Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|233_5
Gene name
LocationNODE_233:6645..8193
Strand+
Gene length (bp)1548
Transcript length (bp)1044
Coding sequence length (bp)1044
Protein length (aa) 348

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 3.7E-10 13 98
PF05368 NmrA NmrA-like family 1.3E-04 10 83

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup152
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|071030
Agaricus bisporus var bisporus H39 AgabiH39|071040
Agaricus bisporus var bisporus H39 AgabiH39|083920
Agaricus bisporus var bisporus H97 AgabiH97|071030
Agaricus bisporus var bisporus H97 AgabiH97|071040
Agaricus bisporus var bisporus H97 AgabiH97|083920
Rhodonia placenta FPRL280 RhoplFPRL280|233_5 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|287_8
Rhodonia placenta FPRL280 RhoplFPRL280|335_4
Rhodonia placenta FPRL280 RhoplFPRL280|335_6
Rhodonia placenta FPRL280 RhoplFPRL280|335_7
Rhodonia placenta FPRL280 RhoplFPRL280|509_3
Rhodonia placenta FPRL280 RhoplFPRL280|594_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|233_5
MSKSFQTSVFFVGATGYIGGAVLTRILQHPDRPRLDITALVRSPEKAEKLEKLDITPVLGSLQDTGRLEDLASKA
DIVVACADADDLPAAQAILRGMARRRELTRDTPVLIHTIPVGVFSDNAAGMHPTSTIYSDADVEQMASLSPNQLH
RSIDLAVLDADSKGTIKAYIVLPSTIWGLASGPLIDAQIANPHSQQIPMLIKASLARAQAGMVGEGKNLWPNVNI
DEVADLFGLVFSAVRAGQPIGHGTDGYYIGENGEHMLYAVSRAIGEALVALGKASTDKVTTFSPEELDKYFGGSD
YLGTNVRCRAEHSRAIGWKPVKTTRHMLASVKLEIEAILQRPEELKV*
Coding >RhoplFPRL280|233_5
ATGTCTAAGTCGTTCCAAACCTCTGTCTTCTTCGTCGGGGCTACCGGCTACATAGGCGGTGCGGTCCTCACGCGC
ATCCTCCAGCATCCCGACCGCCCCAGGCTCGACATCACCGCCCTCGTCCGCTCCCCGGAGAAGGCCGAGAAGCTC
GAGAAGCTCGACATCACACCCGTTCTCGGCTCCCTCCAGGACACAGGCAGACTCGAGGATCTCGCGAGCAAGGCG
GACATTGTCGTTGCTTGCGCGGATGCGGATGACCTCCCTGCTGCTCAGGCTATTTTGCGTGGGATGGCGCGGAGG
AGGGAGCTCACGCGGGATACTCCCGTCCTCATCCATACAATACCTGTAGGTGTGTTCAGCGACAACGCTGCGGGG
ATGCACCCCACCTCGACCATCTACTCCGACGCCGACGTCGAGCAGATGGCCTCACTGTCGCCCAACCAACTGCAC
CGCAGCATCGACCTTGCGGTCCTCGACGCCGACAGCAAGGGCACGATCAAAGCCTACATCGTGCTCCCGTCGACG
ATCTGGGGCCTCGCGTCCGGCCCACTCATTGACGCGCAGATCGCGAATCCGCATTCGCAGCAGATCCCGATGCTC
ATCAAAGCGAGCCTTGCGCGTGCCCAGGCAGGCATGGTCGGCGAGGGCAAGAACTTGTGGCCGAACGTCAACATC
GACGAAGTGGCGGACCTGTTTGGGCTTGTGTTCAGCGCGGTGCGCGCCGGGCAGCCAATTGGACATGGCACGGAC
GGGTACTACATCGGCGAGAACGGCGAGCACATGCTGTACGCTGTGAGCCGCGCGATCGGCGAGGCGCTGGTTGCG
CTCGGCAAGGCGAGCACAGACAAGGTGACGACGTTCTCGCCGGAGGAGCTGGATAAGTACTTTGGCGGGTCGGAC
TATCTGGGAACGAATGTGCGCTGTCGCGCGGAGCATTCGCGCGCAATCGGGTGGAAGCCGGTGAAGACGACGCGA
CACATGCTCGCGAGTGTGAAGCTCGAGATCGAAGCTATCCTGCAGCGGCCGGAGGAGCTCAAGGTATAA
Transcript >RhoplFPRL280|233_5
ATGTCTAAGTCGTTCCAAACCTCTGTCTTCTTCGTCGGGGCTACCGGCTACATAGGCGGTGCGGTCCTCACGCGC
