© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g9650.t1 |
| Gene name | |
| Location | scaffold_55:29043..30902 |
| Strand | - |
| Gene length (bp) | 1859 |
| Transcript length (bp) | 1806 |
| Coding sequence length (bp) | 1806 |
| Protein length (aa) | 602 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 9.2E-62 | 4 | 315 |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 8.9E-32 | 454 | 594 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.0E-04 | 8 | 37 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| AA3_2 | 4.3E-177 | 3 | 600 |
| Orthofinder run ID | 2 |
| Orthogroup | 8787 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9650.t1 MDDYDYIIIGAGIGGLVLANRLSEDPSVSVLLIEAGANRMGDPRIDTPGLMATMYGNPDFDWDYMSIPQVHVKNR QIGQPRGRVVGGSSALNFSAIVYPAASNFDAWKALGNDGWSAKDMAPYLRKFHSYVAPSEATAELLGTSRYMQLE NQGSNGPLPVTYPDIYGPFHKAWNETFAQLGWETDADPIDGHKLGAFTSPISVDVKTGKRGYAAAYYSPEVAARP NLRLLAETMVERIILSQQEGDVVATGVQVKTQDSSYEIKAKKEVIVCAGSLNSPQVLELSGIGGADLLQTHGIPV IIDNPAVGENLQDHSIASVNFEIADGQISGDIMRDPNVVQAVMKLYEETRGGPLTGIPLNMAYLPLVDGTGVVPK EELDALLSKYLDNDSTPASLQAQYSQIRSILLDRNENSTHYLFLPAQLNGKPDQTTITDVLAKVHPENYISIMVL HNHPFSRGSVHIASGKSEDKPTYDPNLLSHPLDLEIMARQVQYMGRVSETAPLSGLLKSGKRMPQSAIDLSDLDH VKDVVQDLLFTCFHPVGSCAMLPRELGGVVDSELRVYGTKNVRVVDASIFPLEIAGNIQATVYAVAEHAADLIKS Q* |
| Coding | >Pro_DTO377G3_2|g9650.t1 ATGGATGACTACGACTATATCATCATCGGCGCTGGAATCGGCGGTCTTGTTCTGGCAAACCGTCTAAGCGAGGAT CCCTCCGTCAGTGTCCTGCTCATTGAAGCTGGCGCCAATCGGATGGGAGATCCGCGTATTGATACGCCTGGATTG ATGGCTACCATGTATGGTAACCCGGACTTTGACTGGGATTACATGAGTATTCCGCAGGTCCATGTGAAAAACCGA CAGATCGGTCAGCCCCGCGGTCGGGTCGTCGGCGGCTCTTCCGCATTGAACTTTTCCGCTATTGTGTACCCTGCC GCGTCGAATTTTGACGCGTGGAAGGCGCTAGGAAATGACGGTTGGAGTGCCAAGGATATGGCCCCCTATCTTCGA AAGTTCCACTCGTATGTCGCCCCTAGCGAGGCCACTGCCGAACTACTCGGCACAAGCCGGTACATGCAACTCGAG AACCAAGGATCGAATGGTCCTCTTCCTGTAACTTACCCAGATATATATGGGCCATTCCACAAGGCCTGGAATGAG ACATTTGCGCAATTGGGCTGGGAAACCGATGCCGACCCTATTGATGGCCACAAACTCGGCGCTTTTACTTCCCCG ATAAGCGTCGATGTCAAGACGGGTAAAAGAGGGTATGCAGCGGCATACTACTCCCCCGAGGTCGCGGCGCGGCCA AACCTACGGCTTCTTGCAGAGACAATGGTCGAGCGAATTATCCTCTCCCAACAGGAGGGAGATGTCGTTGCCACT GGTGTGCAGGTCAAGACTCAGGACAGTTCATACGAGATCAAGGCAAAGAAGGAAGTGATCGTCTGCGCAGGCAGC CTGAATTCCCCTCAGGTGCTCGAGCTCTCGGGTATCGGCGGTGCAGATCTTCTCCAGACCCACGGCATCCCGGTG ATCATCGACAACCCCGCCGTGGGCGAGAATCTTCAAGATCACAGTATCGCGAGCGTCAACTTTGAGATCGCCGAT GGCCAGATCTCGGGCGATATCATGCGTGATCCCAACGTCGTACAGGCAGTCATGAAGCTCTACGAGGAGACGCGC GGAGGCCCGCTAACCGGCATACCTCTCAACATGGCCTATCTCCCGCTAGTAGATGGAACCGGCGTCGTGCCGAAA GAAGAACTCGACGCCCTGCTCTCGAAATACCTCGACAACGACAGCACACCAGCTAGCCTGCAAGCGCAATATTCT CAAATCCGCAGTATACTCCTCGACCGGAACGAGAACTCCACGCACTACCTCTTCCTCCCTGCCCAGCTCAACGGG AAACCAGACCAAACAACCATCACCGACGTGCTGGCCAAAGTTCACCCGGAGAACTACATTTCCATCATGGTGCTG CACAACCACCCGTTCTCACGCGGCTCGGTCCACATTGCCTCCGGCAAGAGTGAAGATAAGCCCACCTACGACCCA