Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|28_25
Gene name
LocationNODE_28:82856..84921
Strand+
Gene length (bp)2065
Transcript length (bp)1428
Coding sequence length (bp)1428
Protein length (aa) 476

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 1.4E-14 51 304

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 26 0.999722

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH18 1.7E-17 34 323

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup304
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|011100
Agaricus bisporus var bisporus H39 AgabiH39|011110
Agaricus bisporus var bisporus H39 AgabiH39|035190
Agaricus bisporus var bisporus H39 AgabiH39|081510
Agaricus bisporus var bisporus H39 AgabiH39|081540
Agaricus bisporus var bisporus H97 AgabiH97|011100
Agaricus bisporus var bisporus H97 AgabiH97|011110
Agaricus bisporus var bisporus H97 AgabiH97|035190
Agaricus bisporus var bisporus H97 AgabiH97|081510
Agaricus bisporus var bisporus H97 AgabiH97|081540
Rhodonia placenta FPRL280 RhoplFPRL280|2_15
Rhodonia placenta FPRL280 RhoplFPRL280|28_25 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|33_20

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|28_25
MVSGRSSYAAALGLSVLASSLLSVRAYDNSRSDNVRIYWGQNSYGATGSNTADYQKNLSYYCQDDVINAFPLAFL
NVFFGEGGEPSLDLANICSTANDPVFEGTQLPECSFMASNIQTCQNAGKIVTISLGGATGSAGFSNASQAEGFAN
TIWNLFLGGSSSTRPFGDAVLDGVDLDIEGGSTEYFTNFVSTLRSLMNSGSKSVIDAESFDAVYVQFCEHTEHPY
NNYCGLTNYDNSNDWDFSTWDNWAKNTSPNPNVKVYIGAPAASAAAGSGYVDAATLGQIAVDTRNSYSSFGGIML
WDASQAYANDRFDAAVKSSITENGNTAPAPSTTYSSATSTATATPTTAPAPSTTSTPAAPSSSPTGSAGDCAGVA
TWVANVAYEGGDQVVYNGNLYTAKWWSYADTPGGSAGDWTEDGACGASSDATAVKVAYQSKVAPTNVGPKVAAVP
NLSLSSALAAQTAPPSRRNSRFFRY*
Coding >RhoplFPRL280|28_25
ATGGTTTCCGGTCGGTCTTCATACGCCGCTGCTCTTGGCTTGTCGGTCTTGGCCTCTAGCCTTCTATCGGTCAGA
GCTTACGACAACAGTCGATCGGACAACGTGCGTATCTACTGGGGCCAAAACTCCTATGGGGCGACGGGCAGCAAT
ACTGCTGATTACCAGAAGAACCTGTCCTACTACTGCCAGGATGACGTGATCAACGCGTTCCCTCTCGCGTTCCTC
AACGTTTTCTTCGGCGAGGGCGGAGAGCCATCCCTCGACCTGGCCAACATTTGCAGCACCGCAAATGACCCGGTC
TTCGAGGGCACGCAGCTGCCCGAGTGCAGCTTCATGGCGTCCAACATCCAGACGTGCCAGAACGCAGGCAAGATC
GTGACCATCAGCCTCGGTGGCGCGACCGGCTCGGCCGGCTTCAGCAATGCGAGCCAGGCGGAGGGCTTTGCGAAC
ACGATCTGGAACCTATTCCTCGGAGGCTCCAGCAGCACGCGTCCGTTTGGCGATGCTGTGCTGGATGGGGTTGAC
