© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g989.t1 |
| Gene name | |
| Location | scaffold_01:2625345..2626929 |
| Strand | + |
| Gene length (bp) | 1584 |
| Transcript length (bp) | 1584 |
| Coding sequence length (bp) | 1584 |
| Protein length (aa) | 528 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 3.5E-21 | 1 | 202 |
| PF00324 | AA_permease | Amino acid permease | 2.0E-23 | 244 | 462 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 107 | 124 | 17 |
| 4 | 137 | 159 | 22 |
| 5 | 290 | 312 | 22 |
| 6 | 339 | 358 | 19 |
| 7 | 368 | 390 | 22 |
| 8 | 410 | 432 | 22 |
| 9 | 442 | 461 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g989.t1 MAVGPTIGTGLFVGAGQALAVGGPASLLMSYIILSLLTFAMTTSVAEVSSHMPSQHGTLVTNGYLYMSSSLAFAS AYLRWYTLALFVPYEITSAMVNLGLWKPGSTIAIRLTIITTIVVGFNFLPERLFKSSERVFTMMKIGTMATLFVL SVALGLGGVDAQPPWGFKYWKTPGAMNEYLVRGIWGRLLGFLQCLLDGSIAFTFAPELIVHRAEMPASLVPASLG ETTMLSAGIAGRVTSDVAQTALPYIMSSLAMGVMAPFNETRLTNNGTGSGLSPYLIGLSDAKIQIVPTIAMIAIL LSAVASGRSFLYLSSRTLCAMSELGHAPSIFATRNRWNVPYLAVVASALFCCLAFASVKVPSTIMNTYLLRLVTS AGFISSLVSCNIHHHFNRRLRLNNITKRYNFSSQPVGTYFGMIISTLLLLGGGLWAGPKGNIIGSRAARLITSYV NIGVFGLLFLVHRLQDFLPAVEVGRQEDLGGHNHGDHEGPRDSRTQKTYPHRGKLDVIPEGSGTFELRLSQTTFS EP* |
| Coding | >Pro_DTO377G3_2|g989.t1 ATGGCTGTCGGTCCGACCATCGGCACTGGTTTGTTCGTCGGCGCTGGCCAGGCCCTCGCGGTTGGCGGACCTGCC TCGCTACTCATGTCGTACATAATCCTATCTCTTTTGACCTTTGCCATGACCACGAGCGTGGCCGAAGTATCCAGT CACATGCCATCGCAACATGGCACACTCGTTACCAATGGCTACCTGTACATGTCAAGCAGTCTGGCATTTGCTTCA GCATACCTCCGCTGGTATACCCTCGCTTTGTTTGTTCCATACGAAATTACATCGGCGATGGTCAATCTTGGCCTA TGGAAACCGGGTTCCACTATCGCAATCAGATTGACTATCATCACGACCATCGTTGTTGGCTTCAACTTTCTGCCA GAAAGACTCTTCAAAAGTTCCGAGCGAGTATTCACTATGATGAAGATCGGCACAATGGCGACCCTGTTCGTGCTC TCTGTGGCCCTGGGTCTTGGGGGTGTGGATGCACAGCCCCCATGGGGATTCAAATACTGGAAAACTCCGGGTGCC ATGAACGAGTATCTAGTTCGAGGCATATGGGGACGACTCCTGGGTTTCTTGCAATGCCTCCTTGATGGCTCTATC GCTTTCACGTTTGCCCCTGAGCTGATTGTGCACCGAGCGGAAATGCCAGCATCACTCGTGCCAGCATCACTTGGC GAAACAACGATGCTAAGCGCCGGTATCGCCGGTAGAGTCACGTCCGACGTTGCTCAAACGGCATTGCCGTATATC ATGAGCTCCCTGGCCATGGGCGTTATGGCTCCTTTCAATGAGACGCGCCTAACGAACAACGGAACAGGTTCTGGG