Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g968.t1
Gene name
Locationscaffold_01:2563218..2566054
Strand+
Gene length (bp)2836
Transcript length (bp)2664
Coding sequence length (bp)2664
Protein length (aa) 888

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17681 GCP_N_terminal Gamma tubulin complex component N-terminal 4.3E-63 174 512
PF04130 GCP_C_terminal Gamma tubulin complex component C-terminal 1.3E-58 515 874

GO

GO Term Description Terminal node
GO:0043015 gamma-tubulin binding Yes
GO:0005515 protein binding No
GO:0008092 cytoskeletal protein binding No
GO:0005488 binding No
GO:0015631 tubulin binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 9.87 4.97 14.77
5d_25C Five days - 25 degrees Celsius 9.51 4.74 14.29
7d_25C Seven days - 25 degrees Celsius 10.23 5.19 15.26
10d_25C Ten days - 25 degrees Celsius 10.67 5.47 15.87
7d_15C Seven days - 15 degrees Celsius 9.73 4.87 14.59
7d_30C Seven days - 30 degrees Celsius 13.26 7.16 19.36

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.934727 no
3d_25C 7d_25C 0.934532 no
3d_25C 7d_15C 0.973797 no
3d_25C 7d_30C 0.316065 no
3d_25C 10d_25C 0.847283 no
5d_25C 7d_25C 0.858498 no
5d_25C 7d_15C 0.959911 no
5d_25C 7d_30C 0.246414 no
5d_25C 10d_25C 0.760888 no
7d_25C 7d_15C 0.904851 no
7d_25C 7d_30C 0.374648 no
7d_25C 10d_25C 0.919226 no
7d_15C 7d_30C 0.285400 no
7d_15C 10d_25C 0.810726 no
7d_30C 10d_25C 0.482673 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g968.t1
MSANDRAAYMNASRPRAVSNRVDSETRGASPLQIENKDPLRRSSSNQKHRASRDQKSMADKRSERMVITSRERAV
RRNPVNPVKESINAASRGDWDKTRPRKPVQLDDGNSSFRTGEKDLADSPWNPQASLIPHSTAPLACRVSVPPLAS
TAPQALHPRPLRELSPDAQEAAILEDLLFVFMGFEGQYVHYASSYDPSIEKDRLTGPIFQIAPGLDPTLRDLIQS
MLKMATHYSAMEAFVEIQSRAECGAVSHSLCASIRKLLKDYLILIAQLEGQLLNNPTFTLHLLHLYTMPTSQCLS
QLYSMGQELLLKNGLLDEELEESTDDFDEDVDNILEQLKEGGDLVPGSMARKKMCKGGNILGLLTGRLASFSGDP
ITKTLLQTLLRDASRPYMAMLNEWLHHGGIRDPHAEFLVKEQKWIKREKLEEDYTDEYWEKRYTIRENEVPPQLK
SVQDKVLLAGKYLNVVRECGGVDVSKEVKDVPKTLDDPRFLDNVNSAYTYANASLLNLLVTKNSLTTRFRSLKHY
FFLDRSDFFSYFLELGASELRKPARAVNEGKLQSLLDIVLRQPGSVAALDPFKEDVKVRMNKIGLTKWLMQVVNV
SGVNQEGAEAEKQQGSAVHSADEDKDILGFDALELDYSVPFPLSLVISRKTVLRYQLIFRHLLSLRHLETLLVTS
