Fungal Genomics

General Properties

Protein ID	RhoplFPRL280|19_17
Gene name
Location	NODE_19:32158..33280
Strand	-
Gene length (bp)	1122
Transcript length (bp)	909
Coding sequence length (bp)	909
Protein length (aa)	303

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00013	KH_1	KH domain	3.3E-06	183	244

GO

GO Term	Description	Terminal node
GO:0003723	RNA binding	Yes
GO:0005488	binding	No
GO:0097159	organic cyclic compound binding	No
GO:0003674	molecular_function	No
GO:0003676	nucleic acid binding	No
GO:1901363	heterocyclic compound binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID	Type of secondary metabolism gene
Cluster 6	(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	1
Orthogroup	1385
Change Orthofinder run	1: Agaricomycetes

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|017730
Agaricus bisporus var bisporus H39	AgabiH39|090760
Agaricus bisporus var bisporus H97	AgabiH97|017730
Agaricus bisporus var bisporus H97	AgabiH97|090760
Rhodonia placenta FPRL280	RhoplFPRL280|19_17 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>RhoplFPRL280|19_17 MSSKRKWDQAAPEEGETPTKAMKGEDGKTASEAAAAAAAIAAKIAAQFANAGAGGGTPLGKDPHDGDFTQDIDIN DVRNRYLLTKGSTQTQIHEETGASVSTKGVWYPDRSKATEKDPPLYLHISATTQEIMQKAVDKVNELISMDMGSL VEDKKDRLRERRKWPEEKIPVGIDTIRNFNVRAKVVGPSGMFVKYIQQETGTRVQIKGIGSGFVDQETGHEHDEP MFIHVTGPDEGQVQRAKVLTEDLLEVVRQEHAKVKTVVQQQQMELHQAQIQYAAYSAYAVCMLHSFSRPSYTTVA AA*
Coding	>RhoplFPRL280|19_17 ATGTCTTCCAAACGCAAATGGGACCAGGCTGCTCCAGAAGAGGGTGAAACACCCACAAAAGCAATGAAGGGCGAA GATGGAAAGACGGCGTCCGAGGCTGCTGCAGCCGCAGCCGCCATCGCTGCAAAAATTGCGGCCCAATTCGCGAAT GCCGGAGCCGGAGGAGGGACACCATTGGGAAAGGATCCACATGATGGAGATTTTACGCAGGACATTGACATTAAC GATGTACGCAATCGGTATCTGTTGACGAAAGGCTCGACACAGACACAGATCCATGAGGAGACCGGAGCGTCCGTC AGCACTAAAGGTGTATGGTATCCTGACCGTTCGAAAGCTACAGAAAAGGACCCTCCTCTTTATCTCCACATTTCT GCCACGACGCAAGAGATCATGCAGAAAGCCGTCGATAAAGTGAATGAACTTATTTCGATGGACATGGGGTCACTG GTGGAGGACAAGAAGGACCGGTTGCGAGAACGGCGCAAGTGGCCAGAGGAAAAGATTCCTGTAGGTATCGATACG ATCCGCAACTTCAACGTGCGCGCAAAGGTTGTAGGACCCTCGGGCATGTTCGTCAAATATATCCAGCAAGAGACG GGAACTCGGGTGCAGATCAAAGGTATCGGTTCTGGTTTCGTTGACCAAGAGACAGGCCACGAACACGATGAGCCC ATGTTTATTCATGTGACCGGGCCTGATGAGGGTCAGGTTCAACGCGCGAAAGTCCTCACTGAGGACCTGCTCGAG GTCGTCCGCCAGGAGCATGCGAAAGTGAAGACCGTTGTGCAGCAGCAACAGATGGAGCTGCATCAAGCCCAGATC CAGTACGCCGCCTACAGTGCTTACGCCGTATGTATGCTCCACTCATTCTCTCGTCCTTCCTATACGACAGTCGCC GCCGCTTGA
