Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|159_10
Gene name
LocationNODE_159:11773..13507
Strand+
Gene length (bp)1734
Transcript length (bp)1275
Coding sequence length (bp)1275
Protein length (aa) 425

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02182 SAD_SRA SAD/SRA domain 7.7E-51 18 176

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup524
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|006800
Agaricus bisporus var bisporus H39 AgabiH39|024350
Agaricus bisporus var bisporus H97 AgabiH97|006800
Agaricus bisporus var bisporus H97 AgabiH97|024350
Rhodonia placenta FPRL280 RhoplFPRL280|159_10 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|261_10

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|159_10
MPGVLHKVSKRTQNPDVFGHIPGIPVGERWESRQACSDAAVHPGILAGIYGRKDTGAFSVALSGGYEDDVDYGYK
FTYTGCGGRDTGGDKKVPQLRMGPQVFDQTFEDNPRNMALKVSSMTGKPVRVVRGFKLESDWAPADGYRYDGLYK
VIRAWREQGRAGHLVCKYEFVRLPDQPPIPRREGNWKLKLPKNRNAKRRETTPIPEPKFEGIPVAGPSTARSRGP
PHPAVGVIRRPLPASDEDDDHKDVYASETQSDDDTAASTSKPHVAHRAQVELPHRVVPAGSATAARREDVPSMGR
TRIPDVQARRPMQPGAPVPTSGARQDVRGSSMLQRAPDVPRRPLPASGTSTQAAARPSVPKPAASTRRPLPLVEI
ASPPAQTSFPLKRTILPKFRKYPKPSTHGTDGEPSSKRPRVDSNGNARI*
Coding >RhoplFPRL280|159_10
ATGCCTGGGGTACTTCATAAAGTGTCTAAGCGAACACAAAATCCTGATGTCTTCGGTCACATCCCCGGAATACCT
GTGGGAGAGCGCTGGGAATCAAGGCAAGCCTGCAGCGACGCTGCCGTGCACCCCGGAATACTGGCCGGGATATAC
GGTCGCAAAGACACTGGCGCGTTCAGCGTCGCGCTCTCGGGAGGATATGAGGACGATGTCGACTACGGATATAAA
TTTACGTATACTGGATGCGGGGGACGCGACACTGGGGGCGACAAGAAGGTCCCCCAGCTCCGAATGGGTCCTCAA
GTGTTTGACCAGACATTCGAAGACAATCCGCGCAACATGGCATTGAAGGTGTCTTCCATGACGGGAAAGCCTGTC
CGCGTCGTGAGAGGCTTCAAACTCGAGTCCGACTGGGCGCCTGCAGACGGGTACCGCTACGATGGACTGTACAAA
GTTATAAGAGCATGGCGTGAGCAGGGCCGAGCAGGCCACCTCGTCTGCAAGTACGAATTTGTCCGCCTCCCCGAC
CAGCCGCCCATTCCGCGTCGCGAGGGCAACTGGAAGCTCAAGCTGCCCAAGAATCGCAATGCGAAACGCCGGGAG
ACCACCCCGATCCCTGAGCCCAAGTTCGAGGGAATACCTGTGGCAGGTCCATCGACGGCTCGTAGCCGCGGTCCG
CCGCATCCTGCTGTTGGCGTAATCAGGCGACCGCTACCTGCGAGTGACGAGGACGATGATCACAAGGATGTATAT
GCTTCGGAGACTCAGTCAGACGATGATACGGCGGCCTCAACGTCTAAGCCACACGTCGCGCATCGTGCACAAGTT
GAGCTACCGCATCGTGTCGTTCCGGCTGGCTCTGCCACTGCCGCTCGTCGGGAGGACGTGCCATCTATGGGCAGA
ACTCGTATTCCGGATGTCCAGGCTCGGCGTCCCATGCAACCCGGGGCACCAGTCCCCACGTCTGGCGCACGGCAG
GATGTCCGAGGATCTTCGATGCTCCAACGCGCCCCTGATGTGCCGCGGCGTCCCTTGCCTGCAAGTGGCACATCC
ACGCAGGCGGCAGCGCGGCCCTCGGTGCCCAAGCCTGCCGCCTCAACGCGCCGGCCACTGCCCCTCGTCGAGATA
GCGTCGCCCCCCGCGCAGACATCATTCCCGTTGAAACGTACGATCCTGCCAAAGTTCAGGAAGTACCCCAAGCCG
TCGACACATGGCACGGATGGCGAGCCGTCGTCTAAGCGCCCGCGGGTGGACAGCAATGGCAATGCCCGTATTTGA
Transcript >RhoplFPRL280|159_10
ATGCCTGGGGTACTTCATAAAGTGTCTAAGCGAACACAAAATCCTGATGTCTTCGGTCACATCCCCGGAATACCT
GTGGGAGAGCGCTGGGAATCAAGGCAAGCCTGCAGCGACGCTGCCGTGCACCCCGGAATACTGGCCGGGATATAC
GGTCGCAAAGACACTGGCGCGTTCAGCGTCGCGCTCTCGGGAGGATATGAGGACGATGTCGACTACGGATATAAA
TTTACGTATACTGGATGCGGGGGACGCGACACTGGGGGCGACAAGAAGGTCCCCCAGCTCCGAATGGGTCCTCAA
