Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9735.t1
Gene name
Locationscaffold_70:4571..6653
Strand-
Gene length (bp)2082
Transcript length (bp)1782
Coding sequence length (bp)1782
Protein length (aa) 594

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17759 tRNA_synthFbeta Phenylalanyl tRNA synthetase beta chain CLM domain 2.1E-49 371 588
PF18262 PhetRS_B1 Phe-tRNA synthetase beta subunit B1 domain 1.4E-32 1 82
PF03483 B3_4 B3/4 domain 3.7E-24 110 260
PF03484 B5 tRNA synthetase B5 domain 1.8E-16 302 368

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0000287 magnesium ion binding Yes
GO:0004826 phenylalanine-tRNA ligase activity Yes
GO:0003723 RNA binding Yes
GO:0006432 phenylalanyl-tRNA aminoacylation Yes
GO:0043168 anion binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0032559 adenyl ribonucleotide binding No
GO:0046872 metal ion binding No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0032553 ribonucleotide binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0004812 aminoacyl-tRNA ligase activity No
GO:1901265 nucleoside phosphate binding No
GO:0071704 organic substance metabolic process No
GO:0006418 tRNA aminoacylation for protein translation No
GO:0043038 amino acid activation No
GO:0006399 tRNA metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No
GO:0044237 cellular metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0005488 binding No
GO:0043039 tRNA aminoacylation No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003676 nucleic acid binding No
GO:0016875 ligase activity, forming carbon-oxygen bonds No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0043436 oxoacid metabolic process No
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0008150 biological_process No
GO:0140098 catalytic activity, acting on RNA No
GO:0016874 ligase activity No
GO:0044281 small molecule metabolic process No
GO:0008152 metabolic process No
GO:0006082 organic acid metabolic process No
GO:0006520 cellular amino acid metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0017076 purine nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9735.t1
