Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|2_15
Gene name
LocationNODE_2:9807..12283
Strand+
Gene length (bp)2476
Transcript length (bp)1506
Coding sequence length (bp)1506
Protein length (aa) 502

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 1.8E-24 39 287

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.999769

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH18 3.1E-24 38 366

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup304
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|011100
Agaricus bisporus var bisporus H39 AgabiH39|011110
Agaricus bisporus var bisporus H39 AgabiH39|035190
Agaricus bisporus var bisporus H39 AgabiH39|081510
Agaricus bisporus var bisporus H39 AgabiH39|081540
Agaricus bisporus var bisporus H97 AgabiH97|011100
Agaricus bisporus var bisporus H97 AgabiH97|011110
Agaricus bisporus var bisporus H97 AgabiH97|035190
Agaricus bisporus var bisporus H97 AgabiH97|081510
Agaricus bisporus var bisporus H97 AgabiH97|081540
Rhodonia placenta FPRL280 RhoplFPRL280|2_15 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|28_25
Rhodonia placenta FPRL280 RhoplFPRL280|33_20

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|2_15
MSSSSQLRALSLGSLLLAALSTLRVAAFDVSLYDNVSPYWGQDSYGATHTDSANFQQPISYYCQDDAIDVIPIAF
VDTFFGTGNYPVINLANTCNTTDNEYFSGTELLNCSFLASDIEYCQSQGKIVTISLGGAGGGVGFSNDSEAQSFA
DTIWDIFLGGSSSDRPFGSAVLDGIDLDIEGGSDTGYGAFITQLRTHFTGASKSYYISGAPQCEYPDQYLGSALN
SAWFDMVFVQFYNNPCGLQNFGEASGWDFGLWDYWARNTAINPNVKIFIGAPASSTASGTGYQSIDNLSSIARVT
RNSFPSFGGVMLWDASQAYANDRYDLAIKNALVAAGSTGFTYPPCDAQAYTSGSDYSGGTNVSYDGYVYITKYYA
SDTPSANYNGDWMPVSACSGGTAGSSTGSGSSSSSAASSTATTGTGNCAGVSEWSSSTAYTGGSQVQYNGDLWTA
QYWTENDTPGGSAGVWTNDGACSSSDVAARALHAPTPAPVAPRRSSRFFRL*
Coding >RhoplFPRL280|2_15
ATGTCCTCTTCATCTCAACTCCGTGCTCTGTCTCTCGGCAGCCTTCTTCTTGCAGCCCTTAGCACCCTCAGGGTT
GCCGCGTTCGACGTCAGTTTGTATGATAATGTAAGTCCATACTGGGGCCAGGATTCCTATGGCGCTACTCATACC
GACAGTGCGAACTTCCAGCAACCGATATCCTACTACTGTCAAGACGATGCTATCGACGTCATCCCGATAGCGTTC
GTGGACACGTTCTTTGGCACCGGCAACTATCCCGTGATTAACCTGGCGAACACTTGCAACACCACCGATAACGAG
TACTTCTCTGGGACCGAGCTCTTGAACTGCTCCTTCCTGGCGTCGGACATTGAGTATTGCCAGAGCCAGGGCAAG
ATCGTCACCATCAGTCTTGGAGGCGCTGGTGGGGGTGTCGGGTTCTCCAATGACAGCGAGGCGCAGTCATTTGCA
GACACAATCTGGGACATCTTTTTGGGAGGATCGAGCTCCGACAGGCCCTTCGGTAGCGCTGTCCTCGACGGTATT
GACCTCGACATCGAGGGCGGGTCGGACACCGGCTATGGTGCCTTCATTACTCAGCTTCGTACCCATTTTACTGGA
GCTAGCAAAAGCTACTATATAAGCGGCGCCCCCCAGTGCGAGTACCCCGATCAGTATCTCGGAAGTGCTCTCAAC
AGTGCCTGGTTTGATATGGTTTTTGTCCAATTTTACAACAACCCCTGCGGGCTGCAGAACTTCGGCGAGGCATCT
