Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|117_16
Gene name
LocationNODE_117:42967..44242
Strand+
Gene length (bp)1275
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06602 Myotub-related Myotubularin-like phosphatase domain 1.3E-09 191 248

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|117_16
MSPRVFEGGCLSQCHLWRPVFCPLDKEMAAVEQYYTYDIVHDEHRIKGSHLNYYERFIENNTAHGRTALIVPHNP
KERYTQKTTFMDAIKVAKVEGVLCSKAGSIASGTVHLTAHHLIFHYDDPAKEEMWIPYPLISLVTRLPLTLQGSC
PLTIRTRTFEAASLLFGSEREAIDVFDSVKELTVATSVTQLYAFYYVPNPPYTANNGWSLYSVREEFGRMGVGSR
TKAWRFTDINKDYSVCCSSSRCLIGSFMTYSPYSSPRHIPRGSWYQLE*
Coding >RhoplFPRL280|117_16
ATGTCGCCGCGCGTGTTCGAAGGCGGCTGTCTGAGTCAATGTCACCTATGGCGTCCTGTTTTTTGTCCGCTGGAT
AAGGAGATGGCCGCAGTCGAACAGTACTACACTTACGACATCGTGCATGACGAGCATCGAATCAAAGGCAGTCAC
CTCAATTATTATGAGAGGTTTATTGAAAACAATACCGCCCATGGACGCACGGCTTTGATCGTGCCGCATAACCCT
AAGGAGCGTTATACACAGAAAACTACCTTCATGGACGCTATCAAGGTCGCAAAGGTCGAAGGCGTGCTATGCAGC
AAGGCAGGGAGTATCGCGTCCGGCACGGTGCACTTGACTGCCCACCATCTCATATTCCACTATGACGACCCAGCA
AAGGAGGAGATGTGGATTCCTTATCCGCTGATATCCCTAGTGACGCGTCTACCGCTCACTCTACAAGGGTCGTGT
CCCCTTACGATCAGGACGCGCACATTTGAGGCAGCATCTCTTCTATTTGGCTCAGAGAGGGAGGCGATAGATGTA
TTCGACAGTGTAAAGGAGCTCACTGTCGCCACGTCTGTGACGCAGCTGTATGCGTTCTACTATGTGCCGAATCCA
CCGTATACTGCCAACAACGGTTGGTCTTTATATTCTGTCCGGGAAGAATTTGGCCGAATGGGCGTTGGATCGCGC
ACGAAAGCATGGAGGTTCACGGATATTAACAAAGACTATTCTGTATGTTGCTCTAGTTCACGATGTCTAATTGGT
TCATTCATGACCTACAGTCCTTATAGTTCTCCCCGACATATCCCGCGAGGCTCGTGGTACCAACTCGAATAA
Transcript >RhoplFPRL280|117_16
ATGTCGCCGCGCGTGTTCGAAGGCGGCTGTCTGAGTCAATGTCACCTATGGCGTCCTGTTTTTTGTCCGCTGGAT
AAGGAGATGGCCGCAGTCGAACAGTACTACACTTACGACATCGTGCATGACGAGCATCGAATCAAAGGCAGTCAC
CTCAATTATTATGAGAGGTTTATTGAAAACAATACCGCCCATGGACGCACGGCTTTGATCGTGCCGCATAACCCT
AAGGAGCGTTATACACAGAAAACTACCTTCATGGACGCTATCAAGGTCGCAAAGGTCGAAGGCGTGCTATGCAGC
AAGGCAGGGAGTATCGCGTCCGGCACGGTGCACTTGACTGCCCACCATCTCATATTCCACTATGACGACCCAGCA
AAGGAGGAGATGTGGATTCCTTATCCGCTGATATCCCTAGTGACGCGTCTACCGCTCACTCTACAAGGGTCGTGT
CCCCTTACGATCAGGACGCGCACATTTGAGGCAGCATCTCTTCTATTTGGCTCAGAGAGGGAGGCGATAGATGTA
TTCGACAGTGTAAAGGAGCTCACTGTCGCCACGTCTGTGACGCAGCTGTATGCGTTCTACTATGTGCCGAATCCA
CCGTATACTGCCAACAACGGTTGGTCTTTATATTCTGTCCGGGAAGAATTTGGCCGAATGGGCGTTGGATCGCGC
ACGAAAGCATGGAGGTTCACGGATATTAACAAAGACTATTCTGTATGTTGCTCTAGTTCACGATGTCTAATTGGT
TCATTCATGACCTACAGTCCTTATAGTTCTCCCCGACATATCCCGCGAGGCTCGTGGTACCAACTCGAATAA
Gene >RhoplFPRL280|117_16
ATGTCGCCGCGCGTGTTCGAAGGCGGCTGTCTGAGTCAATGTCACCTATGGCGTCCTGTTTTTTGTCCGCTGGAT
AAGGAGATGGCCGCAGTCGAACAGTACTACACTTACGACATCGTGCATGACGGTAGACGACATTAGGTACGGGGT
TACGAAACGACACGTTCGCGAGACGGAAGTAGCAGCTTGAGCATCATGGGAAAGTTTAATGCAATGCGATATGTA
CGCCCCGCATGTAGAGCATCGAATCAAAGGCAGTCACCTCAATTATTATGAGAGGTTTATTGAAAACAATACCGC
CCATGGACGCACGGCTTTGATCGTGCCGCATAACCCTAAGGAGCGTTATACACAGAAAACTAGTGAGTATGCGCC
GTTATTTGCATAGCGCGTAGCTGTGGATGCGGCCAGTGACTGTAGCGGTGCAGGTAGAATGTAGCGTATGCCGCT
GTGAGTCGTGGCCGTTCTGATCGAGGACAAGCAAGTACAAGCGCCCAAGGCCTGCTTTCAGCTACATTGTCGGTC
CCATATACTAGGTTGCCTCAGCCTTCATGGACGCTATCAAGGTCGCAAAGGTTGATCGCACTTCACATATACCAT
GAACACATGTATCTTATGCCAAAGTCCTGCAGGTCGAAGGCGTGCTATGCAGCAAGGCAGGGAGTATCGCGTCCG
GCACGGTGCACTTGACTGCCCACCATCTCATATTCCACTATGACGACCCAGCAAAGGAGGAGATGTGGGTCAGTC
ATCCTCTGGTGTCTCTTCGGGTATCTGACGAACACAATTATCAGATTCCTTATCCGCTGATATCCCTAGTGACGC
GTCTACCGCTCACTCTACAAGGGTCGTGTCCCCTTACGATCAGGACGCGCACATTTGAGGCAGCATCTCTTCTAT
TTGGCTCAGAGAGGGAGGCGATAGATGTATTCGACAGTGTAAAGGAGCTCACTGTCGCCAGTATGTCTCTAGACT
TCGTACTGCGCACGAACTCACGCGATGATTGTAGCGTCTGTGACGCAGCTGTATGCGTTCTACTATGTGCCGAAT
CCACCGTATACTGCCAACAACGGTTGGTCTTTATATTCTGTCCGGGAAGAATTTGGCCGAATGGGCGTTGGATCG
CGCACGAAAGCATGGAGGTTCACGGATATTAACAAAGACTATTCTGTATGTTGCTCTAGTTCACGATGTCTAATT
GGTTCATTCATGACCTACAGTCCTTATAGTTCTCCCCGACATATCCCGCGAGGCTCGTGGTACCAACTCGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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