ATCCTCCAGCATCCCGACCGCCCCAGGCTCGACATCACCGCCCTCGTCCGCTCCCCGGAGAAGGCCGAGAAGCTC
GAGAAGCTCGACATCACACCCGTTCTCGGCTCCCTCCAGGACACAGGCAGACTCGAGGATCTCGCGAGCAAGGCG
GACATTGTCGTTGCTTGCGCGGATGCGGATGACCTCCCTGCTGCTCAGGCTATTTTGCGTGGGATGGCGCGGAGG
AGGGAGCTCACGCGGGATACTCCCGTCCTCATCCATACAATACCTGTAGGTGTGTTCAGCGACAACGCTGCGGGG
ATGCACCCCACCTCGACCATCTACTCCGACGCCGACGTCGAGCAGATGGCCTCACTGTCGCCCAACCAACTGCAC
CGCAGCATCGACCTTGCGGTCCTCGACGCCGACAGCAAGGGCACGATCAAAGCCTACATCGTGCTCCCGTCGACG
ATCTGGGGCCTCGCGTCCGGCCCACTCATTGACGCGCAGATCGCGAATCCGCATTCGCAGCAGATCCCGATGCTC
ATCAAAGCGAGCCTTGCGCGTGCCCAGGCAGGCATGGTCGGCGAGGGCAAGAACTTGTGGCCGAACGTCAACATC
GACGAAGTGGCGGACCTGTTTGGGCTTGTGTTCAGCGCGGTGCGCGCCGGGCAGCCAATTGGACATGGCACGGAC
GGGTACTACATCGGCGAGAACGGCGAGCACATGCTGTACGCTGTGAGCCGCGCGATCGGCGAGGCGCTGGTTGCG
CTCGGCAAGGCGAGCACAGACAAGGTGACGACGTTCTCGCCGGAGGAGCTGGATAAGTACTTTGGCGGGTCGGAC
TATCTGGGAACGAATGTGCGCTGTCGCGCGGAGCATTCGCGCGCAATCGGGTGGAAGCCGGTGAAGACGACGCGA
CACATGCTCGCGAGTGTGAAGCTCGAGATCGAAGCTATCCTGCAGCGGCCGGAGGAGCTCAAGGTATAA
Gene >RhoplFPRL280|233_5
ATGTCTAAGTCGTTCCAAACCTCTGTCTTCTTCGTCGGGGCTACCGGTAAGGATTCGCAGCACACGCGTTCACCT
CGTGGTGTCAGGCTCACACAATGGCACATTGCGTCATCTTAGGCTACATAGGCGGTGCGGTCCTCACGCGCATCC
TCCAGCATCCCGACCGCCCCAGGCTCGACATCACCGCCCTCGTCCGCTCCCCGGAGAAGGCCGAGAAGCTCGAGA
AGCTCGACATCACACCCGTTCTCGGCTCCCTCCAGGACACAGGCAGACTCGAGGATCTCGCGAGCAAGGCGGACA
TTGTCGTTGCTTGCGTGCGCCTTGTTTCTCTTGCTGGGTGTGGACTTGCCTGGTTGACACAGATGGCAGGCGGAT
GCGGATGACCTCCCTGCTGCTCAGGCTATTTTGCGTGGGATGGCGCGGAGGAGGGAGCTCACGCGGGATACTCCC
GTCCTCATCCATACAGTAAGCACCTCGTCTGCGATGTCACTCGGACCCTTCTTCACATGTCGCGCGCATACAGTC
TGGCACGGGTATGTTACACATCAGGCCATAGATGCGCCGCAGACGCCCGAGCTGAACTGGATACCTGTAGGTGTG
TTCAGCGACAACGCTGCGGGGATGCACCCCACCTCGACCATCTACTCCGACGCCGACGTCGAGCAGATGGCCTCA
CTGTCGCCCAACCAACTGCACCGCAGCATCGACCTTGCGGTCCTCGACGCCGACAGCAAGGGTGCGTCCTCCTTT
CTCTGCCTTGCTCCTTCCGCCTCTCCTGTCGGTTTCCATTCCGTTGACCACGCGCGCAGGCACGATCAAAGCCTA
CATCGTGCTCCCGTCGACGATCTGGGGCCTCGCGTCCGGCCCACTCATTGACGCGCAGATCGCGAATCCGCATTC
GCAGCAGATCCCGATGCTCATCAAAGCGAGCCTTGCGCGTGCCCAGGCAGGCATGGTCGGCGAGGGCAAGAACTT
GTGGCCGAACGTCAACATCGACGAAGGTACGTACGCGTCCTCTGCAGCCTCCTGTCGGGTTTTTCCTACCTGTTT
TTTTGCACATGTGTGTCCATCGCATATACCTTCCACTTCCTATTTGAAACACTGCTGACGTGTGCGCAGTGGCGG
ACCTGTTTGGGCTTGTGTTCAGCGCGGTGCGCGCCGGGCAGCCAATTGGACATGGCACGGACGGGTACTACATCG
GCGAGAACGGCGAGCACATGCTGTACGCTGTGAGCCGCGCGATCGGCGAGGCGCTGGTTGCGCTCGGCAAGGCGA
GCACAGACAAGGTGACGACGTTCTCGCCGGAGGAGCTGGATAAGTACTTTGGCGGGGTGAGTGCCGTATCCTTCT
CCTGCTCCATGGGGCAGATAGCGCTGATGTGCCTTGCGGTGGCAATAGTCGGACTATCTGGGAACGAATGTGCGC
TGTCGCGCGGAGCATTCGCGCGCAATCGGGTGGAAGCCGGTGAAGACGACGCGACACATGCTCGCGAGTGTGAAG
CTCGAGATCGAAGCTATCCTGCAGCGGCCGGAGGAGCTCAAGGTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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