Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04998
Short nameRNA_pol_Rpb1_5
Long nameRNA polymerase Rpb1, domain 5
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
RhoplFPRL280|40_3 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.2E-87 11 349
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 4.5E-72 351 518
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 3.0E-37 521 703
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 2.2E-30 731 834
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 9.8E-84 841 1335
RhoplFPRL280|4_111 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.5E-26 10 245
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.9E-49 479 670
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 1.0E-36 674 852
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 5.9E-20 915 1003
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 4.7E-83 1010 1651
RhoplFPRL280|80_2 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 4.9E-108 14 349
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 3.3E-71 351 517
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.5E-47 521 680
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 7.4E-35 710 811
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 1.5E-104 818 1413
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 9.6E-68 884 1069
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 4.2E-49 1154 1289
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.1E+01 1550 1562
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.1E-02 1606 1619
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.3E-02 1620 1633
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.2E-02 1634 1647
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.0E-02 1648 1661
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 4.4E+00 1673 1685
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.4E+01 1686 1699

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