© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | RhoplFPRL280|168_8 |
| Gene name | |
| Location | NODE_168:11136..13180 |
| Strand | + |
| Gene length (bp) | 2044 |
| Transcript length (bp) | 930 |
| Coding sequence length (bp) | 930 |
| Protein length (aa) | 310 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20152 | DUF6534 | Family of unknown function (DUF6534) | 4.3E-18 | 139 | 226 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 46 | 68 | 22 |
| 3 | 98 | 115 | 17 |
| 4 | 130 | 152 | 22 |
| 5 | 173 | 195 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >RhoplFPRL280|168_8 MTAVERIEGAFIMELAITVMLYGITTTQAHFYWWSYPQDAKLIKRIVLIVWILETVHTVFCLHLMYNYTIVDFGS LEHVVNLVWSSLQRSFKVSDRNVVITVIPAILLFVRVEFHSSLGPRVSTHGVSIITITFGLVLSAVVDLVIAALL IYYLQSNQSLSQRTHHIISSLQAYVINTGALTMIVSIAIVLTFALINGSFLFLGLVEIQSKLYANSFLATLNARQ HLNQASADPAREAISMSTSIYPRSQNFTGQTHSIEVYRTVERDSTFYGSELPSPGIAGTYIGSLEGGKTDLYKAP PLSEYGEAL* |
| Coding | >RhoplFPRL280|168_8 ATGACAGCCGTGGAGAGGATCGAGGGGGCGTTCATTATGGAACTTGCGATAACCGTGATGTTGTACGGTATCACA ACAACACAGGCCCATTTCTATTGGTGGTCCTATCCTCAAGATGCTAAGTTGATTAAGCGGATTGTTCTCATCGTA TGGATTCTAGAGACTGTGCATACTGTATTCTGCCTGCATTTGATGTACAACTACACCATTGTTGACTTCGGAAGC CTTGAGCATGTAGTAAATCTTGTGTGGTCATCATTGCAGCGATCATTCAAAGTGAGCGATAGGAATGTCGTGATC ACAGTCATTCCTGCTATCTTGCTTTTCGTCCGAGTAGAATTTCACAGCTCATTGGGTCCTCGGGTGAGCACTCAT GGCGTCTCCATCATCACGATTACCTTCGGACTAGTCCTGTCTGCCGTGGTCGACCTCGTCATTGCTGCCCTGCTC ATATACTACTTGCAATCTAATCAGTCACTCTCTCAGAGAACACATCACATCATCAGTTCGCTTCAAGCCTATGTA ATCAACACCGGGGCTTTGACCATGATTGTGTCGATCGCTATCGTGCTCACGTTCGCACTGATAAATGGTAGCTTC CTCTTCCTCGGGCTGGTAGAGATACAGAGCAAGCTATACGCGAACTCATTTCTTGCAACCCTCAACGCTCGTCAG CACCTGAACCAAGCCTCGGCAGACCCGGCACGTGAGGCAATCTCGATGAGCACTAGCATATATCCGAGGAGTCAG AACTTCACAGGACAAACGCACTCCATTGAGGTTTATAGAACAGTCGAAAGAGACAGCACATTCTATGGCAGCGAG TTGCCGTCACCCGGTATTGCTGGTACGTACATCGGAAGTCTCGAAGGAGGCAAGACCGATCTGTACAAGGCACCA CCCCTGAGCGAGTATGGAGAGGCCTTGTAG |
| Transcript | >RhoplFPRL280|168_8 ATGACAGCCGTGGAGAGGATCGAGGGGGCGTTCATTATGGAACTTGCGATAACCGTGATGTTGTACGGTATCACA ACAACACAGGCCCATTTCTATTGGTGGTCCTATCCTCAAGATGCTAAGTTGATTAAGCGGATTGTTCTCATCGTA TGGATTCTAGAGACTGTGCATACTGTATTCTGCCTGCATTTGATGTACAACTACACCATTGTTGACTTCGGAAGC CTTGAGCATGTAGTAAATCTTGTGTGGTCATCATTGCAGCGATCATTCAAAGTGAGCGATAGGAATGTCGTGATC ACAGTCATTCCTGCTATCTTGCTTTTCGTCCGAGTAGAATTTCACAGCTCATTGGGTCCTCGGGTGAGCACTCAT GGCGTCTCCATCATCACGATTACCTTCGGACTAGTCCTGTCTGCCGTGGTCGACCTCGTCATTGCTGCCCTGCTC ATATACTACTTGCAATCTAATCAGTCACTCTCTCAGAGAACACATCACATCATCAGTTCGCTTCAAGCCTATGTA