Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9714.t1
Gene name
Locationscaffold_65:18479..19812
Strand+
Gene length (bp)1333
Transcript length (bp)1170
Coding sequence length (bp)1170
Protein length (aa) 390

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01758 SBF Sodium Bile acid symporter family 5.2E-52 95 290

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 56 75 19
2 87 105 18
3 125 147 22
4 160 177 17
5 187 209 22
6 230 249 19
7 264 283 19
8 295 317 22
9 356 378 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9714.t1
MAAPTGLHPTKESEYHNSILHSQPPTPTAEDVEKQESEESTAKQSAFKGLGWLDRFLALWIFLAMAVGIILGNFV
ENTGPALQKGKFVGVSIPIAIGLLVMMYPILCKVRYESLHHVFRERGVWIQIGFSIFINWIIAPLLMLALAWAFL
PDEPELREGLILVGLARCIAMVLIWTGLAGGDNEYCAILVAVNSLLQMVLFAPLAILFIKVIGHSGSQVTLSYST
AAKSVAVFLGIPLGAAIITRIVLRKITSPRWYDQVFLKWAGPWSLIGLLFTILVLFASQGRQVVHQIVSVVRVAA
PLIVYFIVVFFITLLVTYKLGFGYKLSATQSFTAASNNFELAIAVAVATFGANSNQALAATVGPLIEVPVLLGLV
YVAKFIAKRAGWKD*
Coding >Pro_DTO377G3_2|g9714.t1
ATGGCAGCCCCAACAGGTCTGCACCCGACGAAGGAATCGGAATATCATAACTCAATACTGCATAGCCAGCCGCCA
ACTCCTACTGCTGAGGATGTCGAAAAGCAAGAATCGGAAGAGTCTACAGCCAAGCAATCAGCCTTCAAAGGTCTT
GGCTGGTTAGATCGTTTTCTCGCCTTGTGGATCTTCCTTGCCATGGCCGTCGGAATTATCCTAGGCAACTTTGTT
GAAAACACGGGTCCTGCTCTCCAAAAAGGGAAATTCGTGGGGGTTTCCATCCCAATCGCAATTGGTCTCTTGGTC
ATGATGTATCCTATTCTTTGCAAAGTACGATACGAATCTTTGCACCATGTATTCCGAGAGCGTGGGGTCTGGATT
CAAATTGGGTTCAGCATCTTCATCAATTGGATTATTGCCCCTTTACTGATGCTTGCACTAGCATGGGCTTTCCTA
CCGGACGAGCCAGAACTTCGGGAGGGGTTGATTCTCGTTGGATTAGCCAGATGCATCGCTATGGTTCTTATCTGG
ACCGGTCTCGCTGGCGGTGATAATGAATATTGCGCTATTCTTGTTGCAGTAAATTCACTGCTCCAGATGGTGCTC
TTCGCTCCCTTGGCAATCCTCTTCATTAAGGTCATTGGCCACTCGGGCAGTCAAGTTACACTCTCATATTCTACC
GCTGCCAAAAGCGTGGCGGTGTTCCTTGGCATTCCATTAGGTGCCGCAATCATTACCCGCATTGTACTTCGAAAG
ATAACTAGCCCACGTTGGTACGACCAGGTTTTCCTGAAGTGGGCTGGCCCGTGGTCCCTTATTGGGCTTCTTTTT
ACGATCCTTGTGTTGTTCGCATCTCAGGGCCGCCAGGTGGTTCATCAGATTGTATCGGTCGTTCGAGTTGCCGCT
CCGCTCATCGTTTATTTTATCGTCGTCTTCTTCATCACTCTTCTTGTGACTTACAAGCTCGGGTTCGGTTACAAG
TTGTCTGCTACTCAAAGTTTCACTGCTGCCAGCAATAATTTCGAGCTTGCTATTGCTGTCGCTGTCGCAACATTT
GGTGCCAACAGCAATCAGGCGCTTGCCGCCACTGTCGGGCCATTGATTGAGGTTCCAGTACTGCTTGGCCTTGTC
TATGTTGCCAAATTCATAGCTAAGCGAGCTGGCTGGAAAGACTGA
Transcript >Pro_DTO377G3_2|g9714.t1
ATGGCAGCCCCAACAGGTCTGCACCCGACGAAGGAATCGGAATATCATAACTCAATACTGCATAGCCAGCCGCCA
ACTCCTACTGCTGAGGATGTCGAAAAGCAAGAATCGGAAGAGTCTACAGCCAAGCAATCAGCCTTCAAAGGTCTT
GGCTGGTTAGATCGTTTTCTCGCCTTGTGGATCTTCCTTGCCATGGCCGTCGGAATTATCCTAGGCAACTTTGTT