CTTTCCCCTTACCTGATCGGACTCAGTGATGCAAAAATTCAAATTGTACCTACGATCGCGATGATTGCAATCCTG CTCTCCGCGGTGGCTTCTGGGCGATCCTTTTTGTATCTCTCTTCTCGCACACTTTGTGCAATGTCAGAGCTCGGT CATGCGCCCTCGATATTTGCCACTCGCAACCGTTGGAATGTTCCGTATTTGGCCGTTGTAGCATCCGCCCTGTTC TGCTGTCTTGCATTTGCTTCCGTGAAAGTGCCGAGTACCATCATGAACACCTATCTCCTTCGCCTCGTTACGAGC GCCGGTTTCATTTCCTCGCTTGTGTCATGCAACATCCATCATCACTTCAATCGCCGGCTCCGATTGAACAACATC ACCAAACGGTATAATTTCTCTTCACAGCCAGTCGGTACATACTTCGGGATGATCATCAGTACCCTACTGCTGCTG GGCGGCGGATTGTGGGCAGGACCGAAGGGAAATATTATTGGGTCCCGAGCAGCCAGACTGATCACCTCATATGTC AATATCGGGGTATTCGGCCTGCTGTTCTTGGTCCATCGATTGCAAGACTTTTTGCCCGCTGTCGAAGTTGGAAGA CAAGAGGATCTGGGTGGACACAACCATGGCGACCATGAAGGACCAAGAGATTCTCGGACACAGAAGACATATCCG CATCGGGGGAAACTCGATGTAATCCCAGAGGGTTCCGGGACATTTGAGTTGCGACTCAGCCAGACCACGTTCTCG GAGCCTTGA |
| Transcript | >Pro_DTO377G3_2|g989.t1 ATGGCTGTCGGTCCGACCATCGGCACTGGTTTGTTCGTCGGCGCTGGCCAGGCCCTCGCGGTTGGCGGACCTGCC TCGCTACTCATGTCGTACATAATCCTATCTCTTTTGACCTTTGCCATGACCACGAGCGTGGCCGAAGTATCCAGT CACATGCCATCGCAACATGGCACACTCGTTACCAATGGCTACCTGTACATGTCAAGCAGTCTGGCATTTGCTTCA GCATACCTCCGCTGGTATACCCTCGCTTTGTTTGTTCCATACGAAATTACATCGGCGATGGTCAATCTTGGCCTA TGGAAACCGGGTTCCACTATCGCAATCAGATTGACTATCATCACGACCATCGTTGTTGGCTTCAACTTTCTGCCA GAAAGACTCTTCAAAAGTTCCGAGCGAGTATTCACTATGATGAAGATCGGCACAATGGCGACCCTGTTCGTGCTC TCTGTGGCCCTGGGTCTTGGGGGTGTGGATGCACAGCCCCCATGGGGATTCAAATACTGGAAAACTCCGGGTGCC ATGAACGAGTATCTAGTTCGAGGCATATGGGGACGACTCCTGGGTTTCTTGCAATGCCTCCTTGATGGCTCTATC GCTTTCACGTTTGCCCCTGAGCTGATTGTGCACCGAGCGGAAATGCCAGCATCACTCGTGCCAGCATCACTTGGC GAAACAACGATGCTAAGCGCCGGTATCGCCGGTAGAGTCACGTCCGACGTTGCTCAAACGGCATTGCCGTATATC ATGAGCTCCCTGGCCATGGGCGTTATGGCTCCTTTCAATGAGACGCGCCTAACGAACAACGGAACAGGTTCTGGG CTTTCCCCTTACCTGATCGGACTCAGTGATGCAAAAATTCAAATTGTACCTACGATCGCGATGATTGCAATCCTG CTCTCCGCGGTGGCTTCTGGGCGATCCTTTTTGTATCTCTCTTCTCGCACACTTTGTGCAATGTCAGAGCTCGGT CATGCGCCCTCGATATTTGCCACTCGCAACCGTTGGAATGTTCCGTATTTGGCCGTTGTAGCATCCGCCCTGTTC TGCTGTCTTGCATTTGCTTCCGTGAAAGTGCCGAGTACCATCATGAACACCTATCTCCTTCGCCTCGTTACGAGC GCCGGTTTCATTTCCTCGCTTGTGTCATGCAACATCCATCATCACTTCAATCGCCGGCTCCGATTGAACAACATC