Fungal Genomics

at Utrecht University

General Properties

Protein IDRhoplFPRL280|103_4
Gene name
LocationNODE_103:44913..47559
Strand-
Gene length (bp)2646
Transcript length (bp)2094
Coding sequence length (bp)2094
Protein length (aa) 698

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07993 NAD_binding_4 Male sterility protein 3.4E-32 319 557
PF01370 Epimerase NAD dependent epimerase/dehydratase family 4.2E-07 317 574

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup44
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|020370
Agaricus bisporus var bisporus H39 AgabiH39|022990
Agaricus bisporus var bisporus H39 AgabiH39|051590
Agaricus bisporus var bisporus H39 AgabiH39|109980
Agaricus bisporus var bisporus H39 AgabiH39|271800
Agaricus bisporus var bisporus H97 AgabiH97|020370
Agaricus bisporus var bisporus H97 AgabiH97|022990
Agaricus bisporus var bisporus H97 AgabiH97|051370
Agaricus bisporus var bisporus H97 AgabiH97|051590
Agaricus bisporus var bisporus H97 AgabiH97|109980
Rhodonia placenta FPRL280 RhoplFPRL280|583_3
Rhodonia placenta FPRL280 RhoplFPRL280|465_2
Rhodonia placenta FPRL280 RhoplFPRL280|465_1
Rhodonia placenta FPRL280 RhoplFPRL280|210_1
Rhodonia placenta FPRL280 RhoplFPRL280|103_1
Rhodonia placenta FPRL280 RhoplFPRL280|150_1
Rhodonia placenta FPRL280 RhoplFPRL280|117_1
Rhodonia placenta FPRL280 RhoplFPRL280|103_4 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|86_1
Rhodonia placenta FPRL280 RhoplFPRL280|168_2
Rhodonia placenta FPRL280 RhoplFPRL280|93_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >RhoplFPRL280|103_4
MGDNTFELVVLANENSTPSVINTKVDGVDGYATSDLIAPHPTLAGYWKILGRTDDQIMHSTGEKTNPGPLENILK
QDPLVSDCLMFGRGRFQAGILVEPKKEFAFDASDKVLLAEFRNKIWPSVEKLNAYAPQHSRLFKEMILVAKPSKP
FTYTAKGSVRRGAIIKEYEDEIDAQYDAVEESAQSNIQPPDHWDQQTALVFTRSVVEKVFTVPVDDDGDIFEHGC
DSLQATWIRNTILRAIRDSTKTNTRNVSSGFIYEYPTISKLASFVLTLASGTVNGTTVDPATIVQGMRAMVAKYS
KDFPVHKGGVKSTGKVVLLTGTTGGLGCYGLQALVADPTVSRVYAFNRPARSGESLRERQRATLVDRGLDPSFLE
SKKLVLLEGDLSAPAFGLSRDVYQELGRSVTHIIHNAWRVDFKISLASFESNVYGVRALVNLALESPLSPPPKLL
FTSSIGVVQNSQDDRTVSEKPVDAILAIGNGYTQSKWVSEEILYSARAQTALKPVVIRVGQLCGSLDGSWNAHEW
FPSIVQSTPKLGCFPDDDQKAAWIPLDISAKALVDFLSAPDSIDTVHLVHPRPVSWHSLAVVAAQEFSVPLVSFK
EWVAKLEQYAEAIVKEDDTGLDSRHTSQSIHAIELIPSYKAMAQNSSGSGHAAGLPDLSVEKTSIASPTLADPSL
PQLGPAHVKSWIAYWRRVGLFA*
Coding >RhoplFPRL280|103_4
