Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|19_4
Gene name
LocationNODE_19:33680..35879
Strand+
Gene length (bp)2199
Transcript length (bp)2148
Coding sequence length (bp)2148
Protein length (aa) 716

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 6.2E-37 61 273
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-21 315 436

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0005524 ATP binding Yes
GO:0032559 adenyl ribonucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0003674 molecular_function No
GO:0032553 ribonucleotide binding No
GO:0043167 ion binding No
GO:0043168 anion binding No
GO:0017076 purine nucleotide binding No
GO:0036094 small molecule binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|19_4
MSEEAALKETANSQQVTEPSTLPEAEEVDRASFASLKDKISLPTWTAITEKPFHLKTMSPVQEAVLPLLPQLAEP
FVEAGTGKRPARDLLVRAKTGTGKTLAFLVPAVEARLKAIEAAGNQGVQDAGLVQDKKLEVRVQRVYARTQIGTI
IISPTRELATQIANEAMRLTQHHDGFEVRLFIGGASKVRQMRDFMKGRRDIVVGTPGRLRDLLENEPEFTKAASQ
ANMLVLDEADTLLDMGFRDDLEAIINYMPKQPLRQTFMFSATVSTEIRQIARAALDKNHVFIDCVSDDAPPTHAH
IPQYHTVLPNAGEQLPHLLRLLAHDQLTNEKSKIIMFLPTTKMTQLFATVIRQLGATCLPSGKQTKIFEIHSKRS
QALRDNTSRDFRNDKSRASILISSDVSARGIDYPGVTRVIQVGVPTSSDQYIHRVGRTGRGMNTVGRADIVLLPW
EVGFVTWQLTHIPLKPLTTNELKKQVTELAKTYDATAPLEVKEQRNVLDRRGYPMPQPIWPYSPAHEKFNESITS
FVEKIDEEAVKEVMMSNLGYYIGRSGDLRVQRNVVVEGVKDWTVKTMGLPAPPYVSPAFLAKLGLAGGGEGRNNG
SRDSPSSFSRPGQRSWEGRGSQRSWEGRGSQRSDRRSDDRERGDSRGRFTNDRHDRRQQSSERDRHSFSDRDQRS
FSDRDQRPQFSERDRRPQFSDRRQQPYERERRPRSFGVAE*
Coding >RhoplFPRL280|19_4
ATGAGTGAGGAGGCCGCGCTCAAGGAAACAGCGAACAGCCAGCAAGTGACGGAACCGAGCACTCTTCCTGAGGCA
GAAGAGGTAGACCGGGCCTCGTTTGCATCGTTGAAGGATAAGATCTCGCTCCCGACCTGGACGGCTATAACAGAG
AAGCCCTTCCATCTCAAGACCATGTCGCCTGTCCAAGAAGCTGTCTTGCCTCTTTTGCCGCAGCTCGCCGAGCCG
TTCGTGGAAGCGGGCACGGGGAAGCGACCGGCTCGAGACTTACTCGTGCGGGCAAAGACGGGAACCGGAAAGACA
TTGGCCTTCCTTGTGCCTGCAGTCGAGGCGCGGCTGAAGGCTATCGAAGCTGCTGGCAACCAGGGAGTGCAGGAC
GCGGGTCTCGTTCAGGACAAGAAACTGGAAGTACGCGTGCAACGGGTGTACGCCCGCACCCAAATCGGTACAATC
ATCATCAGTCCTACGCGTGAGCTGGCAACGCAGATTGCGAATGAAGCCATGCGGTTGACGCAACACCACGACGGC
