Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|509_3
Gene name
LocationNODE_509:11844..12519
Strand+
Gene length (bp)675
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 1.3E-07 7 79

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup152
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|071030
Agaricus bisporus var bisporus H39 AgabiH39|071040
Agaricus bisporus var bisporus H39 AgabiH39|083920
Agaricus bisporus var bisporus H97 AgabiH97|071030
Agaricus bisporus var bisporus H97 AgabiH97|071040
Agaricus bisporus var bisporus H97 AgabiH97|083920
Rhodonia placenta FPRL280 RhoplFPRL280|233_5
Rhodonia placenta FPRL280 RhoplFPRL280|287_8
Rhodonia placenta FPRL280 RhoplFPRL280|335_4
Rhodonia placenta FPRL280 RhoplFPRL280|335_6
Rhodonia placenta FPRL280 RhoplFPRL280|335_7
Rhodonia placenta FPRL280 RhoplFPRL280|509_3 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|594_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|509_3
LIVRSVGYVGGSVLTRLQNHPSANTFDITALVRSAEKAKVLQEKFGVKTVVGSNEDLDKLEALSEQSHVVISCAD
SDNTPPMEAILRGLRKRHASTGDLPILIHTSGTGVIATPAKGMFASDLIYSDTDVAQIKSIPPTALHRNVDLTVM
DADEQGYVRTYIIVPSTIYGQAKGPLFDAGISNPISI*
Coding >RhoplFPRL280|509_3
CTCATCGTGAGATCTGTAGGCTACGTTGGTGGCTCGGTCCTCACACGCCTTCAGAACCACCCCAGCGCGAACACC
TTCGACATTACGGCGCTCGTACGATCTGCCGAGAAGGCAAAGGTGCTTCAGGAAAAATTCGGGGTCAAGACCGTC
GTAGGGTCCAATGAGGACCTTGACAAGCTCGAGGCACTCTCGGAGCAATCGCACGTTGTCATCTCTTGCGCAGAC
TCGGACAACACACCCCCGATGGAGGCGATCCTGCGAGGCTTGAGGAAGCGGCACGCATCGACTGGCGATCTTCCC
ATCCTGATCCACACCTCGGGCACAGGCGTGATTGCCACGCCAGCCAAGGGCATGTTCGCCTCGGACTTGATCTAC
TCTGATACCGACGTCGCACAAATCAAATCCATTCCACCAACGGCGTTGCACAGAAATGTTGACCTCACTGTGATG
GACGCTGACGAACAAGGCTATGTGCGGACCTACATCATCGTGCCGTCGACCATCTACGGCCAGGCGAAGGGCCCT
TTATTCGATGCGGGTATCTCGAACCCAATTTCGATCTAG
Transcript >RhoplFPRL280|509_3
CTCATCGTGAGATCTGTAGGCTACGTTGGTGGCTCGGTCCTCACACGCCTTCAGAACCACCCCAGCGCGAACACC
TTCGACATTACGGCGCTCGTACGATCTGCCGAGAAGGCAAAGGTGCTTCAGGAAAAATTCGGGGTCAAGACCGTC
GTAGGGTCCAATGAGGACCTTGACAAGCTCGAGGCACTCTCGGAGCAATCGCACGTTGTCATCTCTTGCGCAGAC
TCGGACAACACACCCCCGATGGAGGCGATCCTGCGAGGCTTGAGGAAGCGGCACGCATCGACTGGCGATCTTCCC
ATCCTGATCCACACCTCGGGCACAGGCGTGATTGCCACGCCAGCCAAGGGCATGTTCGCCTCGGACTTGATCTAC
TCTGATACCGACGTCGCACAAATCAAATCCATTCCACCAACGGCGTTGCACAGAAATGTTGACCTCACTGTGATG
GACGCTGACGAACAAGGCTATGTGCGGACCTACATCATCGTGCCGTCGACCATCTACGGCCAGGCGAAGGGCCCT
TTATTCGATGCGGGTATCTCGAACCCAATTTCGATCTAG
Gene >RhoplFPRL280|509_3
CTCATCGTGAGATCTGTAGGCTACGTTGGTGGCTCGGTCCTCACACGCCTTCAGAACCACCCCAGCGCGAACACC
TTCGACATTACGGCGCTCGTACGATCTGCCGAGAAGGCAAAGGTGCTTCAGGAAAAATTCGGGGTCAAGACCGTC
GTAGGGTCCAATGAGGACCTTGACAAGCTCGAGGCACTCTCGGAGCAATCGCACGTTGTCATCTCTTGCGCAGAC
TCGGACAACACACCCCCGATGGAGGCGATCCTGCGAGGCTTGAGGAAGCGGCACGCATCGACTGGCGATCTTCCC
ATCCTGATCCACACCGTACGCGATCATAAGGCATCTGTCCTGGCACTTGGCGCTTATTATGATACTTGTAGTCGG
GCACAGGCGTGATTGCCACGCCAGCCAAGGGCATGTTCGCCTCGGACTTGATCTACTCTGATACCGACGTCGCAC
AAATCAAATCCATTCCACCAACGGCGTTGCACAGAAATGTTGACCTCACTGTGATGGACGCTGACGAACAAGGTG
CGTGCACGAGACCGTTTCCACAGCTGTGTACTCGCTCAGGCATGATTTCCAGGCTATGTGCGGACCTACATCATC
GTGCCGTCGACCATCTACGGCCAGGCGAAGGGCCCTTTATTCGATGCGGGTATCTCGAACCCAATTTCGATCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail