Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|435_5
Gene name
LocationNODE_435:4761..6445
Strand-
Gene length (bp)1684
Transcript length (bp)732
Coding sequence length (bp)732
Protein length (aa) 244

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 87 106 19
4 123 145 22
5 160 179 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|435_5
MSTPTVIAIEAHQIQESFGAIFIGSFISMILFGLGIAQLYIYRGRFTCDRRALRYFVLFIFLLDTASAIFTAWWM
YYLFVSNWGDAGIFLTGNWCGAFAGGAIFLVVKKLADIATNVIRPAGIVWLLSAAIGDIMIAASISWFLQSHKSG
FKASDQLLDRVIRGLLTATIAVIDLILFLSSDKPNHIDLLTTLVLTKPPEVLVHVEAHQMVDIVKQDAEWTQGPQ
HAMDVSKSDPGWAGCSQN*
Coding >RhoplFPRL280|435_5
ATGTCGACTCCGACTGTTATTGCTATAGAGGCACACCAGATTCAAGAGAGTTTCGGCGCCATATTCATTGGTTCA
TTCATATCCATGATTCTGTTTGGCCTCGGCATAGCACAATTGTACATTTATCGTGGCCGATTCACCTGTGACCGA
AGAGCGTTAAGATACTTCGTCCTATTCATCTTCTTGCTGGATACTGCAAGCGCTATTTTCACCGCGTGGTGGATG
TACTATCTTTTTGTGTCCAACTGGGGTGATGCCGGGATATTTCTTACAGGGAATTGGTGCGGGGCTTTTGCGGGA
GGGGCAATCTTCCTTGTCGTGAAGAAGCTGGCAGACATTGCAACCAACGTCATCCGGCCAGCAGGCATTGTTTGG
CTGCTTTCAGCTGCAATTGGCGATATCATGATTGCAGCCTCAATAAGCTGGTTCCTCCAGAGTCATAAGTCCGGA
TTTAAGGCGTCCGATCAGCTTCTGGATAGGGTTATACGAGGGCTTTTGACCGCAACAATTGCTGTTATTGACCTG
ATTCTGTTCTTATCTTCAGACAAGCCCAACCATATCGACCTACTGACCACGCTCGTACTCACAAAGCCTCCTGAG
GTTCTTGTTCACGTCGAAGCACACCAGATGGTTGACATCGTGAAACAGGACGCTGAATGGACACAGGGACCACAG
CATGCCATGGACGTATCCAAGAGCGATCCCGGTTGGGCAGGTTGCAGCCAGAACTGA
Transcript >RhoplFPRL280|435_5
ATGTCGACTCCGACTGTTATTGCTATAGAGGCACACCAGATTCAAGAGAGTTTCGGCGCCATATTCATTGGTTCA
TTCATATCCATGATTCTGTTTGGCCTCGGCATAGCACAATTGTACATTTATCGTGGCCGATTCACCTGTGACCGA
AGAGCGTTAAGATACTTCGTCCTATTCATCTTCTTGCTGGATACTGCAAGCGCTATTTTCACCGCGTGGTGGATG
TACTATCTTTTTGTGTCCAACTGGGGTGATGCCGGGATATTTCTTACAGGGAATTGGTGCGGGGCTTTTGCGGGA
GGGGCAATCTTCCTTGTCGTGAAGAAGCTGGCAGACATTGCAACCAACGTCATCCGGCCAGCAGGCATTGTTTGG
CTGCTTTCAGCTGCAATTGGCGATATCATGATTGCAGCCTCAATAAGCTGGTTCCTCCAGAGTCATAAGTCCGGA
TTTAAGGCGTCCGATCAGCTTCTGGATAGGGTTATACGAGGGCTTTTGACCGCAACAATTGCTGTTATTGACCTG
ATTCTGTTCTTATCTTCAGACAAGCCCAACCATATCGACCTACTGACCACGCTCGTACTCACAAAGCCTCCTGAG