TTCGAGGTCAGGTTGTTCATCGGCGGTGCTAGCAAGGTTCGCCAGATGCGGGACTTCATGAAGGGCAGACGCGAC
ATCGTTGTAGGGACACCTGGCCGACTTCGAGATCTCCTGGAGAACGAGCCGGAGTTCACCAAGGCTGCATCGCAA
GCTAACATGCTGGTTCTGGACGAAGCGGACACACTCCTGGATATGGGCTTCCGTGATGACCTCGAGGCGATCATC
AACTACATGCCAAAGCAGCCACTGAGGCAGACGTTCATGTTCTCGGCTACGGTCTCGACGGAAATTCGGCAGATT
GCACGCGCTGCGCTGGACAAGAACCACGTCTTCATCGACTGTGTCTCCGATGACGCCCCGCCCACACACGCACAC
ATCCCGCAGTACCATACCGTACTCCCGAACGCAGGGGAACAGCTACCTCACCTCCTCCGCCTGCTTGCGCATGAC
CAGTTGACCAATGAGAAGTCGAAGATCATCATGTTCTTGCCCACCACAAAAATGACGCAGCTCTTTGCGACCGTC
ATCCGGCAGCTGGGGGCGACGTGCTTACCCTCTGGCAAGCAGACGAAGATCTTTGAAATACACTCCAAGCGTAGC
CAGGCTCTCCGTGATAACACATCCAGAGACTTCCGTAACGACAAGTCTCGTGCCTCCATCCTGATCTCGTCAGAC
GTGTCTGCTCGTGGCATTGACTACCCTGGCGTCACACGTGTTATTCAAGTTGGTGTTCCCACGAGCTCTGACCAG
TACATCCACCGTGTCGGTCGCACCGGTCGCGGTATGAATACGGTTGGACGTGCGGACATCGTCCTTCTTCCATGG
GAGGTCGGCTTTGTTACCTGGCAATTGACGCATATCCCGCTCAAGCCACTCACCACAAACGAGCTCAAGAAGCAA
GTGACGGAGCTCGCTAAGACGTACGATGCGACCGCTCCTTTGGAAGTCAAGGAGCAGCGCAACGTCTTGGACAGG
AGGGGTTATCCGATGCCCCAACCCATCTGGCCCTACTCGCCTGCGCACGAGAAATTCAACGAGTCCATTACGTCC
TTCGTCGAGAAAATTGACGAGGAAGCTGTCAAGGAGGTCATGATGTCGAACTTGGGCTACTACATTGGTCGCAGC
GGTGACCTGCGCGTACAGCGCAACGTCGTCGTCGAGGGTGTCAAGGACTGGACCGTCAAGACCATGGGTTTGCCT
GCTCCTCCATACGTCTCCCCCGCCTTCCTGGCGAAGCTCGGTCTCGCTGGAGGTGGTGAAGGGCGCAACAATGGT
AGCCGAGACTCTCCTTCCAGCTTCAGCCGTCCCGGCCAGCGTTCTTGGGAGGGAAGAGGCTCACAGCGTTCTTGG
GAGGGAAGAGGCTCACAGCGGTCTGATCGACGAAGTGACGATCGCGAACGTGGCGACAGCCGCGGTCGTTTTACC
AACGACAGACACGACAGACGTCAGCAATCGTCTGAGAGGGACCGGCATTCGTTTTCTGACAGGGATCAACGTTCG
TTCTCAGACAGGGATCAACGTCCCCAATTTTCCGAGAGGGACCGACGTCCGCAGTTTTCTGACCGACGTCAGCAA
CCGTACGAGCGGGAGCGCAGGCCACGTTCTTTCGGTGTGGCGGAGTAA
Transcript >RhoplFPRL280|19_4
ATGAGTGAGGAGGCCGCGCTCAAGGAAACAGCGAACAGCCAGCAAGTGACGGAACCGAGCACTCTTCCTGAGGCA
GAAGAGGTAGACCGGGCCTCGTTTGCATCGTTGAAGGATAAGATCTCGCTCCCGACCTGGACGGCTATAACAGAG
AAGCCCTTCCATCTCAAGACCATGTCGCCTGTCCAAGAAGCTGTCTTGCCTCTTTTGCCGCAGCTCGCCGAGCCG
TTCGTGGAAGCGGGCACGGGGAAGCGACCGGCTCGAGACTTACTCGTGCGGGCAAAGACGGGAACCGGAAAGACA
TTGGCCTTCCTTGTGCCTGCAGTCGAGGCGCGGCTGAAGGCTATCGAAGCTGCTGGCAACCAGGGAGTGCAGGAC