WADQNKTISWRHKSSDRRLEIWKRRAWNLRAKMLVFVQQLLYFCTAEVIEPNWVGLMDRVNSVDADASEVEENYM
KQVNRTVDELMQDHVDFLDTCLKECMLTQAKLLKIHSKLVTCCTMFASWTAASLSRALASADPDLAGGKVPGADA
RGYDPTRIGKLEDTLKRYEDHFSRHLRILMDSLNYFAATESVVLLKLAHSLTSISREESKED*
Coding >Pro_DTO377G3_2|g968.t1
ATGTCTGCCAATGACCGCGCCGCGTATATGAACGCTTCACGACCCCGCGCGGTCTCCAATCGCGTCGATTCCGAA
ACTCGCGGAGCATCGCCGTTACAGATCGAGAATAAGGATCCCTTGCGCCGCAGCAGCTCAAATCAAAAACACAGA
GCATCCCGAGATCAGAAGAGCATGGCCGATAAGCGCTCAGAACGCATGGTAATCACATCACGGGAAAGGGCAGTG
CGAAGGAACCCTGTGAACCCTGTTAAGGAATCTATCAATGCGGCTAGCAGGGGCGATTGGGATAAAACTCGGCCC
AGGAAGCCTGTCCAACTTGATGACGGGAATTCCAGTTTCCGAACTGGGGAGAAAGACCTGGCTGATTCACCATGG
AATCCCCAAGCATCATTGATTCCTCACTCGACAGCTCCCCTCGCATGTCGTGTATCAGTTCCTCCTCTAGCTTCG
ACGGCTCCGCAGGCCCTTCATCCTCGGCCACTTCGAGAGCTCTCACCCGATGCCCAGGAGGCGGCGATCTTGGAA
GACTTGTTGTTCGTGTTCATGGGATTCGAAGGTCAATATGTTCACTACGCTAGCTCATACGACCCATCAATCGAG
AAAGACCGCCTCACGGGCCCGATCTTCCAGATAGCCCCAGGCCTGGACCCGACCCTCCGTGATCTCATCCAGTCC
ATGTTGAAAATGGCTACTCACTACAGTGCCATGGAGGCATTTGTGGAAATTCAAAGTCGCGCTGAGTGTGGTGCT
GTCAGTCACTCACTATGCGCATCTATTCGAAAGCTCCTCAAAGATTACCTGATCCTTATCGCCCAGCTCGAAGGC
CAGCTGCTGAACAATCCTACATTTACCTTACACCTTCTCCATCTCTACACAATGCCTACCAGTCAATGTTTATCT
CAATTATATTCGATGGGCCAGGAACTGTTGCTCAAAAATGGTCTTCTAGATGAGGAGCTCGAGGAGTCGACTGAT
GACTTCGATGAGGATGTTGACAATATACTTGAACAACTCAAAGAAGGGGGGGACTTAGTGCCAGGTTCTATGGCC
CGCAAGAAAATGTGCAAAGGAGGCAATATTCTCGGACTCCTAACAGGGCGTCTGGCTTCATTCTCGGGTGATCCG
ATCACTAAAACCTTGCTTCAGACCTTACTGCGTGACGCCAGTCGGCCTTACATGGCTATGCTAAACGAATGGTTG
CACCATGGCGGTATTAGAGATCCCCATGCCGAGTTCTTGGTCAAGGAACAAAAATGGATCAAACGCGAGAAACTC
GAGGAAGACTACACGGATGAATATTGGGAGAAACGCTACACGATTCGCGAGAACGAGGTTCCTCCTCAGCTGAAG
AGCGTGCAGGATAAAGTTCTGCTGGCTGGAAAGTATCTCAACGTGGTGCGTGAATGTGGTGGTGTCGACGTCAGC
AAAGAGGTCAAAGATGTACCGAAGACGCTCGACGATCCACGCTTCTTGGACAACGTAAATTCTGCCTACACCTAT
GCCAATGCTTCCCTGTTAAATCTTCTTGTCACAAAAAACTCCCTCACTACTCGATTCCGCTCCCTGAAACATTAC
TTCTTCCTCGATCGCTCTGATTTTTTTTCCTACTTCCTCGAGCTTGGTGCTTCCGAGCTACGAAAACCGGCACGT
GCCGTCAACGAAGGGAAGCTGCAGTCACTGTTGGATATTGTCCTTCGACAGCCTGGCAGCGTTGCAGCACTGGAC
CCGTTCAAGGAGGATGTCAAGGTGCGGATGAACAAGATCGGCCTCACGAAATGGTTGATGCAGGTTGTGAATGTT
TCAGGCGTCAACCAAGAGGGCGCGGAAGCGGAGAAGCAACAAGGTTCTGCTGTCCATTCCGCTGATGAGGACAAA