ACCAAACGGTATAATTTCTCTTCACAGCCAGTCGGTACATACTTCGGGATGATCATCAGTACCCTACTGCTGCTG GGCGGCGGATTGTGGGCAGGACCGAAGGGAAATATTATTGGGTCCCGAGCAGCCAGACTGATCACCTCATATGTC AATATCGGGGTATTCGGCCTGCTGTTCTTGGTCCATCGATTGCAAGACTTTTTGCCCGCTGTCGAAGTTGGAAGA CAAGAGGATCTGGGTGGACACAACCATGGCGACCATGAAGGACCAAGAGATTCTCGGACACAGAAGACATATCCG CATCGGGGGAAACTCGATGTAATCCCAGAGGGTTCCGGGACATTTGAGTTGCGACTCAGCCAGACCACGTTCTCG GAGCCTTGA |
| Gene | >Pro_DTO377G3_2|g989.t1 ATGGCTGTCGGTCCGACCATCGGCACTGGTTTGTTCGTCGGCGCTGGCCAGGCCCTCGCGGTTGGCGGACCTGCC TCGCTACTCATGTCGTACATAATCCTATCTCTTTTGACCTTTGCCATGACCACGAGCGTGGCCGAAGTATCCAGT CACATGCCATCGCAACATGGCACACTCGTTACCAATGGCTACCTGTACATGTCAAGCAGTCTGGCATTTGCTTCA GCATACCTCCGCTGGTATACCCTCGCTTTGTTTGTTCCATACGAAATTACATCGGCGATGGTCAATCTTGGCCTA TGGAAACCGGGTTCCACTATCGCAATCAGATTGACTATCATCACGACCATCGTTGTTGGCTTCAACTTTCTGCCA GAAAGACTCTTCAAAAGTTCCGAGCGAGTATTCACTATGATGAAGATCGGCACAATGGCGACCCTGTTCGTGCTC TCTGTGGCCCTGGGTCTTGGGGGTGTGGATGCACAGCCCCCATGGGGATTCAAATACTGGAAAACTCCGGGTGCC ATGAACGAGTATCTAGTTCGAGGCATATGGGGACGACTCCTGGGTTTCTTGCAATGCCTCCTTGATGGCTCTATC GCTTTCACGTTTGCCCCTGAGCTGATTGTGCACCGAGCGGAAATGCCAGCATCACTCGTGCCAGCATCACTTGGC GAAACAACGATGCTAAGCGCCGGTATCGCCGGTAGAGTCACGTCCGACGTTGCTCAAACGGCATTGCCGTATATC ATGAGCTCCCTGGCCATGGGCGTTATGGCTCCTTTCAATGAGACGCGCCTAACGAACAACGGAACAGGTTCTGGG CTTTCCCCTTACCTGATCGGACTCAGTGATGCAAAAATTCAAATTGTACCTACGATCGCGATGATTGCAATCCTG CTCTCCGCGGTGGCTTCTGGGCGATCCTTTTTGTATCTCTCTTCTCGCACACTTTGTGCAATGTCAGAGCTCGGT CATGCGCCCTCGATATTTGCCACTCGCAACCGTTGGAATGTTCCGTATTTGGCCGTTGTAGCATCCGCCCTGTTC TGCTGTCTTGCATTTGCTTCCGTGAAAGTGCCGAGTACCATCATGAACACCTATCTCCTTCGCCTCGTTACGAGC GCCGGTTTCATTTCCTCGCTTGTGTCATGCAACATCCATCATCACTTCAATCGCCGGCTCCGATTGAACAACATC ACCAAACGGTATAATTTCTCTTCACAGCCAGTCGGTACATACTTCGGGATGATCATCAGTACCCTACTGCTGCTG GGCGGCGGATTGTGGGCAGGACCGAAGGGAAATATTATTGGGTCCCGAGCAGCCAGACTGATCACCTCATATGTC AATATCGGGGTATTCGGCCTGCTGTTCTTGGTCCATCGATTGCAAGACTTTTTGCCCGCTGTCGAAGTTGGAAGA CAAGAGGATCTGGGTGGACACAACCATGGCGACCATGAAGGACCAAGAGATTCTCGGACACAGAAGACATATCCG CATCGGGGGAAACTCGATGTAATCCCAGAGGGTTCCGGGACATTTGAGTTGCGACTCAGCCAGACCACGTTCTCG GAGCCTTGA |