Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|227_13
Gene name
LocationNODE_227:25449..26465
Strand+
Gene length (bp)1016
Transcript length (bp)645
Coding sequence length (bp)645
Protein length (aa) 215

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 66 88 22
3 103 125 22
4 137 159 22
5 174 196 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|227_13
MGSPAAVTYGPIFVGCVLNIVLYGIMITQTFLYFTVYKKYVVVQQSSRAASNHYHDRDKLWMKLFVGTLFLCDTL
NCAFDIAFVYVALVDGFDNPIGLDYASWVFPTIDPAMTAFIALFVQMFFAWRVKVLTNSIPAVLFVMFCSLFQWC
GGVGTAIAVGMIPEFVHFQRFEVIVIIWLAFSAVADSSITAALVWHLVRLGFLSFGTTRPLIAY*
Coding >RhoplFPRL280|227_13
ATGGGTTCTCCTGCGGCGGTAACTTATGGCCCCATCTTTGTTGGCTGTGTCCTCAACATCGTGTTGTACGGCATT
ATGATCACCCAAACATTCTTGTACTTCACCGTCTATAAGAAGTATGTCGTCGTGCAACAGTCTTCCCGCGCTGCG
TCTAATCACTACCATGACAGGGACAAATTATGGATGAAACTTTTCGTCGGAACTCTCTTCCTCTGCGATACACTT
AACTGCGCGTTCGACATCGCCTTCGTTTATGTCGCACTTGTGGACGGATTCGATAACCCCATTGGTCTTGACTAT
GCGTCATGGGTGTTTCCTACTATAGACCCGGCTATGACAGCATTCATTGCGCTTTTCGTTCAAATGTTCTTTGCG
TGGCGTGTCAAGGTTCTTACCAATAGTATCCCGGCCGTCCTGTTCGTCATGTTCTGCTCTCTGTTTCAATGGTGC
GGCGGCGTTGGCACGGCCATCGCTGTGGGCATGATTCCAGAGTTCGTTCACTTCCAGAGATTTGAGGTGATTGTC
ATCATCTGGCTGGCGTTCTCTGCCGTGGCGGACTCTTCTATCACAGCGGCTCTTGTCTGGCACCTTGTACGTCTA
GGATTCCTTTCATTTGGTACAACACGTCCACTAATAGCATACTGA
Transcript >RhoplFPRL280|227_13
ATGGGTTCTCCTGCGGCGGTAACTTATGGCCCCATCTTTGTTGGCTGTGTCCTCAACATCGTGTTGTACGGCATT
ATGATCACCCAAACATTCTTGTACTTCACCGTCTATAAGAAGTATGTCGTCGTGCAACAGTCTTCCCGCGCTGCG
TCTAATCACTACCATGACAGGGACAAATTATGGATGAAACTTTTCGTCGGAACTCTCTTCCTCTGCGATACACTT
AACTGCGCGTTCGACATCGCCTTCGTTTATGTCGCACTTGTGGACGGATTCGATAACCCCATTGGTCTTGACTAT
GCGTCATGGGTGTTTCCTACTATAGACCCGGCTATGACAGCATTCATTGCGCTTTTCGTTCAAATGTTCTTTGCG
TGGCGTGTCAAGGTTCTTACCAATAGTATCCCGGCCGTCCTGTTCGTCATGTTCTGCTCTCTGTTTCAATGGTGC
GGCGGCGTTGGCACGGCCATCGCTGTGGGCATGATTCCAGAGTTCGTTCACTTCCAGAGATTTGAGGTGATTGTC
ATCATCTGGCTGGCGTTCTCTGCCGTGGCGGACTCTTCTATCACAGCGGCTCTTGTCTGGCACCTTGTACGTCTA
GGATTCCTTTCATTTGGTACAACACGTCCACTAATAGCATACTGA
Gene >RhoplFPRL280|227_13
ATGGGTTCTCCTGCGGCGGTAACGTGCGCTGCCTGCTCTTCCTTCTCACGCTGGTCCTGACTGTAGCGCGATAGT
TATGGCCCCATCTTTGTTGGCTGTGTCCTCAACATCGTGTTGTACGGCATTATGATCACCCAAACATTCTTGTAC
TTCACCGTCTATAAGAAGTATGTCGTCGTGCAACAGTCTTCCCGCGCTGCGTCTAATCACTACCATGACAGGGAC
AAATTATGGATGAAACTTTTCGTAGGTGACAACCCTCCGTATGCAAGATCGTCTCATCATCGCATTCTTTAGGTC
GGAACTCTCTTCCTCTGCGATACACTTAACTGCGCGTTCGACATCGCCTTCGTTTATGTCGCACTTGTGGACGGA
TTCGGTAGGCCTAACAGATTCTAGAGATTAGGATGCGACGCTACATATTCTACAGATAACCCCATTGGTCTTGAC
TATGCGTCATGGGGTAAGCGCGATCTTTCCATATGCCATCAGACTACTGACCTACGCCCGTAGTTTTTGCAACGG
GTACGTTAAGCCCAAGTTGTGTCGACGTTGACATTCCTGATCAATGTTTCCTACTATAGACCCGGCTATGACAGT
AAGCACCTCTCGCTATGTTTGCGGTCAAGTCCTAATCTGAACTACTATGCAGGCATTCATTGCGCTTTTCGTTCA
AATGTTCTTTGCGTGGCGTGTCAAGGTTCTTACCAATAGTATCCCGGCCGTCCTGTTCGTCATGTTCTGCTCTCT
GTTTCAATGGTGTACGTCTCTACATTAGTTATTCTTGGTTGATCTCTAACAATTCTACATCAACAATAGGCGGCG
GCGTTGGCACGGCCATCGCTGTGGGCATGATTCCAGAGTTCGTTCACTTCCAGAGATTTGAGGTGATTGTCATCA
TCTGGCTGGCGTTCTCTGCCGTGGCGGACTCTTCTATCACAGCGGCTCTTGTCTGGCACCTTGTACGTCTAGGAT
TCCTTTCATTTGGTACAACACGTCCACTAATAGCATACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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