CTCGATATCGAGGGCGGCTCCACGGAGTACTTTACCAACTTCGTCTCCACGCTCCGCTCCCTGATGAATTCAGGA
AGTAAGAGCGTCATCGACGCGGAGTCGTTCGACGCGGTCTACGTGCAGTTTTGTGAGCACACCGAACACCCATAT
AACAACTATTGCGGGCTGACCAACTACGACAACTCGAACGACTGGGATTTCAGCACATGGGACAACTGGGCGAAG
AACACGTCACCCAACCCCAACGTGAAGGTCTATATCGGAGCCCCTGCCGCCTCCGCGGCCGCTGGATCGGGCTAC
GTCGACGCGGCAACGCTCGGCCAGATTGCCGTCGACACGCGCAACTCGTACTCGTCGTTCGGCGGCATCATGCTG
TGGGACGCCTCTCAGGCATACGCAAACGACCGCTTTGACGCGGCAGTCAAGAGCTCGATCACGGAGAACGGGAAC
ACGGCGCCAGCGCCGAGCACGACATACTCCTCCGCGACGTCGACGGCCACGGCCACGCCTACGACTGCACCTGCG
CCCTCGACGACCTCCACGCCCGCCGCTCCCAGCAGCTCGCCGACAGGCAGCGCAGGGGACTGCGCGGGCGTCGCC
ACCTGGGTCGCGAACGTCGCCTATGAGGGCGGCGACCAGGTCGTGTACAACGGCAATCTCTACACTGCCAAGTGG
TGGAGCTACGCGGATACCCCCGGCGGATCCGCCGGGGACTGGACCGAGGACGGGGCGTGTGGCGCGTCCAGCGAC
GCGACGGCCGTCAAGGTCGCCTACCAGAGCAAGGTCGCGCCCACGAACGTCGGGCCCAAGGTGGCGGCCGTGCCG
AACCTCTCCCTGTCGTCCGCGCTCGCCGCGCAGACAGCACCTCCGTCGCGGAGGAACTCGCGTTTCTTCCGATAC
TGA
Transcript >RhoplFPRL280|28_25
ATGGTTTCCGGTCGGTCTTCATACGCCGCTGCTCTTGGCTTGTCGGTCTTGGCCTCTAGCCTTCTATCGGTCAGA
GCTTACGACAACAGTCGATCGGACAACGTGCGTATCTACTGGGGCCAAAACTCCTATGGGGCGACGGGCAGCAAT
ACTGCTGATTACCAGAAGAACCTGTCCTACTACTGCCAGGATGACGTGATCAACGCGTTCCCTCTCGCGTTCCTC
AACGTTTTCTTCGGCGAGGGCGGAGAGCCATCCCTCGACCTGGCCAACATTTGCAGCACCGCAAATGACCCGGTC
TTCGAGGGCACGCAGCTGCCCGAGTGCAGCTTCATGGCGTCCAACATCCAGACGTGCCAGAACGCAGGCAAGATC
GTGACCATCAGCCTCGGTGGCGCGACCGGCTCGGCCGGCTTCAGCAATGCGAGCCAGGCGGAGGGCTTTGCGAAC
ACGATCTGGAACCTATTCCTCGGAGGCTCCAGCAGCACGCGTCCGTTTGGCGATGCTGTGCTGGATGGGGTTGAC
CTCGATATCGAGGGCGGCTCCACGGAGTACTTTACCAACTTCGTCTCCACGCTCCGCTCCCTGATGAATTCAGGA
AGTAAGAGCGTCATCGACGCGGAGTCGTTCGACGCGGTCTACGTGCAGTTTTGTGAGCACACCGAACACCCATAT
AACAACTATTGCGGGCTGACCAACTACGACAACTCGAACGACTGGGATTTCAGCACATGGGACAACTGGGCGAAG
AACACGTCACCCAACCCCAACGTGAAGGTCTATATCGGAGCCCCTGCCGCCTCCGCGGCCGCTGGATCGGGCTAC
GTCGACGCGGCAACGCTCGGCCAGATTGCCGTCGACACGCGCAACTCGTACTCGTCGTTCGGCGGCATCATGCTG
TGGGACGCCTCTCAGGCATACGCAAACGACCGCTTTGACGCGGCAGTCAAGAGCTCGATCACGGAGAACGGGAAC
ACGGCGCCAGCGCCGAGCACGACATACTCCTCCGCGACGTCGACGGCCACGGCCACGCCTACGACTGCACCTGCG
CCCTCGACGACCTCCACGCCCGCCGCTCCCAGCAGCTCGCCGACAGGCAGCGCAGGGGACTGCGCGGGCGTCGCC
ACCTGGGTCGCGAACGTCGCCTATGAGGGCGGCGACCAGGTCGTGTACAACGGCAATCTCTACACTGCCAAGTGG
TGGAGCTACGCGGATACCCCCGGCGGATCCGCCGGGGACTGGACCGAGGACGGGGCGTGTGGCGCGTCCAGCGAC
GCGACGGCCGTCAAGGTCGCCTACCAGAGCAAGGTCGCGCCCACGAACGTCGGGCCCAAGGTGGCGGCCGTGCCG