MPTISVDKAALFQELGRDYTTEEFDELCFEFGIELDEDTTNSDRPIVDGKQEPPQLKIEIPANRYDLLCFEGIAL
MLNIFLGQKPLPEYKLTQPAQMERIIVKEDTTKIRPYVAGAILRNIKFDQARYASFIALQDKLHQNLARQRTLVS
IGTHDLDTVKGPFTYEALPPKDIKFVPLNQTQEMDGEELMNFYEKHQQLGKYLHIIRDSPVYPVIYDSDRTVCSL
PPIINGDHSKINLNTTNVLIEITALDKTKLDIVNKMMVTMFSQYTLEPFTIEPVQIVSEHNGETRVTPDISPRIA
QAEVSYINQCCGLSLSSAEICTLLTKMAFRAKPSTTVSDIINVEIPPTRADVLHQCDIMEDVAIAYGFNSLPRAF
PNISGTVAQPLPINKLSDIVRVETAMAGWSEVLPLILCSHDENFGWLNRKDDGNTAVKLANPKTLEFQVVRTSLL
PGLLKTIRENKHHSVPMKIFEVSDVAFKDLSLERKSRNERHFAAAFYGKTSGFEIVHGLLDRIMAMLKTNFLVEG
ETPTGDSYYIKELDDPTYFPGHAASIHVCIGGKDQVIGSFGILHPTVLEKYELKYPVSTLELNVEAFM*
Coding >Pro_DTO377G3_2|g9735.t1
ATGCCCACCATCTCGGTCGACAAGGCCGCTCTTTTCCAAGAGTTGGGCCGAGATTACACCACGGAGGAGTTTGAT
GAGCTGTGTTTCGAATTTGGAATCGAGCTCGACGAAGATACTACAAACTCAGACCGCCCTATCGTCGATGGAAAG
CAAGAACCTCCGCAACTCAAGATTGAGATCCCCGCCAACCGATATGACTTGCTGTGCTTCGAGGGCATTGCGCTC
ATGTTGAACATCTTCCTGGGTCAGAAACCCCTGCCCGAGTACAAGTTGACTCAGCCAGCACAGATGGAGCGGATT
ATTGTCAAGGAAGATACCACGAAAATCAGACCCTACGTAGCTGGCGCTATTCTACGGAACATCAAGTTCGACCAG
GCTCGTTATGCGTCTTTCATTGCTCTCCAAGACAAGCTCCACCAGAACTTGGCCCGGCAACGAACCCTTGTATCA
ATCGGTACCCATGATTTGGACACCGTGAAGGGCCCCTTCACTTATGAGGCTCTCCCTCCCAAGGATATCAAGTTT
GTCCCATTGAACCAGACCCAGGAGATGGATGGCGAGGAATTGATGAACTTCTACGAGAAGCACCAACAGTTGGGC
AAGTACCTACACATCATTCGTGACTCTCCAGTCTATCCAGTCATCTACGACTCCGACCGGACTGTTTGCTCTCTG
CCACCCATTATCAACGGCGATCACTCGAAGATCAACCTGAACACCACCAATGTTTTAATTGAGATCACAGCTCTC
GATAAGACAAAGCTGGATATTGTGAACAAGATGATGGTCACCATGTTCTCCCAATATACGTTGGAGCCGTTCACC
ATCGAGCCTGTCCAGATTGTGTCTGAGCATAACGGGGAGACTCGCGTCACCCCTGACATCTCTCCCCGCATCGCT
CAGGCTGAAGTCTCGTACATCAACCAGTGCTGTGGCTTGAGCCTCAGTTCGGCAGAGATCTGTACTCTTCTCACA
AAGATGGCCTTCCGCGCCAAGCCTTCTACCACTGTCTCAGACATCATCAATGTGGAAATCCCCCCAACCCGTGCC
GATGTACTCCACCAGTGTGATATCATGGAGGATGTGGCCATTGCCTACGGTTTCAACTCGCTGCCCCGTGCGTTC
CCCAACATCTCTGGCACAGTCGCCCAACCTCTCCCTATCAACAAGCTTTCCGACATTGTTCGTGTGGAGACTGCC
ATGGCCGGTTGGTCAGAGGTGTTACCGTTGATTCTGTGCTCGCATGATGAGAACTTTGGCTGGCTGAACCGCAAG
GATGACGGAAACACCGCTGTCAAGCTGGCTAACCCCAAGACCCTTGAGTTCCAGGTGGTCCGTACCAGCCTGCTC
CCGGGTCTGCTCAAGACCATCCGTGAGAACAAGCACCACTCTGTTCCCATGAAAATATTCGAGGTCAGCGATGTT
GCCTTTAAGGATCTGTCCCTGGAGCGCAAGAGCCGCAACGAGAGACACTTTGCTGCTGCCTTCTATGGTAAAACT
AGCGGGTTTGAAATTGTCCACGGTCTTCTTGATCGTATCATGGCCATGCTTAAGACCAACTTCCTCGTCGAGGGC