GTGTTTGACCAGACATTCGAAGACAATCCGCGCAACATGGCATTGAAGGTGTCTTCCATGACGGGAAAGCCTGTC
CGCGTCGTGAGAGGCTTCAAACTCGAGTCCGACTGGGCGCCTGCAGACGGGTACCGCTACGATGGACTGTACAAA
GTTATAAGAGCATGGCGTGAGCAGGGCCGAGCAGGCCACCTCGTCTGCAAGTACGAATTTGTCCGCCTCCCCGAC
CAGCCGCCCATTCCGCGTCGCGAGGGCAACTGGAAGCTCAAGCTGCCCAAGAATCGCAATGCGAAACGCCGGGAG
ACCACCCCGATCCCTGAGCCCAAGTTCGAGGGAATACCTGTGGCAGGTCCATCGACGGCTCGTAGCCGCGGTCCG
CCGCATCCTGCTGTTGGCGTAATCAGGCGACCGCTACCTGCGAGTGACGAGGACGATGATCACAAGGATGTATAT
GCTTCGGAGACTCAGTCAGACGATGATACGGCGGCCTCAACGTCTAAGCCACACGTCGCGCATCGTGCACAAGTT
GAGCTACCGCATCGTGTCGTTCCGGCTGGCTCTGCCACTGCCGCTCGTCGGGAGGACGTGCCATCTATGGGCAGA
ACTCGTATTCCGGATGTCCAGGCTCGGCGTCCCATGCAACCCGGGGCACCAGTCCCCACGTCTGGCGCACGGCAG
GATGTCCGAGGATCTTCGATGCTCCAACGCGCCCCTGATGTGCCGCGGCGTCCCTTGCCTGCAAGTGGCACATCC
ACGCAGGCGGCAGCGCGGCCCTCGGTGCCCAAGCCTGCCGCCTCAACGCGCCGGCCACTGCCCCTCGTCGAGATA
GCGTCGCCCCCCGCGCAGACATCATTCCCGTTGAAACGTACGATCCTGCCAAAGTTCAGGAAGTACCCCAAGCCG
TCGACACATGGCACGGATGGCGAGCCGTCGTCTAAGCGCCCGCGGGTGGACAGCAATGGCAATGCCCGTATTTGA
Gene >RhoplFPRL280|159_10
ATGCCTGGGGTACTTCATAAAGTGTCTAAGCGAACACAAAATCCGTATGCACGCTCCATTGGTAGTGCGATGAGT
GTTCGCTGAATCTTGCAGTGATGTCTTCGGTCACATCCCCGGAATACCTGTGGGAGAGCGCTGGGAATCAAGGTA
GGCCATTTCTCGCGTTGTGGCTAGAAGACACATGTTTTTACCGGAGCAGGCAAGCCTGCAGCGACGCTGCCGTGC
ACCCCGGAATACTGGCCGGGATATACGGTCGCAAAGACACTGGCGCGTTCAGCGTCGCGCTCTCGGGAGGATATG
AGGACGATGTCGACTACGGATATAAATTGTATGTCATCCGCTCGTTTTAAATGCATATGATCTTACTGTATGGTC
AGTACGTATACTGGATGCGGGGGACGCGACACTGGGGGCGACAAGAAGGCGGGCGATACTGTTAATCTAGTAAAG
TTCTGCTGACTGAACCTGTAGGTCCCCCAGCTCCGAATGGGTCCTCAAGTGTTTGACCAGACATTCGAAGACAAT
CCGCGCAACATGGCATTGAAGGTAATTCGAACTTTCTGAGTCTGGCTGGCTTGACGTTCGCATCGGTAGGTGTCT
TCCATGACGGGAAAGCCTGTCCGCGTCGTGAGAGGCTTCAAACTCGAGTCCGACTGGGCGCCTGCAGACGGGTAC
ATTGTCTTCCTACCCCTTCGTTGCACTCGGACGTTCTGAAGCCTTGTTAGGTACCGCTACGATGGACTGTACAAA
GTTATAAGAGTAAGTTTCCACATATAACCATTAGCGTTCATCTCCAATACTTTGCTGCGATGCGCCCCCGGTTAT
TCTCGCATCAGAGTTAGTATTAACAACCTTCGTAGGCATGGCGTGAGCAGGGCCGAGCAGGCCACCTCGTCTGCA
AGTACGAATTTGTCGTACGTATTCTACCCTTTTCTGAGTCATTGTGAACCACATCTTAACTCGTTCTCATAGCGC
CTCCCCGACCAGCCGCCCATTCCGCGTCGCGAGGGCAACTGGAAGCTCAAGCTGCCCAAGAATCGCAATGCGAAA
CGCCGGGAGACCACCCCGATCCCTGAGCCCAAGTTCGAGGGAATACCTGTGGCAGGTCCATCGACGGCTCGTAGC
CGCGGTCCGCCGCATCCTGCTGTTGGCGTAATCAGGCGACCGCTACCTGCGAGTGACGAGGACGATGATCACAAG
GATGTATATGCTTCGGAGACTCAGTCAGACGATGATACGGCGGCCTCAACGTCTAAGCCACACGTCGCGCATCGT
GCACAAGTTGAGCTACCGCATCGTGTCGTTCCGGCTGGCTCTGCCACTGCCGCTCGTCGGGAGGACGTGCCATCT
ATGGGCAGAACTCGTATTCCGGATGTCCAGGCTCGGCGTCCCATGCAACCCGGGGCACCAGTCCCCACGTCTGGC
GCACGGCAGGATGTCCGAGGATCTTCGATGCTCCAACGCGCCCCTGATGTGCCGCGGCGTCCCTTGCCTGCAAGT
GGCACATCCACGCAGGCGGCAGCGCGGCCCTCGGTGCCCAAGCCTGCCGCCTCAACGCGCCGGCCACTGCCCCTC
GTCGAGATAGCGTCGCCCCCCGCGCAGACATCATTCCCGTTGAAACGTACGATCCTGCCAAAGTTCAGGAAGTAC
CCCAAGCCGTCGACACATGGCACGGATGGCGAGCCGTCGTCTAAGCGCCCGCGGGTGGACAGCAATGGCAATGCC
CGTATTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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