Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|515_4
Gene name
LocationNODE_515:6101..6878
Strand-
Gene length (bp)777
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.99979

Transmembrane Domains

Domain # Start End Length
1 2 21 19
2 31 53 22
3 199 221 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup817
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|306400
Agaricus bisporus var bisporus H97 AgabiH97|065230
Rhodonia placenta FPRL280 RhoplFPRL280|330_7
Rhodonia placenta FPRL280 RhoplFPRL280|515_4 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|678_1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|515_4
MFLRILIAFSLLLFGFRSVGAQSIPPLPTGLPGVGGVCIATCTTLAAVQYGCITPANLPCVCTSTAYWDGALSCL
RNNCTTQDVQLASDLQVDQCLYVSFFTNPTSVSSAASRFSVAASSVLASESSVYSSISSAYKSKGSALSSALESY
ASSVSSVLSSEAASIAGIPQSNAVSPASTSGGSTNTANAAAGSRVGYTMGIVGHIASLVVLLSMLFGATIIL*
Coding >RhoplFPRL280|515_4
ATGTTCTTACGAATCCTCATTGCGTTCTCTCTTTTGCTCTTTGGCTTTCGATCGGTGGGCGCTCAGAGTATCCCG
CCGCTACCGACCGGACTTCCGGGTGTCGGCGGAGTTTGTATAGCAACTTGTACAACATTGGCAGCCGTACAGTAC
GGTTGTATTACTCCGGCGAATCTGCCTTGTGTGTGTACGTCAACTGCGTACTGGGACGGGGCGCTGTCTTGCTTG
CGCAATAACTGCACCACGCAGGACGTCCAGCTAGCATCTGACTTACAAGTGGACCAGTGCCTCTACGTATCGTTC
TTCACGAACCCTACAAGCGTGTCGTCAGCGGCCTCGCGGTTCTCTGTCGCCGCATCGTCCGTGCTGGCAAGCGAA
TCCTCCGTCTACTCGTCCATCTCATCCGCCTACAAGTCCAAAGGCTCTGCGCTCTCATCCGCACTCGAGTCCTAT
GCGTCTTCTGTGTCCAGTGTGCTGTCGTCGGAAGCAGCCTCGATCGCGGGTATACCACAATCTAACGCGGTCTCC
CCTGCGAGCACGAGCGGAGGCTCGACAAATACTGCGAATGCAGCCGCTGGAAGTCGGGTCGGATATACGATGGGT
ATCGTTGGTCACATTGCTTCGCTCGTAGTGCTCCTCAGTATGTTGTTCGGGGCGACCATTATCTTATGA
Transcript >RhoplFPRL280|515_4
ATGTTCTTACGAATCCTCATTGCGTTCTCTCTTTTGCTCTTTGGCTTTCGATCGGTGGGCGCTCAGAGTATCCCG
CCGCTACCGACCGGACTTCCGGGTGTCGGCGGAGTTTGTATAGCAACTTGTACAACATTGGCAGCCGTACAGTAC
GGTTGTATTACTCCGGCGAATCTGCCTTGTGTGTGTACGTCAACTGCGTACTGGGACGGGGCGCTGTCTTGCTTG
CGCAATAACTGCACCACGCAGGACGTCCAGCTAGCATCTGACTTACAAGTGGACCAGTGCCTCTACGTATCGTTC
TTCACGAACCCTACAAGCGTGTCGTCAGCGGCCTCGCGGTTCTCTGTCGCCGCATCGTCCGTGCTGGCAAGCGAA
TCCTCCGTCTACTCGTCCATCTCATCCGCCTACAAGTCCAAAGGCTCTGCGCTCTCATCCGCACTCGAGTCCTAT
GCGTCTTCTGTGTCCAGTGTGCTGTCGTCGGAAGCAGCCTCGATCGCGGGTATACCACAATCTAACGCGGTCTCC
CCTGCGAGCACGAGCGGAGGCTCGACAAATACTGCGAATGCAGCCGCTGGAAGTCGGGTCGGATATACGATGGGT
ATCGTTGGTCACATTGCTTCGCTCGTAGTGCTCCTCAGTATGTTGTTCGGGGCGACCATTATCTTATGA
Gene >RhoplFPRL280|515_4
ATGTTCTTACGAATCCTCATTGCGTTCTCTCTTTTGCTCTTTGGCTTTCGATCGGTGGGCGCTCAGAGTATCCCG
CCGCTACCGACCGGACTTCCGGGTGTCGGCGGAGTTTGTATAGCAACTTGTACAACATTGGCAGCCGTACAGTAC
GGTTGTATTACTCCGTATGTTTTCTCAGTCGTCGTCGACTCAGGACTTAGACTAAAATGTATAATAGGGCGAATC
TGCCTTGTGTGTGTACGTCAACTGCGTACTGGGACGGGGCGCTGTCTTGCTTGCGCAATAACTGCACCACGCAGG
ACGTCCAGCTAGCATCTGACTTACAAGTGGACCAGTGCCTCTACGGTCAGTTTATGGCATCCCTTGGGGTCACCG
GTATAATCTGATAATCTTTCCACAGTATCGTTCTTCACGAACCCTACAAGCGTGTCGTCAGCGGCCTCGCGGTTC
TCTGTCGCCGCATCGTCCGTGCTGGCAAGCGAATCCTCCGTCTACTCGTCCATCTCATCCGCCTACAAGTCCAAA
GGCTCTGCGCTCTCATCCGCACTCGAGTCCTATGCGTCTTCTGTGTCCAGTGTGCTGTCGTCGGAAGCAGCCTCG
ATCGCGGGTATACCACAATCTAACGCGGTCTCCCCTGCGAGCACGAGCGGAGGCTCGACAAATACTGCGAATGCA
GCCGCTGGAAGTCGGGTCGGATATACGATGGGTATCGTTGGTCACATTGCTTCGCTCGTAGTGCTCCTCAGTATG
TTGTTCGGGGCGACCATTATCTTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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