AACCTCTCCCTGTCGTCCGCGCTCGCCGCGCAGACAGCACCTCCGTCGCGGAGGAACTCGCGTTTCTTCCGATAC
TGA
Gene >RhoplFPRL280|28_25
ATGGTTTCCGGTCGGTCTTCATACGCCGCTGCTCTTGGCTTGTCGGTCTTGGCCTCTAGCCTTCTATCGGTCAGA
GCTTACGACAACAGTCGATCGGACAACGTGCGTATCCGCGAACCTTGCCGTCTTTTGTGAAACTAATGGATGTTT
CTTGTGCAGCTCGCCGTGTAAGTATCATAACATAGACTATATGCGCAGGTTCTTATGCCTTGATCCAGCTACTGG
GGCCAAAACTCCTATGGGGCGACGGGCAGCAATACTGCTGATTACCAGAAGAACCTGTCCTACTACTGCCAGGTA
TGTTGCATTCATTGACCTCCACAAACGTCGAGTGACCCATAATACCATGTAGGATGACGTGATCAACGCGTTCCC
TCTCGCGTTCCTCAACGTTTTCTTCGGCGAGGGCGGAGAGCCATCCCTCGACCTGGCCAACGTCCGTCGCCTCTC
CCTGCGCTCTGCACGCGTCTTGCTGACTATATGCGTTCCAGATTTGCAGCACCGCAAATGACCCGGTCTTCGAGG
GCACGCAGCTGCCCGAGTGCAGCTTCATGGCGTCCAACATCCAGACGTGCCAGAACGCAGGCAAGATCGTGACCA
TCAGCCTCGGTGGCGCGACCGGCTCGGCCGGCTTCAGCAATGCGAGCCAGGCGGAGGGCTTTGCGAACACGATCT
GGAACCTATTCCTCGGAGGCTCCAGCAGCACGCGTCCGTTTGGCGATGCTGTGCTGGATGGGTGAGCATGGATTC
GCTGAAAAAAGAGAGGTGGTCGCTCACGAGTGTGATAGGGTTGACCTCGATATCGAGGGCGGCTCCACGGAGTAC
TTTACCAACTTCGTCTCCACGCTCCGCTCCCTGATGAATTCAGGAAGTAAGAGGTGTGTGTGATTCAAGTTGTGC
CCCGTCGCCATCGTAGAGTAACGTCGTTCTCCAGCTACTACCTGACGGCTGCCCCGCAATGCCCCTTCCCTGACG
CATACGTCGGAAGGTCAGTCGATCGCGTTGAGGGCGCATACATGTAGATGCTGACACTCATACCAGCGTCATCGA
CGCGGAGTCGTTCGACGCGGTCTACGTGCAGTTTTGTGAGCACACCGAACACCCATGCGGACTCATCGGTCTCAC
ATATCACCCCAGATAACAACTATTGCGGGCTGACCAACTACGACAACTCGAACGACTGGGATTTCAGCACATGGT
GGGTGCCCAGCTCGGTCGCATCCTGGACACCAGCTGACGAGACGTTCCAGGGACAACTGGGCGAAGAACACGTCA
CCCAACCCCAACGTGAAGGTCTATATCGGAGCCCCTGCCGCCTCCGCGGCCGCTGGATCGGGCTACGTCGACGCG
GCAACGCTCGGCCAGATTGCCGTCGACACGCGCAACTCGTACTCGTCGTTCGGCGGCATCATGCTGTGGGACGCC
TCTCAGGCATACGGTACGTGGAGTGCCTCGTCGCCCGCGCGAGAAATCACACGCTGATCAGAGACCCGCACGCAG
CAAACGACCGCTTTGACGCGGCAGTCAAGAGCTCGATCACGGAGAACGGGAACACGGCGCCAGCGCCGAGCACGA
CATACTCCTCCGCGACGTCGACGGCCACGGCCACGCCTACGACTGCACCTGCGCCCTCGACGACCTCCACGCCCG
CCGCTCCCAGCAGCTCGCCGACAGGCAGCGCAGGGGACTGCGCGGGCGTCGCCACCTGGGTCGCGAACGTCGCCT
ATGAGGGCGGCGACCAGGTCGTGTACAACGGCAATCTCTACACTGCCAAGTGGTGGAGCTACGCGGATACCCCCG
GCGGTGCGTCTCTCGGCTCGATACAGGGTTAGGACGCCTGACTGATCGTATTTTTCGGCCAGGATCCGCCGGGGA
CTGGACCGAGGACGGGGCGTGTGGCGCGTCCAGCGACGCGACGGCCGTCAAGGTCGCCTACCAGAGCAAGGTCGC
GCCCACGAACGTCGGGCCCAAGGTGGCGGCCGTGCCGAACCTCTCCCTGTCGTCCGCGCTCGCCGCGCAGACAGC
ACCTCCGTCGCGGAGGAACTCGCGTTTCTTCCGATACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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