GATATTCTTGGATTCGATGCGCTTGAGCTGGACTATTCAGTTCCATTCCCCCTATCACTGGTAATTAGCCGTAAA
ACCGTTCTGCGGTACCAACTTATTTTCCGCCATCTTCTCTCGCTGCGCCATCTCGAGACGTTGTTGGTCACGTCC
TGGGCAGACCAGAACAAAACCATCAGCTGGCGGCATAAATCCTCCGATCGACGGCTTGAAATATGGAAACGGCGG
GCGTGGAACTTGCGCGCGAAGATGTTGGTGTTTGTTCAGCAGCTTTTGTACTTTTGCACGGCTGAGGTCATTGAG
CCCAATTGGGTGGGTCTGATGGATCGTGTCAACAGCGTTGACGCCGACGCGTCGGAGGTGGAGGAAAATTATATG
AAGCAGGTCAATCGAACGGTTGATGAGCTGATGCAAGATCATGTGGATTTCTTGGATACCTGTTTGAAGGAGTGC
ATGCTCACACAGGCTAAACTGTTGAAGATCCATTCGAAACTGGTGACTTGCTGCACCATGTTTGCTTCCTGGACT
GCGGCATCACTTTCACGCGCCTTGGCTTCAGCCGATCCTGACTTGGCTGGAGGAAAAGTCCCTGGCGCTGATGCC
AGAGGATATGATCCAACGCGGATTGGAAAACTCGAGGACACACTGAAACGATACGAGGACCATTTCTCGCGCCAT
CTCCGCATTTTGATGGACAGCTTGAACTACTTCGCCGCAACGGAGAGTGTGGTGCTCCTGAAGCTTGCACATTCT
TTGACCTCTATTAGCCGAGAGGAGAGTAAAGAGGATTGA
Transcript >Pro_DTO377G3_2|g968.t1
ATGTCTGCCAATGACCGCGCCGCGTATATGAACGCTTCACGACCCCGCGCGGTCTCCAATCGCGTCGATTCCGAA
ACTCGCGGAGCATCGCCGTTACAGATCGAGAATAAGGATCCCTTGCGCCGCAGCAGCTCAAATCAAAAACACAGA
GCATCCCGAGATCAGAAGAGCATGGCCGATAAGCGCTCAGAACGCATGGTAATCACATCACGGGAAAGGGCAGTG
CGAAGGAACCCTGTGAACCCTGTTAAGGAATCTATCAATGCGGCTAGCAGGGGCGATTGGGATAAAACTCGGCCC
AGGAAGCCTGTCCAACTTGATGACGGGAATTCCAGTTTCCGAACTGGGGAGAAAGACCTGGCTGATTCACCATGG
AATCCCCAAGCATCATTGATTCCTCACTCGACAGCTCCCCTCGCATGTCGTGTATCAGTTCCTCCTCTAGCTTCG
ACGGCTCCGCAGGCCCTTCATCCTCGGCCACTTCGAGAGCTCTCACCCGATGCCCAGGAGGCGGCGATCTTGGAA
GACTTGTTGTTCGTGTTCATGGGATTCGAAGGTCAATATGTTCACTACGCTAGCTCATACGACCCATCAATCGAG
AAAGACCGCCTCACGGGCCCGATCTTCCAGATAGCCCCAGGCCTGGACCCGACCCTCCGTGATCTCATCCAGTCC
ATGTTGAAAATGGCTACTCACTACAGTGCCATGGAGGCATTTGTGGAAATTCAAAGTCGCGCTGAGTGTGGTGCT
GTCAGTCACTCACTATGCGCATCTATTCGAAAGCTCCTCAAAGATTACCTGATCCTTATCGCCCAGCTCGAAGGC
CAGCTGCTGAACAATCCTACATTTACCTTACACCTTCTCCATCTCTACACAATGCCTACCAGTCAATGTTTATCT
CAATTATATTCGATGGGCCAGGAACTGTTGCTCAAAAATGGTCTTCTAGATGAGGAGCTCGAGGAGTCGACTGAT
GACTTCGATGAGGATGTTGACAATATACTTGAACAACTCAAAGAAGGGGGGGACTTAGTGCCAGGTTCTATGGCC
CGCAAGAAAATGTGCAAAGGAGGCAATATTCTCGGACTCCTAACAGGGCGTCTGGCTTCATTCTCGGGTGATCCG
ATCACTAAAACCTTGCTTCAGACCTTACTGCGTGACGCCAGTCGGCCTTACATGGCTATGCTAAACGAATGGTTG
CACCATGGCGGTATTAGAGATCCCCATGCCGAGTTCTTGGTCAAGGAACAAAAATGGATCAAACGCGAGAAACTC
GAGGAAGACTACACGGATGAATATTGGGAGAAACGCTACACGATTCGCGAGAACGAGGTTCCTCCTCAGCTGAAG
