© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9685.t1 |
| Gene name | |
| Location | scaffold_61:14799..16202 |
| Strand | + |
| Gene length (bp) | 1403 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.8E-18 | 42 | 291 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.2E-13 | 244 | 416 |
| PF06779 | MFS_4 | Uncharacterised MFS-type transporter YbfB | 8.7E-08 | 76 | 411 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 77 | 99 | 22 |
| 3 | 106 | 125 | 19 |
| 4 | 129 | 151 | 22 |
| 5 | 164 | 186 | 22 |
| 6 | 196 | 218 | 22 |
| 7 | 239 | 261 | 22 |
| 8 | 274 | 296 | 22 |
| 9 | 303 | 325 | 22 |
| 10 | 329 | 351 | 22 |
| 11 | 364 | 386 | 22 |
| 12 | 396 | 418 | 22 |
| Orthofinder run ID | 2 |
| Orthogroup | 7855 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9685.t1 MSTSQLSNDRATPSSSEAPDRVELEKPTPKFPEGGLRAWMVVLGAFCVSFSTFGYMNAFGVYQDYYTEHFLSNET SSTISWIGSVQVCFLFAGSLIGGPLFDRYGAVVIHIPAVAIVFSVMMTSLCKKYYQFMLAQGVLGGIASGMLFAP VMTCVSHYFHTRRAAALGVTVSGSSIGGVIFPIALSKMLRNESLGFGWSVRIVGFIILFMVLIAMITVRERLPPR SGKVLLPRAFARAPYTLVTLGIFFMMWGLFTPFFYLPQYAQSYGMESQLASYLLSILNAASVFGRILPGMVADKI GRYNILIITGVCSGILLLCWIATTSNASIIVFAGLYGFFSGGIVSLMSPCIAQVTPSPDQIGTHLGMSMAIIALA GLTGTPICGALLERYGGYTQAAVFSGVVMFFGSVLVAAARFCLQAKPLAIV* |
| Coding | >Pro_DTO377G3_2|g9685.t1 ATGTCTACTTCACAACTATCAAATGACCGGGCTACGCCCAGTAGCTCCGAAGCGCCTGATCGCGTCGAACTTGAA AAGCCAACCCCAAAATTCCCAGAGGGCGGCCTCCGAGCTTGGATGGTGGTTTTAGGTGCATTTTGTGTGTCTTTC TCGACTTTCGGATACATGAACGCTTTCGGAGTCTATCAGGATTACTACACAGAGCACTTTCTCTCCAACGAGACT TCATCCACTATTTCTTGGATTGGATCTGTTCAGGTCTGCTTTCTCTTCGCTGGTAGCCTTATCGGTGGGCCATTG TTCGACCGGTACGGCGCTGTGGTCATTCATATACCTGCGGTCGCTATCGTATTTTCAGTGATGATGACATCTCTG TGCAAGAAGTATTATCAATTCATGCTTGCTCAAGGCGTCTTGGGTGGGATTGCTTCCGGCATGCTATTTGCCCCC GTCATGACATGTGTGAGCCACTATTTCCATACTCGACGTGCTGCAGCCCTTGGTGTGACAGTCTCTGGGTCTTCC ATCGGGGGAGTTATATTTCCTATTGCCTTGAGCAAGATGCTGAGAAACGAATCCTTGGGGTTCGGATGGTCCGTC CGAATTGTGGGGTTCATCATCTTGTTCATGGTATTGATAGCGATGATAACTGTAAGAGAGCGACTTCCTCCTCGT AGCGGCAAAGTTCTCTTGCCGAGAGCTTTTGCTCGCGCTCCTTACACCCTCGTCACACTCGGTATCTTCTTCATG ATGTGGGGACTTTTCACTCCATTCTTCTATCTTCCGCAATATGCCCAGTCTTATGGCATGGAATCACAGCTTGCG TCCTACCTTTTATCCATCCTCAATGCTGCCTCCGTTTTCGGCAGAATATTACCGGGCATGGTTGCGGATAAGATT GGTCGCTACAATATCTTGATCATCACCGGTGTCTGCTCGGGCATTCTACTTCTGTGCTGGATCGCGACAACTTCA AATGCGTCAATCATTGTCTTTGCGGGGCTCTATGGTTTCTTTTCGGGCGGGATTGTGTCGCTGATGTCTCCTTGT ATTGCTCAAGTCACGCCGAGTCCGGACCAGATTGGTACTCATCTCGGCATGTCAATGGCCATTATTGCCCTTGCT GGTCTGACCGGGACCCCGATATGCGGTGCATTGCTAGAAAGATACGGAGGATACACACAGGCCGCAGTTTTTAGT GGTGTCGTGATGTTTTTCGGATCTGTGCTTGTCGCCGCGGCGAGGTTTTGTCTGCAGGCAAAGCCCTTGGCAATT GTGTGA |
