Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|214_10
Gene name
LocationNODE_214:35406..36599
Strand-
Gene length (bp)1193
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01764 Lipase_3 Lipase (class 3) 5.8E-25 83 224

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.712482

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup106
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|000340
Agaricus bisporus var bisporus H39 AgabiH39|001820
Agaricus bisporus var bisporus H39 AgabiH39|001830
Agaricus bisporus var bisporus H39 AgabiH39|063250
Agaricus bisporus var bisporus H39 AgabiH39|090410
Agaricus bisporus var bisporus H97 AgabiH97|000340
Agaricus bisporus var bisporus H97 AgabiH97|001820
Agaricus bisporus var bisporus H97 AgabiH97|001830
Agaricus bisporus var bisporus H97 AgabiH97|063250
Agaricus bisporus var bisporus H97 AgabiH97|090410
Rhodonia placenta FPRL280 RhoplFPRL280|214_10 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|283_4
Rhodonia placenta FPRL280 RhoplFPRL280|551_2
Rhodonia placenta FPRL280 RhoplFPRL280|551_3

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|214_10
MFALFFALPAFFTFFSPSTITTDLLRPALFARTAYCPTSTIVNWTCGAPCNALPGIQVFTAGGNQGTIPFFYVAS
DPQSQSIVVVHEGTDPADLLSVLNDIEFSQVNLNSTLFPNAGNDTLVHDGFQDTQGRTADTILSTVQSALASTGY
KNVLVTGHSLGAAVASLDAVMLKMALPSDVAINSVVFGLPRVGNAQWASLVDSLFPSFAHVTNQKDPVPTVPPQF
LSFVHPAGEAHITTHCSDSTELLDSDIQNHLGPYFDGVSFGSSASGCS*
Coding >RhoplFPRL280|214_10
ATGTTCGCTCTCTTCTTCGCGCTTCCAGCCTTCTTTACCTTCTTTTCTCCGAGCACGATTACTACAGATCTCCTC
CGTCCCGCGCTTTTCGCCCGTACCGCCTATTGCCCAACCAGCACTATTGTCAATTGGACCTGTGGAGCCCCGTGC
AATGCACTGCCTGGTATCCAAGTCTTCACCGCAGGCGGAAACCAGGGTACCATCCCATTCTTTTATGTTGCAAGC
GACCCGCAGTCGCAGAGCATTGTCGTGGTCCACGAGGGCACAGACCCAGCCGACCTATTATCAGTGTTGAATGAC
ATTGAGTTCTCCCAAGTGAATCTCAACAGCACCCTCTTCCCGAACGCTGGAAATGACACCCTCGTCCACGACGGC
TTCCAAGACACGCAGGGCCGAACAGCCGATACTATCCTCTCCACGGTGCAAAGTGCACTGGCCTCAACGGGCTAC
AAGAATGTGCTTGTGACGGGTCACTCACTTGGTGCGGCCGTAGCCTCTCTTGACGCGGTAATGCTCAAGATGGCG
CTGCCGAGCGACGTCGCGATCAACTCCGTCGTGTTTGGCCTTCCGCGCGTTGGGAATGCTCAATGGGCGTCCCTT
GTCGACAGCCTGTTCCCGAGCTTCGCGCACGTCACAAATCAGAAGGACCCCGTGCCGACCGTCCCGCCACAGTTC
CTCTCGTTCGTGCATCCGGCGGGCGAGGCTCATATAACCACCCATTGTTCGGACTCTACGGAGCTGCTGGATAGT
GACATCCAGAACCACCTGGGGCCGTACTTCGACGGGGTATCATTTGGCTCCTCCGCCTCGGGCTGTTCGTGA