GGATGGGACTTTGGTCTCTGGGACTACTGGGCACGGAACACAGCCATTAACCCGAACGTCAAGATCTTCATTGGC
GCACCTGCATCGAGCACGGCTTCTGGAACTGGCTACCAATCCATTGACAACCTGTCCAGCATCGCGAGGGTCACT
CGCAACTCGTTCCCCTCATTTGGAGGCGTCATGCTGTGGGATGCTTCTCAGGCTTACGCCAATGACCGCTACGAC
CTTGCCATCAAGAATGCGCTTGTGGCCGCCGGCAGCACGGGCTTCACCTACCCGCCTTGTGATGCTCAGGCGTAC
ACTAGTGGCTCGGATTACTCAGGTGGTACTAACGTGTCCTACGATGGGTACGTATATATTACCAAGTACTATGCC
TCTGACACGCCCTCCGCCAACTATAACGGCGATTGGATGCCAGTGAGCGCGTGCTCTGGCGGGACTGCCGGTTCA
TCGACCGGCTCAGGCTCTTCCTCCTCCTCCGCGGCGTCCTCCACAGCCACGACCGGCACGGGCAACTGCGCAGGC
GTCTCCGAGTGGTCAAGTAGCACGGCGTACACGGGCGGCTCACAGGTGCAATACAACGGCGACCTCTGGACCGCG
CAATACTGGACCGAGAATGACACTCCTGGCGGTTCTGCGGGTGTGTGGACCAACGATGGCGCTTGCAGCTCCAGC
GACGTTGCCGCACGCGCACTGCACGCGCCCACGCCCGCGCCTGTCGCGCCGCGGAGGAGCTCTCGCTTCTTCCGC
TTATGA
Transcript >RhoplFPRL280|2_15
ATGTCCTCTTCATCTCAACTCCGTGCTCTGTCTCTCGGCAGCCTTCTTCTTGCAGCCCTTAGCACCCTCAGGGTT
GCCGCGTTCGACGTCAGTTTGTATGATAATGTAAGTCCATACTGGGGCCAGGATTCCTATGGCGCTACTCATACC
GACAGTGCGAACTTCCAGCAACCGATATCCTACTACTGTCAAGACGATGCTATCGACGTCATCCCGATAGCGTTC
GTGGACACGTTCTTTGGCACCGGCAACTATCCCGTGATTAACCTGGCGAACACTTGCAACACCACCGATAACGAG
TACTTCTCTGGGACCGAGCTCTTGAACTGCTCCTTCCTGGCGTCGGACATTGAGTATTGCCAGAGCCAGGGCAAG
ATCGTCACCATCAGTCTTGGAGGCGCTGGTGGGGGTGTCGGGTTCTCCAATGACAGCGAGGCGCAGTCATTTGCA
GACACAATCTGGGACATCTTTTTGGGAGGATCGAGCTCCGACAGGCCCTTCGGTAGCGCTGTCCTCGACGGTATT
GACCTCGACATCGAGGGCGGGTCGGACACCGGCTATGGTGCCTTCATTACTCAGCTTCGTACCCATTTTACTGGA
GCTAGCAAAAGCTACTATATAAGCGGCGCCCCCCAGTGCGAGTACCCCGATCAGTATCTCGGAAGTGCTCTCAAC
AGTGCCTGGTTTGATATGGTTTTTGTCCAATTTTACAACAACCCCTGCGGGCTGCAGAACTTCGGCGAGGCATCT
GGATGGGACTTTGGTCTCTGGGACTACTGGGCACGGAACACAGCCATTAACCCGAACGTCAAGATCTTCATTGGC
GCACCTGCATCGAGCACGGCTTCTGGAACTGGCTACCAATCCATTGACAACCTGTCCAGCATCGCGAGGGTCACT
CGCAACTCGTTCCCCTCATTTGGAGGCGTCATGCTGTGGGATGCTTCTCAGGCTTACGCCAATGACCGCTACGAC
CTTGCCATCAAGAATGCGCTTGTGGCCGCCGGCAGCACGGGCTTCACCTACCCGCCTTGTGATGCTCAGGCGTAC
ACTAGTGGCTCGGATTACTCAGGTGGTACTAACGTGTCCTACGATGGGTACGTATATATTACCAAGTACTATGCC
TCTGACACGCCCTCCGCCAACTATAACGGCGATTGGATGCCAGTGAGCGCGTGCTCTGGCGGGACTGCCGGTTCA
TCGACCGGCTCAGGCTCTTCCTCCTCCTCCGCGGCGTCCTCCACAGCCACGACCGGCACGGGCAACTGCGCAGGC
GTCTCCGAGTGGTCAAGTAGCACGGCGTACACGGGCGGCTCACAGGTGCAATACAACGGCGACCTCTGGACCGCG
CAATACTGGACCGAGAATGACACTCCTGGCGGTTCTGCGGGTGTGTGGACCAACGATGGCGCTTGCAGCTCCAGC
GACGTTGCCGCACGCGCACTGCACGCGCCCACGCCCGCGCCTGTCGCGCCGCGGAGGAGCTCTCGCTTCTTCCGC
TTATGA
Gene >RhoplFPRL280|2_15
ATGTCCTCTTCATCTCAACTCCGTGCTCTGTCTCTCGGCAGCCTTCTTCTTGCAGCCCTTAGCACCCTCAGGGTT
GCCGCGTTCGACGTCAGTTTGTATGATAATGTAAGTCCGTAGCTTGTATCCATAGCTCCATGTTGATCGGTATCG