ATCAACACCGGGGCTTTGACCATGATTGTGTCGATCGCTATCGTGCTCACGTTCGCACTGATAAATGGTAGCTTC CTCTTCCTCGGGCTGGTAGAGATACAGAGCAAGCTATACGCGAACTCATTTCTTGCAACCCTCAACGCTCGTCAG CACCTGAACCAAGCCTCGGCAGACCCGGCACGTGAGGCAATCTCGATGAGCACTAGCATATATCCGAGGAGTCAG AACTTCACAGGACAAACGCACTCCATTGAGGTTTATAGAACAGTCGAAAGAGACAGCACATTCTATGGCAGCGAG TTGCCGTCACCCGGTATTGCTGGTACGTACATCGGAAGTCTCGAAGGAGGCAAGACCGATCTGTACAAGGCACCA CCCCTGAGCGAGTATGGAGAGGCCTTGTAG |
| Gene | >RhoplFPRL280|168_8 ATGACAGCCGTGGAGAGGATCGAGGGGGCGTTCATTATGGAACTTGCGATAACCGTGATGTGAGTGCGACACAAT TTGCGGATCTACGTCACATCCGGTCTCCTGAGACTCATGCCCGAGCCTCACTTCGCCAGGTTGTACGGTATCACA ACAACACAGGCCCATTTCTATTGGTGGTCCTATCCTCAAGATGCTAAGTTGATTAAGCGGATTGTTCTCATCGTA TGGTGAGTGGGCATGTCCAGACGTTCATGTGTAATTAACAACATTGGCGGGTCAGGATTCTAGAGACTGTGCATA CTGTATTCTGCCTGCATTTGATGTACAACTACACCATTGTTGACTTCGGAAGCCTTGAGCATGTAGTAAATCTTG TGTGGTGAGTTCCAAGAACTTCTCCGCGTCCTGTGGACCTATTGCTCAATGCTCCACAGGAGTGTCGGGGTAAGG CTCCTTGCAAACAATTCTGCACATTATCTCATAATTAATTTGGACGCAAGGCTACCGTGCTCACGGCGGTGAGTA GTGCTGCATTGTAGACAATACATATGAAGTAACGTGCCTGATAGGTCATCATTGCAGCGATCATTCAAAGGTGTG TCCTCACGGTCTTGCCTCATCGCATATCTCACTGCGCCGTCAGCTTTTTCATACACCGAATCTGGATCTGTACGT CCCTCCAAGTTTGAATAGTACACCGGTGTATTTTGCTGACCGGGTGGGTCAGTGAGCGATAGGAATGTCGTGATC ACAGTCATTCCTGTGAGTTGGAGACTTATTTGCATCGATCCGTCTATTATGAACTGAAGCTGCGTTTGTAGGCTA TCTTGCTTTTCGTCCGAGTAGGTGAGTGCAACAGTTGCTGTGGGCGCTAATCACAAGTCTGATTGTTGCGACAGC ATTCGGCTTTGGTATGCCGTTGTATCGATGCTTTCGGGGCTTGACTAACCCAGACTTCTAACATCTCAGCAACCG CGAGCTTGACGTAAGCCACGTCCATGAAATCATTCTAAACTATCAGTGCTCAAACTCGTTGAAGGTGGAAGATCA CTTATTACCCAGAATTTCACAGCTCATTGGGTCCTCGGGTGAGCACTCATGGCGTCTCCATCGTACGTTGTAACT TGGCGAACAGCTGACCTGCGCGACGCCTTCATATGCTACGGGTAGATCACGATTACCTTCGGACTAGTCCTGTCT GCCGTGGTCGACCTCGTCATTGCTGCCCTGCTCATATACTACTTGCAATCTAATCAGTCACTCTCTCAGAGGTGT GTCTGCAGCGTGAATAACCTGCCTTCAAGGAACTCATGACTGGCTCGTACACAGAACACATCACATCATCAGTTC GCTTCAAGCCTATGTAATCAACACCGGGGCTTTGACCATGTGAGCACGATTCAGTGCATCTCGAGGAGTATCCAG CAGCTCATGTTTCTACAGGATTGTGTCGATCGCTATCGTGCTCACGGTCAGTGGTCATTTAGCAATTACCGCATT ATGTCTTCTTACGATCGTCCAGTTCGCACTGATAAATGGTAGCTTCCTCTTCCTCGGGCTGGTAGAGATACAGAG CAAGCGTGAGTCCTAGCCGCATAAGAGTCTTGATTAACCGCTAACGACATCATCAGTATACGCGAACTCATTTCT TGCAACGTGGGTCCACCATGTAAGGCCGAGCTGATCTGACGAATCTGACTACTATGAACAAACAGCCTCAACGCT CGTCAGCACCTGAACCAAGCCTCGGCAGACCCGGCACGTGAGGCAATCTCGATGAGCACTAGCATATATCCGAGG AGTCAGAACTTCACAGGACAAACGGTGGGTGAACGCAGCACGCTGGTGTACCAGGCTGATTGAATGCACTGTCCT TCACTAGCACTCCATTGAGGTTTATAGAACAGTCGAAAGAGACAGCACATTCTATGGCAGCGAGTTGCCGTCACC CGGTATTGCTGGTACGTACATCGGAAGTCTCGAAGGAGGCAAGACCGATCTGTACAAGGCACCACCCCTGAGCGA GTATGGAGAGGCCTTGTAG |