AGCGTGCAGGATAAAGTTCTGCTGGCTGGAAAGTATCTCAACGTGGTGCGTGAATGTGGTGGTGTCGACGTCAGC
AAAGAGGTCAAAGATGTACCGAAGACGCTCGACGATCCACGCTTCTTGGACAACGTAAATTCTGCCTACACCTAT
GCCAATGCTTCCCTGTTAAATCTTCTTGTCACAAAAAACTCCCTCACTACTCGATTCCGCTCCCTGAAACATTAC
TTCTTCCTCGATCGCTCTGATTTTTTTTCCTACTTCCTCGAGCTTGGTGCTTCCGAGCTACGAAAACCGGCACGT
GCCGTCAACGAAGGGAAGCTGCAGTCACTGTTGGATATTGTCCTTCGACAGCCTGGCAGCGTTGCAGCACTGGAC
CCGTTCAAGGAGGATGTCAAGGTGCGGATGAACAAGATCGGCCTCACGAAATGGTTGATGCAGGTTGTGAATGTT
TCAGGCGTCAACCAAGAGGGCGCGGAAGCGGAGAAGCAACAAGGTTCTGCTGTCCATTCCGCTGATGAGGACAAA
GATATTCTTGGATTCGATGCGCTTGAGCTGGACTATTCAGTTCCATTCCCCCTATCACTGGTAATTAGCCGTAAA
ACCGTTCTGCGGTACCAACTTATTTTCCGCCATCTTCTCTCGCTGCGCCATCTCGAGACGTTGTTGGTCACGTCC
TGGGCAGACCAGAACAAAACCATCAGCTGGCGGCATAAATCCTCCGATCGACGGCTTGAAATATGGAAACGGCGG
GCGTGGAACTTGCGCGCGAAGATGTTGGTGTTTGTTCAGCAGCTTTTGTACTTTTGCACGGCTGAGGTCATTGAG
CCCAATTGGGTGGGTCTGATGGATCGTGTCAACAGCGTTGACGCCGACGCGTCGGAGGTGGAGGAAAATTATATG
AAGCAGGTCAATCGAACGGTTGATGAGCTGATGCAAGATCATGTGGATTTCTTGGATACCTGTTTGAAGGAGTGC
ATGCTCACACAGGCTAAACTGTTGAAGATCCATTCGAAACTGGTGACTTGCTGCACCATGTTTGCTTCCTGGACT
GCGGCATCACTTTCACGCGCCTTGGCTTCAGCCGATCCTGACTTGGCTGGAGGAAAAGTCCCTGGCGCTGATGCC
AGAGGATATGATCCAACGCGGATTGGAAAACTCGAGGACACACTGAAACGATACGAGGACCATTTCTCGCGCCAT
CTCCGCATTTTGATGGACAGCTTGAACTACTTCGCCGCAACGGAGAGTGTGGTGCTCCTGAAGCTTGCACATTCT
TTGACCTCTATTAGCCGAGAGGAGAGTAAAGAGGATTGA
Gene >Pro_DTO377G3_2|g968.t1
ATGTCTGCCAATGACCGCGCCGCGTATATGAACGCTTCACGACCCCGCGCGGTCTCCAATCGCGTCGATTCCGAA
ACTCGCGGAGCATCGCCGTTACAGATCGAGAATAAGGATCCCTTGCGCCGCAGCAGCTCAAATCAAAAACACAGA
GCATCCCGAGATCAGAAGAGCATGGCCGATAAGCGCTCAGAACGCATGGTAATCACATCACGGGAAAGGGCAGTG
CGAAGGAACCCTGTGAACCCTGTTAAGGAATCTATCAATGCGGCTAGCAGGGGCGATTGGGATAAAACTCGGCCC
AGGAAGCCTGTCCAACTTGATGACGGGAATTCCAGTTTCCGAACTGGGGAGAAAGACCTGGCTGATTGTGAGTGC
TGCGTCGCAGTTTCTCGTGGAGTGCAATGGATTTGCTGACCATGATTTTTCTCTTTACAGCACCATGGAATCCCC
AAGCATCATTGATTCCTCACTCGACAGCTCCCCTCGCATGTCGTGTATCAGTTCCTCCTCTAGCTTCGACGGCTC
CGCAGGCCCTTCATCCTCGGCCACTTCGAGAGCTCTCACCCGATGCCCAGGAGGCGGCGATCTTGGAAGACTTGT
TGTTCGTGTTCATGGGATTCGAAGGTCAATATGTTCACTACGCTAGCTCATACGACCCATCAATCGAGAAAGACC
GCCTCACGGGCCCGATCTTCCAGATAGCCCCAGGCCTGGACCCGACCCTCCGTGATCTCATCCAGTCCATGTTGA
AAATGGCTACTCACTACAGTGCCATGGAGGCATTTGTGGAAATTCAAAGTCGCGCTGAGTGTGGTGCTGTCAGTC