GCGGGTCTCGTTCAGGACAAGAAACTGGAAGTACGCGTGCAACGGGTGTACGCCCGCACCCAAATCGGTACAATC
ATCATCAGTCCTACGCGTGAGCTGGCAACGCAGATTGCGAATGAAGCCATGCGGTTGACGCAACACCACGACGGC
TTCGAGGTCAGGTTGTTCATCGGCGGTGCTAGCAAGGTTCGCCAGATGCGGGACTTCATGAAGGGCAGACGCGAC
ATCGTTGTAGGGACACCTGGCCGACTTCGAGATCTCCTGGAGAACGAGCCGGAGTTCACCAAGGCTGCATCGCAA
GCTAACATGCTGGTTCTGGACGAAGCGGACACACTCCTGGATATGGGCTTCCGTGATGACCTCGAGGCGATCATC
AACTACATGCCAAAGCAGCCACTGAGGCAGACGTTCATGTTCTCGGCTACGGTCTCGACGGAAATTCGGCAGATT
GCACGCGCTGCGCTGGACAAGAACCACGTCTTCATCGACTGTGTCTCCGATGACGCCCCGCCCACACACGCACAC
ATCCCGCAGTACCATACCGTACTCCCGAACGCAGGGGAACAGCTACCTCACCTCCTCCGCCTGCTTGCGCATGAC
CAGTTGACCAATGAGAAGTCGAAGATCATCATGTTCTTGCCCACCACAAAAATGACGCAGCTCTTTGCGACCGTC
ATCCGGCAGCTGGGGGCGACGTGCTTACCCTCTGGCAAGCAGACGAAGATCTTTGAAATACACTCCAAGCGTAGC
CAGGCTCTCCGTGATAACACATCCAGAGACTTCCGTAACGACAAGTCTCGTGCCTCCATCCTGATCTCGTCAGAC
GTGTCTGCTCGTGGCATTGACTACCCTGGCGTCACACGTGTTATTCAAGTTGGTGTTCCCACGAGCTCTGACCAG
TACATCCACCGTGTCGGTCGCACCGGTCGCGGTATGAATACGGTTGGACGTGCGGACATCGTCCTTCTTCCATGG
GAGGTCGGCTTTGTTACCTGGCAATTGACGCATATCCCGCTCAAGCCACTCACCACAAACGAGCTCAAGAAGCAA
GTGACGGAGCTCGCTAAGACGTACGATGCGACCGCTCCTTTGGAAGTCAAGGAGCAGCGCAACGTCTTGGACAGG
AGGGGTTATCCGATGCCCCAACCCATCTGGCCCTACTCGCCTGCGCACGAGAAATTCAACGAGTCCATTACGTCC
TTCGTCGAGAAAATTGACGAGGAAGCTGTCAAGGAGGTCATGATGTCGAACTTGGGCTACTACATTGGTCGCAGC
GGTGACCTGCGCGTACAGCGCAACGTCGTCGTCGAGGGTGTCAAGGACTGGACCGTCAAGACCATGGGTTTGCCT
GCTCCTCCATACGTCTCCCCCGCCTTCCTGGCGAAGCTCGGTCTCGCTGGAGGTGGTGAAGGGCGCAACAATGGT
AGCCGAGACTCTCCTTCCAGCTTCAGCCGTCCCGGCCAGCGTTCTTGGGAGGGAAGAGGCTCACAGCGTTCTTGG
GAGGGAAGAGGCTCACAGCGGTCTGATCGACGAAGTGACGATCGCGAACGTGGCGACAGCCGCGGTCGTTTTACC
AACGACAGACACGACAGACGTCAGCAATCGTCTGAGAGGGACCGGCATTCGTTTTCTGACAGGGATCAACGTTCG
TTCTCAGACAGGGATCAACGTCCCCAATTTTCCGAGAGGGACCGACGTCCGCAGTTTTCTGACCGACGTCAGCAA
CCGTACGAGCGGGAGCGCAGGCCACGTTCTTTCGGTGTGGCGGAGTAA
Gene >RhoplFPRL280|19_4
ATGAGTGAGGAGGCCGCGCTCAAGGAAACAGCGAACAGCCAGCAAGTGACGGAACCGAGCACTCTTCCTGAGGCA
GAAGAGGTAGACCGGGCCTCGTTTGCATCGTTGAAGGATAAGATCTCGCTCCCGACCTGGACGGCTATAACAGAG
AAGCCCTTCCATCTCAAGACCATGTCGCCTGTCCAAGAAGCTGTCTTGCCTCTTTTGCCGCAGCTCGCCGAGCCG
TTCGTGGAAGCGGGCACGGGGAAGCGACCGGCTCGAGACTTACTCGTGCGGGCAAAGACGGGAACCGGAAAGACA