Transcript	>RhoplFPRL280|19_17 ATGTCTTCCAAACGCAAATGGGACCAGGCTGCTCCAGAAGAGGGTGAAACACCCACAAAAGCAATGAAGGGCGAA GATGGAAAGACGGCGTCCGAGGCTGCTGCAGCCGCAGCCGCCATCGCTGCAAAAATTGCGGCCCAATTCGCGAAT GCCGGAGCCGGAGGAGGGACACCATTGGGAAAGGATCCACATGATGGAGATTTTACGCAGGACATTGACATTAAC GATGTACGCAATCGGTATCTGTTGACGAAAGGCTCGACACAGACACAGATCCATGAGGAGACCGGAGCGTCCGTC AGCACTAAAGGTGTATGGTATCCTGACCGTTCGAAAGCTACAGAAAAGGACCCTCCTCTTTATCTCCACATTTCT GCCACGACGCAAGAGATCATGCAGAAAGCCGTCGATAAAGTGAATGAACTTATTTCGATGGACATGGGGTCACTG GTGGAGGACAAGAAGGACCGGTTGCGAGAACGGCGCAAGTGGCCAGAGGAAAAGATTCCTGTAGGTATCGATACG ATCCGCAACTTCAACGTGCGCGCAAAGGTTGTAGGACCCTCGGGCATGTTCGTCAAATATATCCAGCAAGAGACG GGAACTCGGGTGCAGATCAAAGGTATCGGTTCTGGTTTCGTTGACCAAGAGACAGGCCACGAACACGATGAGCCC ATGTTTATTCATGTGACCGGGCCTGATGAGGGTCAGGTTCAACGCGCGAAAGTCCTCACTGAGGACCTGCTCGAG GTCGTCCGCCAGGAGCATGCGAAAGTGAAGACCGTTGTGCAGCAGCAACAGATGGAGCTGCATCAAGCCCAGATC CAGTACGCCGCCTACAGTGCTTACGCCGTATGTATGCTCCACTCATTCTCTCGTCCTTCCTATACGACAGTCGCC GCCGCTTGA
Gene	>RhoplFPRL280|19_17 ATGTCTTCCAAACGCAAATGGGACCAGGCTGCTCCAGAAGAGGGTGAAACACCCACAAAAGCAATGAAGGGCGAA GATGGAAAGACGGCGTCCGAGGCTGCTGCAGCCGCAGCCGCCATCGCTGCAAAAATTGCGGCCCAATTCGCGAAT GCCGGAGCCGGAGGAGGGACACCATTGGGAAAGGATCCACATGATGGAGATTTTACGCAGGACATTGACATTAAC GATGTACGCAATCGGTATCTGTTGACGAAAGGCTCGACACAGACACAGGTGAGTCCTCAATCTCAATGAGCTCGC TGGAGTTACAATGAATAACATCTACTTCTCGCTAGATCCATGAGGAGACCGGAGCGTCCGTCAGCACTAAAGGTG TATGGTATCCTGACCGTTCGAAAGCTACAGAAAAGGACCCTCCTCTTTATCTCCACATTTCTGCCACGACGCAAG AGATCATGCAGAAAGCCGTCGATAAAGTGAATGAACTTATTTCGATGGACATGGGGTCACTGGTGGAGGACAAGA AGGACCGGTTGCGAGAACGGGTATGTCTTGAAGTCGATGGAACCAGGTCTACTTCTTGAACGGTTGTTTGCAGCG CAAGTGGCCAGAGGAAAAGATTCCTGTAGGTATCGATACGATCCGCAACTTCAACGTGCGCGCAAAGGTTGTAGG ACCCTCGGTATGTTCCTTCTGCTTGCGCATGATGCACGAGTCTTACTGGCATGTAGGGCATGTTCGTCAAATATA TCCAGCAAGAGACGGGAACTCGGGTGCAGATCAAAGGTATCGGTTCTGGTTTCGTTGACCAAGAGACAGGCCACG AACACGATGAGCCCATGTTTATTCATGTGACGTACGTGCAGTCTATCCGGCACGTATATGTATATACTCATACTT TCCAGCGGGCCTGATGAGGGTCAGGTTCAACGCGCGAAAGTCCTCACTGAGGACCTGCTCGAGGTCGTCCGCCAG GAGCATGCGAAAGTGAAGACCGTTGTGCAGCAGCAACAGATGGAGCTGCATCAAGCCCAGATCCAGTACGCCGCC TACAGTGCTTACGCCGTATGTATGCTCCACTCATTCTCTCGTCCTTCCTATACGACAGTCGCCGCCGCTTGA