ACTCACTATGCGCATCTATTCGAAAGCTCCTCAAAGATTACCTGATCCTTATCGCCCAGCTCGAAGGCCAGCTGC
TGAACAATCCTACATTTACCTTACACCTTCTCCATCTCTACACAATGCCTACCAGTCAATGTTTATCTCAATTAT
ATTCGATGGGCCAGGAACTGTTGCTCAAAAATGGTCTTCTAGATGAGGAGCTCGAGGAGTCGACTGATGACTTCG
ATGAGGATGTTGACAATATACTTGAACAACTCAAAGAAGGGGGGGACTTAGTGCCAGGTTCTATGGCCCGCAAGA
AAATGTGCAAAGGAGGCAATATTCTCGGACTCCTAACAGGGCGTCTGGCTTCATTCTCGGGTGATCCGATCACTA
AAACCTTGCTTCAGACCTTACTGCGTGACGCCAGTCGGCCTTACATGGCTATGCTAAACGAATGGTTGCACCATG
GCGGTATTAGAGATCCCCATGCCGAGTTCTTGGTCAAGGAACAAAAATGGATCAAACGCGAGAAACTCGAGGAAG
ACTACACGGATGAATATTGGGAGAAACGCTACACGATTCGCGAGAACGAGGTTCCTCCTCAGCTGAAGAGCGTGC
AGGATAAAGTTCTGCTGGCTGGAAAGTATCTCAACGTGGTGCGTGAATGTGGTGGTGTCGACGTCAGCAAAGAGG
TCAAAGATGTACCGAAGACGCTCGACGATCCACGCTTCTTGGACAACGTAAATTCTGCCTACACCTATGCCAATG
CTTCCCTGTTAAATCTTCTTGTCACAAAAAACTCCCTCACTACTCGATTCCGCTCCCTGAAACATTACTTCTTCC
TCGATCGCTCTGATTTTTTTTCCTACTTCCTCGAGCTTGGTGCTTCCGAGCTACGAAAACCGGCACGTGCCGTCA
ACGAAGGGAAGCTGCAGTCACTGTTGGATATTGTCCTTCGACAGCCTGGCAGCGTTGCAGCACTGGACCCGTTCA
AGGAGGATGTCAAGGTGCGGATGAACAAGATCGGCCTCACGAAATGGTTGATGCAGGTTGTGAATGTTTCAGGCG
TCAACCAAGAGGGCGCGGAAGCGGAGAAGCAACAAGGTTCTGCTGTCCATTCCGCTGATGAGGACAAAGATATTC
TTGGATTCGATGCGCTTGAGCTGGACTATTCAGTTCCATTCCCCCTATCACTGGTAATTAGCCGTAAAACCGTTC
TGCGGTACCAACTTATTTTCCGCCATCTTCTCTCGCTGCGCCATCTCGAGACGTTGTTGGTCACGTCCTGGGCAG
ACCAGAACAAAACCATCAGCTGGCGGCATAAATCCTCCGATCGACGGCTTGAAATATGGAAACGGCGGGCGTGGA
ACTTGCGCGCGAAGATGTTGGTGTTTGTTCAGCAGCTTTTGTACTTTTGCACGGCTGAGGTCATTGAGCCCAATT
GGGTGGGTCTGATGGATCGTGTCAACAGCGTTGACGCCGACGCGTCGGAGGTGGAGGAAAATTATATGAAGCAGG
TCAATCGAACGGTTGATGAGCTGATGCAAGATCATGTGGATTTCTTGGATACCTGTTTGAAGGAGTGCATGCTCA
CACAGGCTAAACTGTTGAAGGTACGTTTATCCATGCAGGCGGTGGTATTCATACTAATAGCTATATAGATCCATT
CGAAACTGGTGACTTGCTGCACCATGTTTGCTTCCTGGACTGCGGCATCACTTTCACGCGCCTTGGCTTCAGCCG
ATCCTGACTTGGCTGGAGGAAAAGTCCCTGGCGCTGATGCCAGAGGATATGATCCAACGCGGATTGGAAAACTCG
AGGACACACTGAAACGATACGAGGACCATTTCTCGCGCCATCTCCGCATTTTGATGGACAGGTGAGTTACACCCT
TAAGAAATACATCTGGTTATGTGTTCTAACACGACTATACAGCTTGAACTACTTCGCCGCAACGGAGAGTGTGGT
GCTCCTGAAGCTTGCACATTCTTTGACCTCTATTAGCCGAGAGGAGAGTAAAGAGGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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