GTTCTTGTTCACGTCGAAGCACACCAGATGGTTGACATCGTGAAACAGGACGCTGAATGGACACAGGGACCACAG
CATGCCATGGACGTATCCAAGAGCGATCCCGGTTGGGCAGGTTGCAGCCAGAACTGA
Gene >RhoplFPRL280|435_5
ATGTCGACTCCGACTGTTATTGCTATAGAGGCACACCAGATTCAAGAGAGTTTCGGCGCCATATTCATTGGTAAG
GTTCAGCGTTGTCTGACAAGCTACTCTTTGCTACTACAATAGCCTTTAGGTTCATTCATATCCATGATTCTGTTT
GGCCTCGGCATAGCACAAGTGAGTTTCCAAACCCAACGTGAATGATTCTTGACTTTTTCTGTCAGTTGTACATTT
ATCGTGGCCGATTCACCTGGTGCGTGTGCTTCTATGATTGTCTCTTTATCGTGTTGAGATATCTGGTAGTGACCG
AAGAGCGTTAAGATACTTCGTCCTATTCATCTTCTTGCTGGATACTGCAAGCGCTATTTTCACCGCGTGGTGGTA
AGACCATTTCAATACTGGCAGACACATTTTCAAATCATAGCATCGTTGTAGGATGTACTATCTTTTTGTGTCCAA
CTGGGGTGATGCCGGGATATTTCTTACAGGGAATTGGTGTAAGTTCCTTCGTTGTACATGGGAACTTTAAAGGGC
TTAACAATTTCTCAGTGATGGCTACAAGTGTGTATCCATGTCTGCTCCACATAGAGAACGGCAGGCTCATCCCAT
TTGCGACCTTGCAGACCCTTTCATACTTGTGAGAACACTAGAAAAAGAAATCAAATGTTTCACTCAATTCTATGT
TTAATAGGGAACTATGGGATGTGCAAATCACTTCTTTTTTGCATGGAGAATTAGAGTTCTTATGCCAAAGACATG
GCTATCTGTCGCTATTTGCTTTCTTGGCATCGCAACATTGGGTGAGTGCACTGTTTACAATTCAGTTTATGCAGC
CAATACAGCTGCTTTTTCAGGCGGGGCTTTTGCGGGAGGGGCAATCTTCCTTGTCGTGAAGAAGCTGGCAGACAT
TGCAACCAACGTCATCCGGCCAGCAGGCATTGTTTGGCTGCTTTCAGCTGCAATTGGCGATATCATGATTGCAGC
CTCAATAAGCTGGTTCCTCCAGAGTCATAAGTCCGGATTTAAGGCGTCCGATCAGCTTCTGGATAGGGTTATACG
AGGTTTGCTCGCTTTACATTTCACTGTCCGTGACCATTTTGAACCTGGTAAAAAACAGTGACGGTTACCAATGGT
GCTCTATATACTGTTCATTCAGTTGTTTGTTTATTCATGATAAATGCAGGGCTTTTGACCGCAACAATTGCTGTT
ATTGACCTGATTCTGTTCTTATCTTCAGTGAGAATGTTCTGGCTATACCGCACGAATCATTTACTAATGTGTATT
TAGGACAAGCCCAACCATATCGGTGAGCCTCTAGATATCCTGGCATCATTATTCACCTTTCTGGACCGCCAACAG
CGATCGCAATAATCCTGCCCAGGGTGTATACAAACACAATTCTGGCCTCGCTGAACTCGCGCGAGCCTGAACGTT
CTATGTCTTCGATAGGACGATATTCCTCTGCCACCGTTCCTTCCTCTCGTTGCATGGTATGACTTATAATTTCGT
ACTCATTACCAAAGACCTACTGACCACGCTCGTACTCACAAAGCCTCCTGAGGTTCTTGTTCACGTCGAAGCACA
CCAGATGGTTGACATCGTGAAACAGGACGCTGAATGGACACAGGGACCACAGCATGCCATGGACGTATCCAAGAG
CGATCCCGGTTGGGCAGGTTGCAGCCAGAACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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