Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|168_9
Gene name
LocationNODE_168:13937..15342
Strand-
Gene length (bp)1405
Transcript length (bp)732
Coding sequence length (bp)732
Protein length (aa) 244

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 53 75 22
3 90 112 22
4 124 146 22
5 166 188 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|168_9
MNMMLYGVMVTQTFFYYSTYSRILKWGILEVGVLFLADTLNSIFNIWWAYHVFINNFGTPRSLIGIIAMQVQLFY
AWRLHKLGASKWISGCVAGLSICSCLAAIGTSINIGIKPIITNFAHYKAIVIVWLVSSTVADVAIAFALTWRLRR
SITGYAQTDTVISRVIHITMSNGLLIAAFALADMIAFLATVRCASHILLYYAHTAVHKGWRTAFGSVILIALYRR
SSHIQYSSSAFNYALIKL*
Coding >RhoplFPRL280|168_9
ATGAATATGATGCTGTACGGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGATACTAAAA
TGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAATCTTTAATATATGGTGGGCATAT
CACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTGGGATCATCGCTATGCAAGTCCAGCTCTTCTAC
GCCTGGCGGCTTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGT
CTAGCAGCGATCGGAACCTCCATCAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGCGATA
GTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATCGCCTTTGCCCTTACTTGGCGCTTGAGGCGA
AGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACATCACAATGTCTAACGGCTTGTTA
ATTGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTAT
TATGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGA
TCGAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA
Transcript >RhoplFPRL280|168_9
ATGAATATGATGCTGTACGGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGATACTAAAA
TGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAATCTTTAATATATGGTGGGCATAT
CACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTGGGATCATCGCTATGCAAGTCCAGCTCTTCTAC
GCCTGGCGGCTTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGT
CTAGCAGCGATCGGAACCTCCATCAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGCGATA
GTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATCGCCTTTGCCCTTACTTGGCGCTTGAGGCGA
AGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACATCACAATGTCTAACGGCTTGTTA
ATTGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTAT
TATGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGA
TCGAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA
Gene >RhoplFPRL280|168_9
ATGAATATGATGTACGTCATCTCCTCGTTCCATGATAATGTAAATACCTATGCAATAGTGGCCTGAAGGCTGTAC
GGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGTTCGTCGCAATTTCATGTGACGAATTA
CAGAGTGTCTTGACGACCTTTACCCCAGAGACCAAATGTGGATAAAGATCTACGTGAGCCATAATTGACACACCC
ATTTGAACACTAAGATACTAAAATGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAA
TCTTTAATATATGGTGGGCATATCACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTCTCACGCGAG
CTGATCTCATTGTGCTTCATTATGAAGGAAGTGTGGACGCAGTTACAGTAGCCAACTGGCGTGAGTATTCCTTAT
ATCTTTGGCGCATTTTTGCCAATATTTAGGCTACCGCCATTTCAGTCTTCGAGACAGGTAAGGTGTCGTCCCAGC
TCTTAAAATTGCCTATTGAATCACTATCTTGCGAGTGTAGAGGAAGCGATGGCTGTGAGTTTGCACGCGCAATAG
TGGGTGTTTGTAGGGCACTCAAGTCATCCTAGGGGATCATCGCTATGCAAGTCCAGCTCTTCTACGCCTGGCGGC
TTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGTCGTAGGGGTT
CCCATTTACGAAGGCACCTATAAATATGCGCTGATATCTTCCGAATTATGCAGTAGCAGCGATCGGAACCTCCAT
CAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGTACGGTCCACGATGGAGGATATTCTCTA
TTCATGCAAAACTCGACTGTTCAGGCGATAGTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATC
GCCTTTGCCCTTACTTGGCGCTTGGTACGTGCTGTCTTGTGTTGCGCGAGAAGCTGTAGCAGCGCATTGACCTTA
GGCACTTCGAGCAGAGGCGAAGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACAGTA
TGTACGCCTTCAATGGAAGATTGTCATGGTGCTGATCAAGGTCCTGTTAGTCACAATGTCTAACGGCTTGTTAAT
TGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTATTA
TGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGATC
GAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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