ATGGGCGACAATACCTTCGAACTTGTCGTTTTAGCAAACGAAAATAGTACACCCAGCGTGATCAACACGAAGGTA
GATGGTGTGGATGGATATGCAACATCGGATCTCATCGCGCCGCACCCCACATTGGCCGGTTACTGGAAAATCCTG
GGTCGCACAGACGATCAGATCATGCACAGCACAGGAGAGAAGACCAATCCTGGACCGCTGGAGAACATTCTTAAG
CAGGATCCTCTCGTATCGGATTGCTTGATGTTTGGTCGCGGCCGATTCCAGGCTGGCATCCTTGTGGAGCCCAAG
AAGGAATTCGCTTTCGATGCCTCTGACAAGGTCCTCCTTGCGGAATTCAGGAACAAGATTTGGCCGTCAGTTGAG
AAGTTAAACGCATACGCTCCGCAGCATTCCAGATTGTTTAAGGAGATGATACTAGTAGCAAAGCCCTCCAAGCCC
TTCACTTACACTGCGAAAGGCTCGGTTCGCCGCGGAGCTATCATCAAGGAATACGAGGACGAGATCGATGCTCAG
TATGACGCCGTAGAAGAAAGCGCTCAATCCAATATCCAGCCGCCGGACCATTGGGATCAGCAAACGGCCCTTGTG
TTCACACGCTCTGTGGTCGAGAAAGTGTTCACCGTCCCTGTCGACGATGATGGCGACATTTTCGAGCACGGATGT
GACAGTTTGCAGGCAACCTGGATCCGCAACACGATTCTTCGCGCTATACGTGACTCTACGAAGACGAACACGCGC
AATGTCAGCAGCGGGTTTATCTACGAGTACCCTACCATCTCGAAGCTCGCGTCTTTCGTTTTGACGTTAGCATCC
GGGACTGTGAACGGCACGACCGTCGATCCCGCAACGATCGTTCAAGGTATGCGTGCGATGGTGGCGAAGTACAGC
AAGGACTTCCCCGTACACAAAGGAGGAGTCAAGAGCACCGGCAAAGTAGTTCTTCTCACGGGAACGACTGGAGGT
CTCGGCTGCTATGGGCTGCAGGCCCTCGTCGCTGACCCCACTGTCTCCCGCGTCTATGCTTTCAACAGACCAGCA
CGGAGCGGGGAGTCCTTGCGTGAAAGGCAGAGGGCCACTCTAGTGGACCGAGGGCTTGACCCGTCTTTCCTGGAA
TCGAAGAAGCTCGTCTTGCTCGAAGGCGATCTCTCTGCACCCGCGTTCGGGTTGTCCCGCGATGTGTACCAAGAG
CTCGGCCGATCCGTTACGCATATTATCCATAATGCGTGGCGTGTGGACTTCAAAATCTCACTCGCGTCTTTCGAG
TCGAACGTATACGGAGTACGCGCTCTCGTCAACCTCGCCCTAGAATCTCCTCTATCTCCGCCCCCCAAGCTTCTC
TTCACGAGTTCCATCGGTGTCGTGCAGAATAGCCAGGACGATAGGACTGTCAGCGAGAAGCCCGTAGATGCCATA
CTCGCCATCGGCAATGGGTATACGCAGTCCAAATGGGTATCTGAAGAAATACTGTACAGTGCCAGAGCCCAGACT
GCGCTCAAGCCAGTCGTCATACGAGTAGGGCAGCTATGCGGAAGTCTCGATGGGTCGTGGAACGCGCACGAGTGG
TTCCCCTCCATTGTACAGAGTACACCAAAGCTTGGGTGCTTCCCAGACGACGACCAGAAAGCTGCCTGGATACCA
CTCGACATCTCTGCGAAGGCGCTGGTGGATTTCCTTTCGGCTCCTGACTCCATCGACACGGTGCATCTGGTCCAC
CCGCGACCTGTTTCGTGGCACTCGCTTGCCGTGGTCGCAGCGCAGGAGTTCTCCGTGCCGCTCGTCTCATTCAAA
GAATGGGTGGCTAAATTGGAGCAGTACGCCGAGGCCATAGTGAAGGAGGATGACACCGGACTTGATTCTCGCCAC
ACTTCGCAAAGCATCCATGCCATAGAGCTGATTCCGTCGTATAAGGCGATGGCGCAGAATTCGTCGGGCAGCGGA
CATGCGGCGGGTTTGCCAGATCTCTCGGTGGAGAAGACTAGCATTGCATCGCCTACCTTGGCGGATCCCTCATTG
CCTCAGCTCGGTCCCGCCCATGTTAAAAGTTGGATTGCGTACTGGCGCAGGGTGGGGCTGTTCGCGTGA
Transcript >RhoplFPRL280|103_4
ATGGGCGACAATACCTTCGAACTTGTCGTTTTAGCAAACGAAAATAGTACACCCAGCGTGATCAACACGAAGGTA
GATGGTGTGGATGGATATGCAACATCGGATCTCATCGCGCCGCACCCCACATTGGCCGGTTACTGGAAAATCCTG
GGTCGCACAGACGATCAGATCATGCACAGCACAGGAGAGAAGACCAATCCTGGACCGCTGGAGAACATTCTTAAG
