTGCAGATGCTCAAGCAGAGACCGCAACAGACGTGTTGTCGGCTGTG
CAGTCGACCATGTCGACGTATGGTGCCAGCAAGGTCACGATTGTTGGTCATTCATTGGACTCACTTTCATCAGGC
GCGGCAATTTCACTGCTTGACTCCGTATATCTGCCGCTTCACATCTCGGATGCGACCTTCACGTTTGTGGGCTAT
GGCTTGCCACGGGTCGGCAATCAAGCGTTTGCGAACTACGTCGACGCGCAGCCGACGTCCGTGACGCACATTAAC
AACGAGGAGGATCCGATCCCTATCTGCCCAGGCATGTTCCTCGGCTTCGTCCACCCATCGGGTGAGGTCCACATC
CAAGACTCGGGCGAGTGGGCGGCGTGCCCTGGCCAGGACAACCCGAGCACGCAGTGCATCGTCGGAGACGTACCA
ACTGTTCTTGATGGCGATGAGTCGGACCACGATGGACCGTACAACGGGATTGAGATGGGCTGTTAA
Transcript >RhoplFPRL280|551_2
ATGCTCATTGCGCTCGGCGTCGCGCTGCTCACTGCGGCCCCGGTCGTACAGGCCATCCCTGCGTCAGGCTTGAGG
GCAAGGCAGGCCATCACCGCACTGGAGCAGTCACAGATCACGGCATTCACCCCATACACATACTATGCGAGCGCT
GGTTACTGCCCCGCATCGGAGACGCTGACCTGGACTTGTGGCGCCAACTGCGAGGCGAACCCGGGATTCGAGCCG
GTAGCGTCAGGAGGGTTCGTCGGGTATGATCCCACACTGGAGACCGTCATCGTATCACATCAAGGAACAGATCCT
GAGGAGATTTTGCCTCTGGTCACTGATGGAGACATAACACTGGTGAACTTGGACTCGACATTGTTCCCCGGATTG
AGCTCCGATATCGAAGTGCACGAAGGCTTTGCAGATGCTCAAGCAGAGACCGCAACAGACGTGTTGTCGGCTGTG
CAGTCGACCATGTCGACGTATGGTGCCAGCAAGGTCACGATTGTTGGTCATTCATTGGACTCACTTTCATCAGGC
GCGGCAATTTCACTGCTTGACTCCGTATATCTGCCGCTTCACATCTCGGATGCGACCTTCACGTTTGTGGGCTAT
GGCTTGCCACGGGTCGGCAATCAAGCGTTTGCGAACTACGTCGACGCGCAGCCGACGTCCGTGACGCACATTAAC
AACGAGGAGGATCCGATCCCTATCTGCCCAGGCATGTTCCTCGGCTTCGTCCACCCATCGGGTGAGGTCCACATC
CAAGACTCGGGCGAGTGGGCGGCGTGCCCTGGCCAGGACAACCCGAGCACGCAGTGCATCGTCGGAGACGTACCA
ACTGTTCTTGATGGCGATGAGTCGGACCACGATGGACCGTACAACGGGATTGAGATGGGCTGTTAA
Gene >RhoplFPRL280|551_2
ATGCTCATTGCGCTCGGCGTCGCGCTGCTCACTGCGGCCCCGGTCGTACAGGCCATCCCTGCGTCAGGCTTGAGG
GCAAGGCAGGCCATCACCGCACTGGAGCAGTCACAGATCACGGCATTCACCCCATACACATACTATGCGAGCGCT
GGTTACTGCCCCGCATCGGAGACGCTGACCTGGACTTGTGGCGCCAACTGCGAGGCGAACCCGGGATTCGAGCCG
GTAGCGTCAGGAGGTGATGGCGATGGAACGCAGTATTGCAAGTGGCCTGATAGCTCATGGCCGAACTGTTTACTC
ACTCGCCACAAGGGTTCGTCGGGTATGATCCCACACTGGAGACCGTCATCGTATCACATCAAGGAACAGATCCTG
AGGAGATGTGGGTGAACAGGACGTTGGTGGAATGCTGAGGCAGACTGCTGACTCGAATGCTAGTTTGCCTCTGGT
CACTGATGGAGACATAACACTGGTGAACTTGGACTCGACATTGTTCCCCGGATTGAGCTCCGATATCGAAGTGCA
CGAAGGCTTTGCAGATGCTCAAGCAGAGTCCGTCCATCTGCTGGAACAGATCAGGCGGTAGCTGAAACGTGATGT
AGGACCGCAACAGACGTGTTGTCGGCTGTGCAGTCGACCATGTCGACGTATGGTGCCAGCAAGGTCACGATTGTT
GGTCATTCATTGGGTATGTGATATCTCCACGAAGCAACCGCAACGGCACGGCAGACTCACTTTCATCAGGCGCGG
CAATTTCACTGCTTGACTCCGTATATCTGCCGCTTCACATCTCGGATGCGACCTTCACGTTTGTGGGCTATGGCT
TGCCACGGGTGCGTTCCTTCCATCCCCCTCCCGTGCATCACTGATCATGGTGATCTCCTAGGTCGGCAATCAAGC
GTTTGCGAACTACGTCGACGCGCAGCCGACGTCCGTGACGCACATTAACAACGAGGAGGATCCGATCCCTATCTG
CCCAGGCATGTTCCTCGGCTTCGTCCACCCATCGGGTGAGGTCCACATCCAAGACTCGGGCGAGTGGGCGGCGTG
CCCTGGCCAGGACAACCCGAGCACGCAGTGCATCGTCGGAGACGTACCAACTGTTCTTGATGGCGATGAGTCGGA
CCACGATGGACCGTACAACGGGATTGAGATGGGCTGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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