CACTATGTCTAGGTTGCTGTGTAAGTCTCCTGCAATCGTCGATCAATAGCAGTGCCTTGACAACGGCGCAGATAC
TGGGGCCAGGATTCCTATGGCGCTACTCATACCGACAGTGCGAACTTCCAGCAACCGATATCCTACTACTGTCAA
GTGAGTTGGCCTTGGCTCTTCCGGACTTTACGCTTACTAGGGCCTCATTAGGACGATGCTATCGACGTCATCCCG
ATAGCGTTCGTGGACACGTTCTTTGGCACCGGCAACTATCCCGTGATTAACCTGGCGAACGTACGTCCGAAACTA
CAAAAGTGGCCCTCTGGCTCTGATGTCTCCTACGTTTAGACTTGCAACACCACCGATAACGAGTACTTCTCTGGG
ACCGAGCTCTTGAACTGCTCCTTCCTGGCGTCGGACATTGAGTATTGCCAGAGCCAGGGCAAGATCGTCACCATC
AGTCTTGGAGGCGCTGGTGGGGGTGTCGGGTTCTCCAATGACAGCGAGGCGCAGTCATTTGCAGACACAATCTGG
GACATCTTTTTGGGAGGATCGAGCTCCGACAGGCCCTTCGGTAGCGCTGTCCTCGACGGGTACGTTCATACATTT
GAGTTTTATGCGCCGTGCTGACAATTTACAGTATTGACCTCGACATCGAGGGCGGGTCGGACACCGGCTATGGTG
CCTTCATTACTCAGCTTCGTACCCATTTTACTGGAGCTAGCAAAAGGTACGCTGCAGTCTCATTTGGGCAACTCA
CGTAGTAACTGACGTCGTTGCAGCTACTATATAAGCGGCGCCCCCCAGTGCGAGTACCCCGATCAGTATCTCGGA
AGTGCTCTCAACAGTGCCTGGTTTGATATGGTTTTTGTCCAATTTTGTAAGTCTGGTTCCTTGCGCAAACTCCGC
GATGCTGACTTCGATCGGAGACAACAACCCCTGCGGGCTGCAGAACTTCGGCGAGGCATCTGTGCGTATGACATC
ATTGTGCTACGACCACCTTGTGTGACTGACGCCATCGATCGACCCCAGGGATGGGACTTTGGTCTCTGGTATGGA
GATCTCCGTATCGATCTGGATCATTCGCATAACCAGACTCTCTATGCTTCAGGGACTACTGGGCACGGAACACAG
CCATTAACCCGAACGTCAAGATCTTCATTGGCGCACCTGCATCGAGCACGGCTTCTGGAACTGGCTACCAATCCA
TTGACAACCTGTCCAGCATCGCGAGGGTCACTCGCAACTCGTTCCCCTCATTTGGAGGCGTCATGCTGTGGGATG
CTTCTCAGGCTTACGGTGTGTTTTACAAATTTGCCCCCGAAATGTACAGGAACTCACTATCTGCAGCCAATGACC
GCTACGACCTTGCCATCAAGAATGCGCTTGTGGCCGCCGGCAGCACGGGCTTCACCTACCCGCCTTGTGATGCTC
AGGCGTACACTAGTGGCTCGGATTACTCAGGTGGTACTAACGTGTCCTACGATGGGTACGTATATATTTTTGCCG
CAGATGTAGGATCGCGAACCTCTAGTGTTTTACACCTTCTTTTCCCCATCGCGGAGGAGGGGCCTCTAAGACCTC
GTCTACCCCGTCGTGGTGCTATCGGCATCTGTGCCATCGTTCAACTTCCTATTATCCGAATCCTCCGCGCAAGAA
TACATTTGCTAATTTGTATTTGTCTTGTTACGCCCAGGTACATCTGGGAGGTTCGTTGCCCTACTAAGTGACATG
CTTCACATGCTAATCTTCTCTATCTATAGACCAAGTACTATGCCTCTGACACGCCCTCCGCCAACTATAACGGCG
ATTGGATGCCAGGTCAGTCATTTCCTCTGACACTACGCGCTCTGTGACTCAATCGTATTATTCGTGCAGTGAGCG
CGTGCTCTGGCGGGACTGCCGGTTCATCGACCGGCTCAGGCTCTTCCTCCTCCTCCGCGGCGTCCTCCACAGCCA
CGACCGGCACGGGCAACTGCGCAGGCGTCTCCGAGTGGTCAAGTAGCACGGCGTACACGGGCGGCTCACAGGTGC
AATACAAGTGCGTCGTCCGTCCTCGCAGCAGCAACATGGTCTGTTGATACTCTACCACTCCAATCAAGCGGCGAC
CTCTGGACCGCGCAATACTGGACCGAGAATGACACTCCTGGCGGTAAGCTGCAGCCGCTCCCTTATCACCCGACG
TCTGACGCGATGCCTAATCCTTACAGGTTCTGCGGGTGTGTGGACCAACGATGGCGCTTGCAGCTCCAGCGACGT
TGCCGCACGCGCACTGCACGCGCCCACGCCCGCGCCTGTCGCGCCGCGGAGGAGCTCTCGCTTCTTCCGCTTATG
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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