Transcript >RhoplFPRL280|214_10
ATGTTCGCTCTCTTCTTCGCGCTTCCAGCCTTCTTTACCTTCTTTTCTCCGAGCACGATTACTACAGATCTCCTC
CGTCCCGCGCTTTTCGCCCGTACCGCCTATTGCCCAACCAGCACTATTGTCAATTGGACCTGTGGAGCCCCGTGC
AATGCACTGCCTGGTATCCAAGTCTTCACCGCAGGCGGAAACCAGGGTACCATCCCATTCTTTTATGTTGCAAGC
GACCCGCAGTCGCAGAGCATTGTCGTGGTCCACGAGGGCACAGACCCAGCCGACCTATTATCAGTGTTGAATGAC
ATTGAGTTCTCCCAAGTGAATCTCAACAGCACCCTCTTCCCGAACGCTGGAAATGACACCCTCGTCCACGACGGC
TTCCAAGACACGCAGGGCCGAACAGCCGATACTATCCTCTCCACGGTGCAAAGTGCACTGGCCTCAACGGGCTAC
AAGAATGTGCTTGTGACGGGTCACTCACTTGGTGCGGCCGTAGCCTCTCTTGACGCGGTAATGCTCAAGATGGCG
CTGCCGAGCGACGTCGCGATCAACTCCGTCGTGTTTGGCCTTCCGCGCGTTGGGAATGCTCAATGGGCGTCCCTT
GTCGACAGCCTGTTCCCGAGCTTCGCGCACGTCACAAATCAGAAGGACCCCGTGCCGACCGTCCCGCCACAGTTC
CTCTCGTTCGTGCATCCGGCGGGCGAGGCTCATATAACCACCCATTGTTCGGACTCTACGGAGCTGCTGGATAGT
GACATCCAGAACCACCTGGGGCCGTACTTCGACGGGGTATCATTTGGCTCCTCCGCCTCGGGCTGTTCGTGA
Gene >RhoplFPRL280|214_10
ATGTTCGCTCTCTTCTTCGCGCTTCCAGCCTTCTTTACCTTCTTTTCTCCGGTGCTTGCAGCTCCAATTCCCCTC
TTTGGTATTCATTTTGGCGACGACACAGAGGCAAACGGCACTCCAACCCCCGTTTCACAGAGCACGATTACTACA
GATCTCCTCCGTCCCGCGCTTTTCGCCCGTACCGCCTATTGCCCAACCAGCACTATTGTCAATTGGACCTGTGGA
GCCCCGTGCAATGCACTGCCTGGTATCCAAGTCTTCACCGCAGGCGGAAACCAGGGTACCATCCCATTCTGTGCG
TGTCTTCGTAACTCGAACGACAGCACCACTGATCGAGATAGTACAGTTTATGTTGCAAGCGACCCGCAGTCGCAG
AGCATTGTCGTGGTCCACGAGGGCACAGACCCAGCCGACCTATTATCAGTGTTGAATGACATTGAGTTCTCCCAA
GTGAATCTCAACAGCACCCTCTTCCCGAACGCTGGAAGTAAGTGATCGCTTCCATATCATGCGGCGTCAGCCTTG
ATCTCATCATTATCTGCAAGATGACACCCTCGTCCACGACGGCTTCCAAGACACGCAGGGCCGAACAGCCGATAC
TATCCTCTCCACGGTGCAAAGTGCACTGGCCTCAACGGGCTACAAGAATGTGCTTGTGACGGGTCACTCACTTGG
TGCGGCCGTAGCCTCTCTTGACGCGGTAATGCTCAAGATGGCGCTGCCGAGCGACGTCGCGATCAACTCCGTCGT
GTTTGGCCTTCCGCGCGTTGGGAATGCTCAATGGGCGTCCCTTGTCGACAGCCTGGTGCGGTTCATGGCTTCGCG
TCTGTCGCGTTTTTTGGCTCTGCTGCTGATCATTATCATCGTGCACAGTTCCCGAGCTTCGCGCACGTCACAAAT
CAGAAGGACCCCGTGCCGACCGTCCCGCCACAGTTCCTCTCGTTCGTGCATCCGGCGGGCGAGGCTCATATAACC
ACCGTGAGTGCGAGTACGGGCAACGCGACGATGGTGCAATGCCCTGGGCAAGAGAACGAGGCATGCCGCATCATT
TATTTGTCCTGCCCATCACTACTGACGTTGTAACATAGCATTGTTCGGACTCTACGGAGCTGCTGGATAGTGACA
TCCAGAACCACCTGGGGCCGTACTTCGACGGGGTATCATTTGGCTCCTCCGCCTCGGGCTGTTCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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