TTGGCCTTCCTTGTGCCTGCAGTCGAGGCGCGGCTGAAGGCTATCGAAGCTGCTGGCAACCAGGGAGTGCAGGAC
GCGGGTCTCGTTCAGGACAAGAAACTGGAAGTACGCGTGCAACGGGTGTACGCCCGCACCCAAATCGGTACAATC
ATCATCAGTCCTACGCGTGAGCTGGCAACGCAGATTGCGAATGAAGCCATGCGGTTGACGCAACACCACGACGGC
TTCGAGGTCAGGTTGTTCATCGGCGGTGCTAGCAAGGTTCGCCAGATGCGGGACTTCATGAAGGGCAGACGCGAC
ATCGTTGTAGGGACACCTGGCCGACTTCGAGATCTCCTGGAGAACGAGCCGGAGTTCACCAAGGCTGCATCGCAA
GCTAACATGGTATGTCGTTGTGTGGATGCGTGACTATATGGTAGCTAATTACTTTTCTAGCTGGTTCTGGACGAA
GCGGACACACTCCTGGATATGGGCTTCCGTGATGACCTCGAGGCGATCATCAACTACATGCCAAAGCAGCCACTG
AGGCAGACGTTCATGTTCTCGGCTACGGTCTCGACGGAAATTCGGCAGATTGCACGCGCTGCGCTGGACAAGAAC
CACGTCTTCATCGACTGTGTCTCCGATGACGCCCCGCCCACACACGCACACATCCCGCAGTACCATACCGTACTC
CCGAACGCAGGGGAACAGCTACCTCACCTCCTCCGCCTGCTTGCGCATGACCAGTTGACCAATGAGAAGTCGAAG
ATCATCATGTTCTTGCCCACCACAAAAATGACGCAGCTCTTTGCGACCGTCATCCGGCAGCTGGGGGCGACGTGC
TTACCCTCTGGCAAGCAGACGAAGATCTTTGAAATACACTCCAAGCGTAGCCAGGCTCTCCGTGATAACACATCC
AGAGACTTCCGTAACGACAAGTCTCGTGCCTCCATCCTGATCTCGTCAGACGTGTCTGCTCGTGGCATTGACTAC
CCTGGCGTCACACGTGTTATTCAAGTTGGTGTTCCCACGAGCTCTGACCAGTACATCCACCGTGTCGGTCGCACC
GGTCGCGGTATGAATACGGTTGGACGTGCGGACATCGTCCTTCTTCCATGGGAGGTCGGCTTTGTTACCTGGCAA
TTGACGCATATCCCGCTCAAGCCACTCACCACAAACGAGCTCAAGAAGCAAGTGACGGAGCTCGCTAAGACGTAC
GATGCGACCGCTCCTTTGGAAGTCAAGGAGCAGCGCAACGTCTTGGACAGGAGGGGTTATCCGATGCCCCAACCC
ATCTGGCCCTACTCGCCTGCGCACGAGAAATTCAACGAGTCCATTACGTCCTTCGTCGAGAAAATTGACGAGGAA
GCTGTCAAGGAGGTCATGATGTCGAACTTGGGCTACTACATTGGTCGCAGCGGTGACCTGCGCGTACAGCGCAAC
GTCGTCGTCGAGGGTGTCAAGGACTGGACCGTCAAGACCATGGGTTTGCCTGCTCCTCCATACGTCTCCCCCGCC
TTCCTGGCGAAGCTCGGTCTCGCTGGAGGTGGTGAAGGGCGCAACAATGGTAGCCGAGACTCTCCTTCCAGCTTC
AGCCGTCCCGGCCAGCGTTCTTGGGAGGGAAGAGGCTCACAGCGTTCTTGGGAGGGAAGAGGCTCACAGCGGTCT
GATCGACGAAGTGACGATCGCGAACGTGGCGACAGCCGCGGTCGTTTTACCAACGACAGACACGACAGACGTCAG
CAATCGTCTGAGAGGGACCGGCATTCGTTTTCTGACAGGGATCAACGTTCGTTCTCAGACAGGGATCAACGTCCC
CAATTTTCCGAGAGGGACCGACGTCCGCAGTTTTCTGACCGACGTCAGCAACCGTACGAGCGGGAGCGCAGGCCA
CGTTCTTTCGGTGTGGCGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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