GAGACCCCTACGGGCGACTCGTATTATATCAAGGAACTAGACGATCCCACTTACTTCCCCGGCCACGCTGCTTCC
ATCCACGTCTGTATTGGTGGCAAGGACCAGGTCATTGGCTCCTTCGGTATTCTGCACCCTACCGTGCTCGAGAAG
TACGAGTTGAAGTACCCAGTCAGTACTCTAGAGCTGAATGTTGAGGCTTTCATGTAG
Transcript >Pro_DTO377G3_2|g9735.t1
ATGCCCACCATCTCGGTCGACAAGGCCGCTCTTTTCCAAGAGTTGGGCCGAGATTACACCACGGAGGAGTTTGAT
GAGCTGTGTTTCGAATTTGGAATCGAGCTCGACGAAGATACTACAAACTCAGACCGCCCTATCGTCGATGGAAAG
CAAGAACCTCCGCAACTCAAGATTGAGATCCCCGCCAACCGATATGACTTGCTGTGCTTCGAGGGCATTGCGCTC
ATGTTGAACATCTTCCTGGGTCAGAAACCCCTGCCCGAGTACAAGTTGACTCAGCCAGCACAGATGGAGCGGATT
ATTGTCAAGGAAGATACCACGAAAATCAGACCCTACGTAGCTGGCGCTATTCTACGGAACATCAAGTTCGACCAG
GCTCGTTATGCGTCTTTCATTGCTCTCCAAGACAAGCTCCACCAGAACTTGGCCCGGCAACGAACCCTTGTATCA
ATCGGTACCCATGATTTGGACACCGTGAAGGGCCCCTTCACTTATGAGGCTCTCCCTCCCAAGGATATCAAGTTT
GTCCCATTGAACCAGACCCAGGAGATGGATGGCGAGGAATTGATGAACTTCTACGAGAAGCACCAACAGTTGGGC
AAGTACCTACACATCATTCGTGACTCTCCAGTCTATCCAGTCATCTACGACTCCGACCGGACTGTTTGCTCTCTG
CCACCCATTATCAACGGCGATCACTCGAAGATCAACCTGAACACCACCAATGTTTTAATTGAGATCACAGCTCTC
GATAAGACAAAGCTGGATATTGTGAACAAGATGATGGTCACCATGTTCTCCCAATATACGTTGGAGCCGTTCACC
ATCGAGCCTGTCCAGATTGTGTCTGAGCATAACGGGGAGACTCGCGTCACCCCTGACATCTCTCCCCGCATCGCT
CAGGCTGAAGTCTCGTACATCAACCAGTGCTGTGGCTTGAGCCTCAGTTCGGCAGAGATCTGTACTCTTCTCACA
AAGATGGCCTTCCGCGCCAAGCCTTCTACCACTGTCTCAGACATCATCAATGTGGAAATCCCCCCAACCCGTGCC
GATGTACTCCACCAGTGTGATATCATGGAGGATGTGGCCATTGCCTACGGTTTCAACTCGCTGCCCCGTGCGTTC
CCCAACATCTCTGGCACAGTCGCCCAACCTCTCCCTATCAACAAGCTTTCCGACATTGTTCGTGTGGAGACTGCC
ATGGCCGGTTGGTCAGAGGTGTTACCGTTGATTCTGTGCTCGCATGATGAGAACTTTGGCTGGCTGAACCGCAAG
GATGACGGAAACACCGCTGTCAAGCTGGCTAACCCCAAGACCCTTGAGTTCCAGGTGGTCCGTACCAGCCTGCTC
CCGGGTCTGCTCAAGACCATCCGTGAGAACAAGCACCACTCTGTTCCCATGAAAATATTCGAGGTCAGCGATGTT
GCCTTTAAGGATCTGTCCCTGGAGCGCAAGAGCCGCAACGAGAGACACTTTGCTGCTGCCTTCTATGGTAAAACT
AGCGGGTTTGAAATTGTCCACGGTCTTCTTGATCGTATCATGGCCATGCTTAAGACCAACTTCCTCGTCGAGGGC
GAGACCCCTACGGGCGACTCGTATTATATCAAGGAACTAGACGATCCCACTTACTTCCCCGGCCACGCTGCTTCC
ATCCACGTCTGTATTGGTGGCAAGGACCAGGTCATTGGCTCCTTCGGTATTCTGCACCCTACCGTGCTCGAGAAG
TACGAGTTGAAGTACCCAGTCAGTACTCTAGAGCTGAATGTTGAGGCTTTCATGTAG
Gene >Pro_DTO377G3_2|g9735.t1
ATGCCCACCATCTCGGTCGACAAGGCCGCTCTTTTCCAAGAGTTGGGCCGAGAGTACGTCTCTGGACTTTGTCAT