CAGGATCCTCTCGTATCGGATTGCTTGATGTTTGGTCGCGGCCGATTCCAGGCTGGCATCCTTGTGGAGCCCAAG
AAGGAATTCGCTTTCGATGCCTCTGACAAGGTCCTCCTTGCGGAATTCAGGAACAAGATTTGGCCGTCAGTTGAG
AAGTTAAACGCATACGCTCCGCAGCATTCCAGATTGTTTAAGGAGATGATACTAGTAGCAAAGCCCTCCAAGCCC
TTCACTTACACTGCGAAAGGCTCGGTTCGCCGCGGAGCTATCATCAAGGAATACGAGGACGAGATCGATGCTCAG
TATGACGCCGTAGAAGAAAGCGCTCAATCCAATATCCAGCCGCCGGACCATTGGGATCAGCAAACGGCCCTTGTG
TTCACACGCTCTGTGGTCGAGAAAGTGTTCACCGTCCCTGTCGACGATGATGGCGACATTTTCGAGCACGGATGT
GACAGTTTGCAGGCAACCTGGATCCGCAACACGATTCTTCGCGCTATACGTGACTCTACGAAGACGAACACGCGC
AATGTCAGCAGCGGGTTTATCTACGAGTACCCTACCATCTCGAAGCTCGCGTCTTTCGTTTTGACGTTAGCATCC
GGGACTGTGAACGGCACGACCGTCGATCCCGCAACGATCGTTCAAGGTATGCGTGCGATGGTGGCGAAGTACAGC
AAGGACTTCCCCGTACACAAAGGAGGAGTCAAGAGCACCGGCAAAGTAGTTCTTCTCACGGGAACGACTGGAGGT
CTCGGCTGCTATGGGCTGCAGGCCCTCGTCGCTGACCCCACTGTCTCCCGCGTCTATGCTTTCAACAGACCAGCA
CGGAGCGGGGAGTCCTTGCGTGAAAGGCAGAGGGCCACTCTAGTGGACCGAGGGCTTGACCCGTCTTTCCTGGAA
TCGAAGAAGCTCGTCTTGCTCGAAGGCGATCTCTCTGCACCCGCGTTCGGGTTGTCCCGCGATGTGTACCAAGAG
CTCGGCCGATCCGTTACGCATATTATCCATAATGCGTGGCGTGTGGACTTCAAAATCTCACTCGCGTCTTTCGAG
TCGAACGTATACGGAGTACGCGCTCTCGTCAACCTCGCCCTAGAATCTCCTCTATCTCCGCCCCCCAAGCTTCTC
TTCACGAGTTCCATCGGTGTCGTGCAGAATAGCCAGGACGATAGGACTGTCAGCGAGAAGCCCGTAGATGCCATA
CTCGCCATCGGCAATGGGTATACGCAGTCCAAATGGGTATCTGAAGAAATACTGTACAGTGCCAGAGCCCAGACT
GCGCTCAAGCCAGTCGTCATACGAGTAGGGCAGCTATGCGGAAGTCTCGATGGGTCGTGGAACGCGCACGAGTGG
TTCCCCTCCATTGTACAGAGTACACCAAAGCTTGGGTGCTTCCCAGACGACGACCAGAAAGCTGCCTGGATACCA
CTCGACATCTCTGCGAAGGCGCTGGTGGATTTCCTTTCGGCTCCTGACTCCATCGACACGGTGCATCTGGTCCAC
CCGCGACCTGTTTCGTGGCACTCGCTTGCCGTGGTCGCAGCGCAGGAGTTCTCCGTGCCGCTCGTCTCATTCAAA
GAATGGGTGGCTAAATTGGAGCAGTACGCCGAGGCCATAGTGAAGGAGGATGACACCGGACTTGATTCTCGCCAC
ACTTCGCAAAGCATCCATGCCATAGAGCTGATTCCGTCGTATAAGGCGATGGCGCAGAATTCGTCGGGCAGCGGA
CATGCGGCGGGTTTGCCAGATCTCTCGGTGGAGAAGACTAGCATTGCATCGCCTACCTTGGCGGATCCCTCATTG
CCTCAGCTCGGTCCCGCCCATGTTAAAAGTTGGATTGCGTACTGGCGCAGGGTGGGGCTGTTCGCGTGA
Gene >RhoplFPRL280|103_4
ATGGGCGACAATACCTTCGAACTTGTCGTTTTAGTACGTCGGCATGATTATTAGAGGTACATAACGACAGTCTGA
CGTATTTCCAATTTTGCATCAAATCAGGCAAACGAAAATAGTACACCCAGCGTGATCAACACGAAGGTAGATGGT
GTGGATGGATATGCAACATCGGATCTCATCGCGCCGCACCCCACATTGGCCGGTTACTGGAAAATCCTGGGTCGC
ACAGACGATCAGATCATGCACAGCACAGGAGAGAAGGTGCGTCGATCCCTCCGTTTGTTCAGTCCATGGCTCAGT
TCCCTGTGTGCAGACCAATCCTGGACCGCTGGGTATGCCATATATCAAGGATGATCCGGAGATCTAGCTCGTACT
GATATTCGCACAGAGAACATTCTTAAGCAGGATCCTCTCGTATCGGATTGCTTGATGTTTGGTCGCGGCCGATTC