GAAAACACGGGTCCTGCTCTCCAAAAAGGGAAATTCGTGGGGGTTTCCATCCCAATCGCAATTGGTCTCTTGGTC
ATGATGTATCCTATTCTTTGCAAAGTACGATACGAATCTTTGCACCATGTATTCCGAGAGCGTGGGGTCTGGATT
CAAATTGGGTTCAGCATCTTCATCAATTGGATTATTGCCCCTTTACTGATGCTTGCACTAGCATGGGCTTTCCTA
CCGGACGAGCCAGAACTTCGGGAGGGGTTGATTCTCGTTGGATTAGCCAGATGCATCGCTATGGTTCTTATCTGG
ACCGGTCTCGCTGGCGGTGATAATGAATATTGCGCTATTCTTGTTGCAGTAAATTCACTGCTCCAGATGGTGCTC
TTCGCTCCCTTGGCAATCCTCTTCATTAAGGTCATTGGCCACTCGGGCAGTCAAGTTACACTCTCATATTCTACC
GCTGCCAAAAGCGTGGCGGTGTTCCTTGGCATTCCATTAGGTGCCGCAATCATTACCCGCATTGTACTTCGAAAG
ATAACTAGCCCACGTTGGTACGACCAGGTTTTCCTGAAGTGGGCTGGCCCGTGGTCCCTTATTGGGCTTCTTTTT
ACGATCCTTGTGTTGTTCGCATCTCAGGGCCGCCAGGTGGTTCATCAGATTGTATCGGTCGTTCGAGTTGCCGCT
CCGCTCATCGTTTATTTTATCGTCGTCTTCTTCATCACTCTTCTTGTGACTTACAAGCTCGGGTTCGGTTACAAG
TTGTCTGCTACTCAAAGTTTCACTGCTGCCAGCAATAATTTCGAGCTTGCTATTGCTGTCGCTGTCGCAACATTT
GGTGCCAACAGCAATCAGGCGCTTGCCGCCACTGTCGGGCCATTGATTGAGGTTCCAGTACTGCTTGGCCTTGTC
TATGTTGCCAAATTCATAGCTAAGCGAGCTGGCTGGAAAGACTGA
Gene >Pro_DTO377G3_2|g9714.t1
ATGGCAGCCCCAACAGGTCTGCACCCGACGAAGGAATCGGAATATCATAACTCAATACTGCATAGCCAGCCGCCA
ACTCCTACTGCTGAGGATGTCGAAAAGCAAGAATCGGAAGAGTCTACAGCCAAGCAATCAGCCTTCAAAGGTCTT
GGCTGGTTAGATCGTTTTCTCGCCTTGTGGATCTTCCTTGCCATGGCCGTCGGAATTATCCTAGGCAACTTTGTT
GAAAACACGGGTCCTGCTCTCCAAAAAGGGAAATTCGTGGGGGTTTCCATCCCAATCGGTATGTGCGCGTGAACT
GTGAATTTACAAGGCCTTGGCTAACCGGTGCAAGCAATTGGTCTCTTGGTCATGATGTATCCTATTCTTTGCAAA
GTACGATACGAATCTTTGCACCATGTATTCCGAGAGCGTGGGGTCTGGATTCAAATTGGGTTCAGCATCTTCATC
AATTGGATTATTGCCCCTTTACTGATGGTGAGACTAATCCCACTCCTCATGGTGATGTGTACTGATATGATCCAG
CTTGCACTAGCATGGGCTTTCCTACCGGACGAGCCAGAACTTCGGGAGGGGTTGATTCTCGTTGGATTAGCCAGA
TGCATCGCTATGGTAAGTTACCCCTTTCTTTGTTTATGTTGTACCGGATTCAGAGACTAATTGATCATGATAATA
GGTTCTTATCTGGACCGGTCTCGCTGGCGGTGATAATGAATATTGCGCTATTCTTGTTGCAGTAAATTCACTGCT
CCAGATGGTGCTCTTCGCTCCCTTGGCAATCCTCTTCATTAAGGTCATTGGCCACTCGGGCAGTCAAGTTACACT
CTCATATTCTACCGCTGCCAAAAGCGTGGCGGTGTTCCTTGGCATTCCATTAGGTGCCGCAATCATTACCCGCAT
TGTACTTCGAAAGATAACTAGCCCACGTTGGTACGACCAGGTTTTCCTGAAGTGGGCTGGCCCGTGGTCCCTTAT
TGGGCTTCTTTTTACGATCCTTGTGTTGTTCGCATCTCAGGGCCGCCAGGTGGTTCATCAGATTGTATCGGTCGT
TCGAGTTGCCGCTCCGCTCATCGTTTATTTTATCGTCGTCTTCTTCATCACTCTTCTTGTGACTTACAAGCTCGG
GTTCGGTTACAAGTTGTCTGCTACTCAAAGTTTCACTGCTGCCAGCAATAATTTCGAGCTTGCTATTGCTGTCGC
TGTCGCAACATTTGGTGCCAACAGCAATCAGGCGCTTGCCGCCACTGTCGGGCCATTGATTGAGGTTCCAGTACT
GCTTGGCCTTGTCTATGTTGCCAAATTCATAGCTAAGCGAGCTGGCTGGAAAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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