TGAACTCTACTGACCTTGCTGCAGTTACACCACGGAGGAGTTTGATGAGCTGTGTTTCGAATTTGGTAGGTTGGC
TGGGAAATTCTTGCCGGGCATGACTGACTTTGAATAGGAATCGAGCTCGACGAAGATGTACATTCTCCAAGACCC
GACCACACATAGCCAATACTGATCTTTTCAGACTACAAACTCAGACCGCCCTATCGTCGATGGAAAGCAAGAACC
TCCGCAACTCAAGATTGAGATCCCCGCCAACCGGTACGCGTGACATCCGAGGAGAACAAATGAAAGAACTTAGAC
TAAGAAGAGATCAGATATGACTTGCTGTGCTTCGAGGGCATTGCGCTCATGTTGAACATCTTCCTGGGTCAGAAA
CCCCTGCCCGAGTACAAGTTGACTCAGCCAGCACAGATGGAGCGGATTATTGTCAAGGAAGATGTTAGTACTTCA
ACACCTACTCTGCTCAGGTGGAAGGGCTCCGCTGACCAAAATAGACCACGAAAATCAGACCCTACGTAGCTGGCG
CTATTCTACGGAACATCAAGTTCGACCAGGCTCGTTATGCGTCTTTCATTGCTCTCCAAGACAAGCTCCACCAGA
ACTTGGCCCGGCAACGAACCCTTGTATCAATCGGTACCCATGATTTGGACACCGTGAAGGGCCCCTTCACTTATG
AGGCTCTCCCTCCCAAGGATATCAAGTTTGTCCCATTGAACCAGACCCAGGAGATGGATGGCGAGGAATTGATGA
ACTTCTACGAGAAGCACCAACAGTTGGGCAAGTACCTACACATCATTCGTGACTCTCCAGTCTATCCAGTCATCT
ACGACTCCGACCGGACTGTTTGCTCTCTGCCACCCATTATCAACGGCGATCACTCGAAGATCAACCTGAACACCA
CCAATGTTTTAATTGAGATCACAGCTCTCGATAAGACAAAGCTGGATATTGTGAACAAGATGATGGTCACCATGT
TCTCCCAATATACGTTGGAGCCGTTCACCATCGAGCCTGTCCAGATTGTGTCTGAGCATAACGGGGAGACTCGCG
TCACCCCTGACATCTCTCCCCGCATCGCTCAGGCTGAAGTCTCGTACATCAACCAGTGCTGTGGCTTGAGCCTCA
GTTCGGCAGAGATCTGTACTCTTCTCACAAAGATGGCCTTCCGCGCCAAGCCTTCTACCACTGTCTCAGACATCA
TCAATGTGGAAATCCCCCCAACCCGTGCCGATGTACTCCACCAGTGTGATATCATGGAGGATGTGGCCATTGCCT
ACGGTTTCAACTCGCTGCCCCGTGCGTTCCCCAACATCTCTGGCACAGTCGCCCAACCTCTCCCTATCAACAAGC
TTTCCGACATTGTTCGTGTGGAGACTGCCATGGCCGGTTGGTCAGAGGTGTTACCGTTGATTCTGTGCTCGCATG
ATGAGAACTTTGGCTGGCTGAACCGCAAGGATGACGGAAACACCGCTGTCAAGCTGGCTAACCCCAAGACCCTTG
AGTTCCAGGTGGTCCGTACCAGCCTGCTCCCGGGTCTGCTCAAGACCATCCGTGAGAACAAGCACCACTCTGTTC
CCATGAAAATATTCGAGGTCAGCGATGTTGCCTTTAAGGATCTGTCCCTGGAGCGCAAGAGCCGCAACGAGAGAC
ACTTTGCTGCTGCCTTCTATGGTAAAACTAGCGGGTTTGAAATTGTCCACGGTCTTCTTGATCGTATCATGGCCA
TGCTTAAGACCAACTTCCTCGTCGAGGGCGAGACCCCTACGGGCGACTCGTATTATATCAAGGAACTAGACGGTG
TGTACCTCCTCGAAACAGACTAAGAAATTCGCTAACAGTGTAGATCCCACTTACTTCCCCGGCCACGCTGCTTCC
ATCCACGTCTGTATTGGTGGCAAGGACCAGGTCATTGGCTCCTTCGGTATTCTGCACCCTACCGTGCTCGAGAAG
TACGAGTTGAAGTACCCAGTCAGTACTCTAGAGCTGAATGTTGAGGCTTTCATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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