CAGGCTGGCATCCTTGTGGAGCCCAAGAAGGAATTCGCTTTCGATGCCTCTGACAAGGTCCTCCTTGCGGAATTC
AGGAACAAGATTTGGTGCGCGTGTCCGAGCTGTTAGCTTGTATCAGTACTGATTTTGCGCATAGGCCGTCAGTTG
AGAAGTTAAACGCATACGCTCCGCAGCATTCCAGATTGTTTAAGGAGGTGGGTTCGCGCTTACGCAGCGTTTGCC
TCTGACTCAACGTGGGACTTCCCTCAGATGATACTAGTAGCAAAGCCCTCCAAGCCCTTCACTTACACTGCGAAA
GGCTCGGTTCGCCGCGGAGCTATCATCAAGGAATACGAGGACGAGATCGATGCTCAGTATGACGCCGTAGAAGAA
AGCGCTCAATCCAATATCCAGCCGCCGGACCATTGGGATCAGCAAACGGCCCTTGTGTTCACACGCTCTGTGGTC
GAGAAAGTGTTCACCGTCCCTGTCGACGATGATGGCGACATTTTCGAGCACGGATGTGACAGGTGAGTATCCGGC
TCTCTACCTAGGTAACTCGCGACTTCATATTGCCTTCAGTTTGCAGGCAACCTGGATCCGCAACACGATTCTTCG
CGCTATACGTGACTCTACGAAGACGAACACGCGCAATGTCAGCAGCGGGTTTATCTACGAGTACCCTACCATCTC
GAAGCTCGCGTCTTTCGTTTTGACGTTAGCATCCGGGACTGTGAACGGCACGACCGTCGATCCCGCAACGATCGT
TCAAGGTATGCGTGCGATGGTGGCGAAGTACAGCAAGGACTTCCCCGTACACAAAGGAGGAGTCAAGAGCACCGG
CAAAGTAGTTCTTCTCACGGGAACGACTGGAGGTCTCGGCTGCTATGGGCTGCAGGCCCTCGTCGCTGACCCCAC
TGTCTCCCGCGTCTATGCTTTCAACAGACCAGCACGGAGCGGGGAGTCCTTGCGTGAAAGGCAGAGGGCCACTCT
AGTGGACCGAGGGCTTGACCCGTCTTTCCTGGAATCGAAGAAGCTCGTCTTGCTCGAAGGCGATCTCTCTGCACC
CGCGTTCGGGTTGTCCCGCGATGTGTACCAAGAGGTGAGTGGCGAAGACATCTTTGCTTACAGGGCTATCCTGAT
TAGCTGGGCAGCTCGGCCGATCCGTTACGCATATTATCCATAATGGTATTTTCTCCGTCGTTTCTGCTGTTGGCC
CCTCCTCATCTGACTGGCTACAGCGTGGCGTGTGGACTTCAAAATCTCACTCGCGTCTTTCGAGTCGAACGTATA
CGGAGTACGCGCTCTCGTCAACCTCGCCCTAGAATCTCCTCTATCTCCGCCCCCCAAGCTTCTCTTCACGAGTTC
CATCGGTGTCGTGCAGAGTTAGTCATTTTTTTCTCGTCATCGCCGTCCCTCCCCGCGGAACTAATCCGTTTCCGT
AGATAGCCAGGACGATAGGACTGTCAGCGAGAAGCCCGTAGATGCCATACTCGCCATCGGCAATGGGTATACGCA
GTCCAAATGGGTATCTGAAGAAATACTGTACAGTGCCAGAGCCCAGACTGCGCTCAAGCCAGTCGTCATACGAGT
AGGGCAGCTATGCGGAAGTCTCGATGGGTCGTGGAACGCGCACGAGTGGTTCCCCTCCATTGTACAGAGTACACC
AAAGCTTGGGTGCTTCCCAGACGACGACCAGGTATGTCCCATTTTGTACTGTGCGCGTCTAACAGGTGTTGAGAA
CCTTTGCAGAAAGCTGCCTGGATACCACTCGACATCTCTGCGAAGGCGCTGGTGGATTTCCTTTCGGCTCCTGAC
TCCATCGACACGGTGCATCTGGTCCACCCGCGACCTGTTTCGTGGCACTCGCTTGCCGTGGTCGCAGCGCAGGAG
TTCTCCGTGCCGCTCGTCTCATTCAAAGAATGGGTGGCTAAATTGGAGCAGTACGCCGAGGCCATAGTGAAGGAG
GATGACACCGGACTTGATTCTCGCCACACTTCGCAAAGCATCCATGCCATAGAGCTGATTCCGTCGTATAAGGCG
ATGGCGCAGAATTCGTCGGGCAGCGGACATGCGGCGGGTTTGCCAGATCTCTCGGTGGAGAAGACTAGCATTGCA
TCGCCTACCTTGGCGGATCCCTCATTGCCTCAGCTCGGTCCCGCCCATGTTAAAAGTTGGATTGCGTACTGGCGC
AGGGTGGGGCTGTTCGCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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