Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|19_22
Gene name
LocationNODE_19:36394..37642
Strand-
Gene length (bp)1248
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 81 103 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|19_22
MLVKDEQLTITQAEWFTNLFDISDVQNYYHSCQAAETSSHSTVWLFYVFAMSYDFVMLCTSTFYLLRYTPPSGRM
TRLVKLMFFDGLGFFVILTAVNVFNLILFRTSDKLTQAYRTCLGEALTWIMSQKILIHLRDAAADHHRSTQVVSR
PPHSPRSVSHAMRSQFDSKDSTDDEFNLSRTPAPDGLSVTDIVRNLSDVELDVEVQVGHSVTVECDPEACPNEPY
RGVVWSGDGTPTAKEDTAC*
Coding >RhoplFPRL280|19_22
ATGCTCGTTAAGGACGAACAGCTGACAATTACGCAGGCGGAATGGTTTACGAATCTGTTTGATATCTCTGATGTA
CAGAACTATTATCACAGCTGTCAAGCAGCGGAGACATCTAGCCATTCAACCGTCTGGCTTTTCTACGTCTTCGCA
ATGTCTTACGACTTCGTCATGCTTTGCACCTCGACATTCTATCTACTCCGGTACACACCACCGTCTGGCAGGATG
ACCCGTCTGGTGAAGTTGATGTTTTTTGACGGCCTAGGATTTTTCGTGATCCTGACTGCCGTGAATGTCTTCAAT
CTAATTTTGTTCAGAACAAGCGATAAGTTGACACAGGCATATAGAACATGTCTCGGAGAGGCATTGACATGGATA
ATGAGCCAGAAAATCCTCATTCATTTACGAGACGCGGCCGCCGACCACCATCGCAGCACGCAAGTAGTCTCAAGA
CCGCCCCACTCCCCACGCTCCGTCTCGCACGCGATGCGCTCGCAATTTGATTCCAAAGACAGCACGGACGACGAG
TTCAACCTCTCACGGACGCCCGCACCCGACGGTCTGTCAGTCACGGACATCGTGCGCAACTTGAGCGATGTGGAG
CTAGATGTAGAGGTGCAAGTCGGGCACAGCGTCACGGTGGAGTGTGACCCAGAGGCGTGCCCAAACGAGCCGTAT
CGCGGCGTAGTATGGTCGGGCGACGGAACGCCAACAGCCAAGGAAGACACGGCATGCTAA
Transcript >RhoplFPRL280|19_22
ATGCTCGTTAAGGACGAACAGCTGACAATTACGCAGGCGGAATGGTTTACGAATCTGTTTGATATCTCTGATGTA
CAGAACTATTATCACAGCTGTCAAGCAGCGGAGACATCTAGCCATTCAACCGTCTGGCTTTTCTACGTCTTCGCA
ATGTCTTACGACTTCGTCATGCTTTGCACCTCGACATTCTATCTACTCCGGTACACACCACCGTCTGGCAGGATG
ACCCGTCTGGTGAAGTTGATGTTTTTTGACGGCCTAGGATTTTTCGTGATCCTGACTGCCGTGAATGTCTTCAAT
CTAATTTTGTTCAGAACAAGCGATAAGTTGACACAGGCATATAGAACATGTCTCGGAGAGGCATTGACATGGATA
ATGAGCCAGAAAATCCTCATTCATTTACGAGACGCGGCCGCCGACCACCATCGCAGCACGCAAGTAGTCTCAAGA
CCGCCCCACTCCCCACGCTCCGTCTCGCACGCGATGCGCTCGCAATTTGATTCCAAAGACAGCACGGACGACGAG
TTCAACCTCTCACGGACGCCCGCACCCGACGGTCTGTCAGTCACGGACATCGTGCGCAACTTGAGCGATGTGGAG
CTAGATGTAGAGGTGCAAGTCGGGCACAGCGTCACGGTGGAGTGTGACCCAGAGGCGTGCCCAAACGAGCCGTAT
CGCGGCGTAGTATGGTCGGGCGACGGAACGCCAACAGCCAAGGAAGACACGGCATGCTAA
Gene >RhoplFPRL280|19_22
ATGCTCGTTAAGGACGAACAGCTGACAATTACGCAGGCGGAATGGTTTACGAATCTGTTTGATATCTCTGGTAAG
TAACATCCCTGTATATGCATGATAGTACACGCGTACTCAGTGTTTACTTGCAGATGTACAGAACTATGTAAAGTT
CTTCGCACCTTGCCTGTTTCAACTTGTGTGTTGACGCCGTGGTCAAATTACCATGCAATCATAGAACTCCAAGTG
AGTTGGTGAATCGTTTCGTAAAGGCGATTTCTAGACATTAAAGTGGCCATTATCACAGCTGTCAAGCAGCGGAGA
CATCTAGCCATTCAACCGTCTGGCTTTTCTACGTCTTCGCAATGTCTTACGACTTCGTCATGCTTTGCACCTCGA
CATTCTATCTACTCCGGTACACACCACCGTCTGGCAGGTGCGTTGTCGTTTGTCCTCTTAGAGTCGCAATATAAA
CACCAAATTGCAGGATGACCCGTCTGGTGAAGTTGTCAGTGGCTTATCATCAAACCGCCGTTATTTCCTTCTCAT
TTGTGATGCTCGCAGGATGTTTTTTGACGGCCTAGGATTTTTCGTGATCCTGACTGGTACGTTATTGTTCGTCCT
TCTAAACACTTGAAGTGACTTATGATACCAGCCGTGAATGTCTTCAATCTAATTTTGTTCAGAACAAGCGATAAG
TTGACACAGGTCAGTCACGTCTTCTTCTCCTGAACGGCTCGGCTGACTCCGTGTTCAGGCATCTGGGTTAGTCAT
CGTTGTGGCGATCGTTATGCCTTAGCACTCATTGTTGGCATATAGAACATGTCTCGGAGAGGCATTGACATGGAT
AATGAGCCAGAAAATCCTCATTCATTTACGAGGTGCGTAGCATATACTTCCTTCTCCCAAGCTCACTTTTGAGCT
TGGTTCTTTTCATCGCCAGACGCGGCCGCCGACCACCATCGCAGCACGCAAGTAGTCTCAAGACCGCCCCACTCC
CCACGCTCCGTCTCGCACGCGATGCGCTCGCAATTTGATTCCAAAGACAGCACGGACGACGAGTTCAACCTCTCA
CGGACGCCCGCACCCGACGGTCTGTCAGTCACGGACATCGTGCGCAACTTGAGCGATGTGGAGCTAGATGTAGAG
GTGCAAGTCGGGCACAGCGTCACGGTGGAGTGTGACCCAGAGGCGTGCCCAAACGAGCCGTATCGCGGCGTAGTA
TGGTCGGGCGACGGAACGCCAACAGCCAAGGAAGACACGGCATGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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