| Transcript | >Pro_DTO377G3_2|g9685.t1 ATGTCTACTTCACAACTATCAAATGACCGGGCTACGCCCAGTAGCTCCGAAGCGCCTGATCGCGTCGAACTTGAA AAGCCAACCCCAAAATTCCCAGAGGGCGGCCTCCGAGCTTGGATGGTGGTTTTAGGTGCATTTTGTGTGTCTTTC TCGACTTTCGGATACATGAACGCTTTCGGAGTCTATCAGGATTACTACACAGAGCACTTTCTCTCCAACGAGACT TCATCCACTATTTCTTGGATTGGATCTGTTCAGGTCTGCTTTCTCTTCGCTGGTAGCCTTATCGGTGGGCCATTG TTCGACCGGTACGGCGCTGTGGTCATTCATATACCTGCGGTCGCTATCGTATTTTCAGTGATGATGACATCTCTG TGCAAGAAGTATTATCAATTCATGCTTGCTCAAGGCGTCTTGGGTGGGATTGCTTCCGGCATGCTATTTGCCCCC GTCATGACATGTGTGAGCCACTATTTCCATACTCGACGTGCTGCAGCCCTTGGTGTGACAGTCTCTGGGTCTTCC ATCGGGGGAGTTATATTTCCTATTGCCTTGAGCAAGATGCTGAGAAACGAATCCTTGGGGTTCGGATGGTCCGTC CGAATTGTGGGGTTCATCATCTTGTTCATGGTATTGATAGCGATGATAACTGTAAGAGAGCGACTTCCTCCTCGT AGCGGCAAAGTTCTCTTGCCGAGAGCTTTTGCTCGCGCTCCTTACACCCTCGTCACACTCGGTATCTTCTTCATG ATGTGGGGACTTTTCACTCCATTCTTCTATCTTCCGCAATATGCCCAGTCTTATGGCATGGAATCACAGCTTGCG TCCTACCTTTTATCCATCCTCAATGCTGCCTCCGTTTTCGGCAGAATATTACCGGGCATGGTTGCGGATAAGATT GGTCGCTACAATATCTTGATCATCACCGGTGTCTGCTCGGGCATTCTACTTCTGTGCTGGATCGCGACAACTTCA AATGCGTCAATCATTGTCTTTGCGGGGCTCTATGGTTTCTTTTCGGGCGGGATTGTGTCGCTGATGTCTCCTTGT ATTGCTCAAGTCACGCCGAGTCCGGACCAGATTGGTACTCATCTCGGCATGTCAATGGCCATTATTGCCCTTGCT GGTCTGACCGGGACCCCGATATGCGGTGCATTGCTAGAAAGATACGGAGGATACACACAGGCCGCAGTTTTTAGT GGTGTCGTGATGTTTTTCGGATCTGTGCTTGTCGCCGCGGCGAGGTTTTGTCTGCAGGCAAAGCCCTTGGCAATT GTGTGA |
| Gene | >Pro_DTO377G3_2|g9685.t1 ATGTCTACTTCACAACTATCAAATGACCGGGCTACGCCCAGTAGCTCCGAAGCGCCTGATCGCGTCGAACTTGAA AAGCCAACCCCAAAATTCCCAGAGGGCGGCCTCCGAGCTTGGATGGTGGTTTTAGGTGCATTTTGTGTGTCTTTC TCGACTTTCGGATACATGAACGCTTTCGGGTAAGCTCTATACTCCGCAACTCTATGGTATGATAACGAAGTCTAA CATATGAACGACACAGAGTCTATCAGGATTACTACACAGAGCACTTTCTCTCCAACGAGACTTCATCCACTATTT CTTGGATTGGATCTGTTCAGGTCTGCTTTCTCTTCGCTGGTAGCCTTATCGGTGGGCCATTGTTCGACCGGTACG GCGCTGTGGTAAGGACTTGTCTTCCTATCAGCAACAGCATCATTGACTAACTATACTCTCCATATTAGGTCATTC ATATACCTGCGGTCGCTATCGTATTTTCAGTGATGATGACATCTCTGTGCAAGAAGTATTATCAATTCATGCTTG CTCAAGGCGTCTTGGGTGGGATTGCTTCCGGCATGCTATTTGCCCCCGTCATGACATGTGTGAGCCACTATTTCC ATACTCGACGTGCTGCAGCCCTTGGTGTGACAGTCTCTGGGTCTTCCATCGGGGGAGTTATATTTCCTATTGCCT TGAGCAAGATGCTGAGAAACGAATCCTTGGGGTTCGGATGGTCCGTCCGAATTGTGGGGTTCATCATCTTGTTCA TGGTATTGATAGCGATGATAACTGTAAGAGAGCGACTTCCTCCTCGTAGCGGCAAAGTTCTCTTGCCGAGAGCTT TTGCTCGCGCTCCTTACACCCTCGTCACACTCGGTATCTTCTTCATGATGTGGGGACTTTTCACTCCATTCTTCT ATCTTCCGCAATATGCCCAGTCTTATGGCATGGAATCACAGCTTGCGTCCTACCTTTTATCCATCCTCAATGCTG CCTCCGTTTTCGGCAGAATATTACCGGGCATGGTTGCGGATAAGATTGGTCGCTACAATATCTTGATCATCACCG GTGTCTGCTCGGGCATTCTACTTCTGTGCTGGATCGCGACAACTTCAAATGCGTCAATCATTGTCTTTGCGGGGC TCTATGGTTTCTTTTCGGGCGGGATTGTGTCGCTGATGTCTCCTTGTATTGCTCAAGTCACGCCGAGTCCGGACC AGATTGGTACTCATCTCGGCATGTCAATGGCCATTATTGCCCTTGCTGGTCTGACCGGGACCCCGATATGCGGTG CATTGCTAGAAAGATACGGAGGATACACACAGGCCGCAGTTTTTAGTGGTGTCGTGATGTTTTTCGGATCTGTGC TTGTCGCCGCGGCGAGGTTTTGTCTGCAGGCAAAGCCCTTGGCAATTGTGTGA |