© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | RhoplFPRL280|168_9 |
| Gene name | |
| Location | NODE_168:13937..15342 |
| Strand | - |
| Gene length (bp) | 1405 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 48 | 22 |
| 2 | 53 | 75 | 22 |
| 3 | 90 | 112 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 166 | 188 | 22 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 5 | (None) |
| Orthofinder run ID | 1 |
| Orthogroup | 19 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >RhoplFPRL280|168_9 MNMMLYGVMVTQTFFYYSTYSRILKWGILEVGVLFLADTLNSIFNIWWAYHVFINNFGTPRSLIGIIAMQVQLFY AWRLHKLGASKWISGCVAGLSICSCLAAIGTSINIGIKPIITNFAHYKAIVIVWLVSSTVADVAIAFALTWRLRR SITGYAQTDTVISRVIHITMSNGLLIAAFALADMIAFLATVRCASHILLYYAHTAVHKGWRTAFGSVILIALYRR SSHIQYSSSAFNYALIKL* |
| Coding | >RhoplFPRL280|168_9 ATGAATATGATGCTGTACGGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGATACTAAAA TGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAATCTTTAATATATGGTGGGCATAT CACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTGGGATCATCGCTATGCAAGTCCAGCTCTTCTAC GCCTGGCGGCTTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGT CTAGCAGCGATCGGAACCTCCATCAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGCGATA GTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATCGCCTTTGCCCTTACTTGGCGCTTGAGGCGA AGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACATCACAATGTCTAACGGCTTGTTA ATTGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTAT TATGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGA TCGAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA |
| Transcript | >RhoplFPRL280|168_9 ATGAATATGATGCTGTACGGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGATACTAAAA TGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAATCTTTAATATATGGTGGGCATAT CACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTGGGATCATCGCTATGCAAGTCCAGCTCTTCTAC GCCTGGCGGCTTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGT CTAGCAGCGATCGGAACCTCCATCAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGCGATA GTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATCGCCTTTGCCCTTACTTGGCGCTTGAGGCGA AGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACATCACAATGTCTAACGGCTTGTTA ATTGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTAT TATGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGA TCGAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA |
| Gene | >RhoplFPRL280|168_9 ATGAATATGATGTACGTCATCTCCTCGTTCCATGATAATGTAAATACCTATGCAATAGTGGCCTGAAGGCTGTAC GGTGTCATGGTCACTCAAACGTTCTTTTACTACTCGACCTACTCACGGTTCGTCGCAATTTCATGTGACGAATTA CAGAGTGTCTTGACGACCTTTACCCCAGAGACCAAATGTGGATAAAGATCTACGTGAGCCATAATTGACACACCC ATTTGAACACTAAGATACTAAAATGGGGCATTCTCGAGGTTGGCGTCTTGTTTCTAGCGGACACGTTGAATTCAA TCTTTAATATATGGTGGGCATATCACGTATTTATCAATAACTTCGGTACGCCAAGAAGCCTGATTCTCACGCGAG CTGATCTCATTGTGCTTCATTATGAAGGAAGTGTGGACGCAGTTACAGTAGCCAACTGGCGTGAGTATTCCTTAT ATCTTTGGCGCATTTTTGCCAATATTTAGGCTACCGCCATTTCAGTCTTCGAGACAGGTAAGGTGTCGTCCCAGC TCTTAAAATTGCCTATTGAATCACTATCTTGCGAGTGTAGAGGAAGCGATGGCTGTGAGTTTGCACGCGCAATAG TGGGTGTTTGTAGGGCACTCAAGTCATCCTAGGGGATCATCGCTATGCAAGTCCAGCTCTTCTACGCCTGGCGGC TTCACAAACTTGGTGCAAGTAAATGGATCAGTGGTTGTGTTGCTGGTCTTTCGATCTGCAGCTGTCGTAGGGGTT CCCATTTACGAAGGCACCTATAAATATGCGCTGATATCTTCCGAATTATGCAGTAGCAGCGATCGGAACCTCCAT CAATATTGGTATCAAACCAATCATAACCAACTTCGCTCATTACAAGGTACGGTCCACGATGGAGGATATTCTCTA TTCATGCAAAACTCGACTGTTCAGGCGATAGTCATAGTCTGGTTGGTCTCGTCCACCGTGGCCGACGTTGCCATC GCCTTTGCCCTTACTTGGCGCTTGGTACGTGCTGTCTTGTGTTGCGCGAGAAGCTGTAGCAGCGCATTGACCTTA GGCACTTCGAGCAGAGGCGAAGCATTACTGGCTATGCACAGACTGATACTGTGATCTCAAGAGTGATTCACAGTA TGTACGCCTTCAATGGAAGATTGTCATGGTGCTGATCAAGGTCCTGTTAGTCACAATGTCTAACGGCTTGTTAAT TGCGGCATTCGCCCTTGCCGACATGATTGCGTTTCTCGCAACGGTGCGCTGTGCTTCACATATTCTCCTTTATTA TGCCCACACCGCTGTACACAAAGGCTGGCGGACTGCATTTGGGTCTGTCATCCTCATTGCTTTATATCGTCGATC GAGTCATATTCAATATTCATCCTCAGCTTTCAATTATGCGCTTATCAAGCTGTAA |