AACCTGCTCTCTCACCCGCTTGATCTGGAGATCATGGCCCGGCAGGTGCAGTACATGGGGCGCGTTTCCGAGACT GCTCCACTCTCTGGTCTGCTCAAATCCGGCAAGCGCATGCCTCAGAGTGCCATCGATTTGAGTGATCTGGACCAT GTGAAGGATGTCGTTCAGGATCTCTTGTTCACGTGTTTCCATCCTGTGGGCTCGTGTGCCATGCTGCCGAGGGAG CTTGGCGGCGTTGTTGATTCTGAGCTCAGGGTTTATGGCACCAAGAACGTGAGGGTTGTTGATGCCAGTATTTTC CCGCTTGAGATCGCTGGAAATATCCAGGCTACTGTTTATGCGGTTGCGGAGCACGCAGCGGATTTGATCAAATCC CAGTAG |
| Transcript | >Pro_DTO377G3_2|g9650.t1 ATGGATGACTACGACTATATCATCATCGGCGCTGGAATCGGCGGTCTTGTTCTGGCAAACCGTCTAAGCGAGGAT CCCTCCGTCAGTGTCCTGCTCATTGAAGCTGGCGCCAATCGGATGGGAGATCCGCGTATTGATACGCCTGGATTG ATGGCTACCATGTATGGTAACCCGGACTTTGACTGGGATTACATGAGTATTCCGCAGGTCCATGTGAAAAACCGA CAGATCGGTCAGCCCCGCGGTCGGGTCGTCGGCGGCTCTTCCGCATTGAACTTTTCCGCTATTGTGTACCCTGCC GCGTCGAATTTTGACGCGTGGAAGGCGCTAGGAAATGACGGTTGGAGTGCCAAGGATATGGCCCCCTATCTTCGA AAGTTCCACTCGTATGTCGCCCCTAGCGAGGCCACTGCCGAACTACTCGGCACAAGCCGGTACATGCAACTCGAG AACCAAGGATCGAATGGTCCTCTTCCTGTAACTTACCCAGATATATATGGGCCATTCCACAAGGCCTGGAATGAG ACATTTGCGCAATTGGGCTGGGAAACCGATGCCGACCCTATTGATGGCCACAAACTCGGCGCTTTTACTTCCCCG ATAAGCGTCGATGTCAAGACGGGTAAAAGAGGGTATGCAGCGGCATACTACTCCCCCGAGGTCGCGGCGCGGCCA AACCTACGGCTTCTTGCAGAGACAATGGTCGAGCGAATTATCCTCTCCCAACAGGAGGGAGATGTCGTTGCCACT GGTGTGCAGGTCAAGACTCAGGACAGTTCATACGAGATCAAGGCAAAGAAGGAAGTGATCGTCTGCGCAGGCAGC CTGAATTCCCCTCAGGTGCTCGAGCTCTCGGGTATCGGCGGTGCAGATCTTCTCCAGACCCACGGCATCCCGGTG ATCATCGACAACCCCGCCGTGGGCGAGAATCTTCAAGATCACAGTATCGCGAGCGTCAACTTTGAGATCGCCGAT GGCCAGATCTCGGGCGATATCATGCGTGATCCCAACGTCGTACAGGCAGTCATGAAGCTCTACGAGGAGACGCGC GGAGGCCCGCTAACCGGCATACCTCTCAACATGGCCTATCTCCCGCTAGTAGATGGAACCGGCGTCGTGCCGAAA GAAGAACTCGACGCCCTGCTCTCGAAATACCTCGACAACGACAGCACACCAGCTAGCCTGCAAGCGCAATATTCT CAAATCCGCAGTATACTCCTCGACCGGAACGAGAACTCCACGCACTACCTCTTCCTCCCTGCCCAGCTCAACGGG AAACCAGACCAAACAACCATCACCGACGTGCTGGCCAAAGTTCACCCGGAGAACTACATTTCCATCATGGTGCTG CACAACCACCCGTTCTCACGCGGCTCGGTCCACATTGCCTCCGGCAAGAGTGAAGATAAGCCCACCTACGACCCA AACCTGCTCTCTCACCCGCTTGATCTGGAGATCATGGCCCGGCAGGTGCAGTACATGGGGCGCGTTTCCGAGACT GCTCCACTCTCTGGTCTGCTCAAATCCGGCAAGCGCATGCCTCAGAGTGCCATCGATTTGAGTGATCTGGACCAT GTGAAGGATGTCGTTCAGGATCTCTTGTTCACGTGTTTCCATCCTGTGGGCTCGTGTGCCATGCTGCCGAGGGAG CTTGGCGGCGTTGTTGATTCTGAGCTCAGGGTTTATGGCACCAAGAACGTGAGGGTTGTTGATGCCAGTATTTTC CCGCTTGAGATCGCTGGAAATATCCAGGCTACTGTTTATGCGGTTGCGGAGCACGCAGCGGATTTGATCAAATCC CAGTAG |
| Gene | >Pro_DTO377G3_2|g9650.t1 ATGGATGACTACGACTATATCATCATCGGCGCTGGAATCGGCGGTCTTGTTCTGGCAAACCGTCTAAGCGAGGAT CCCTCCGTCAGTGTCCTGCTCATTGAAGCTGGCGCCAATCGGATGGGAGATCCGCGTATTGATACGCCTGGATTG ATGGCTACCATGTATGGTAACCCGGACTTTGACTGGGATTACATGAGTATTCCGCAGGTATGCCCGTCTTAAACA TCGCCTTCTCGGATGAAAACCTGATTAATGAAAAGGTCCATGTGAAAAACCGACAGATCGGTCAGCCCCGCGGTC GGGTCGTCGGCGGCTCTTCCGCATTGAACTTTTCCGCTATTGTGTACCCTGCCGCGTCGAATTTTGACGCGTGGA AGGCGCTAGGAAATGACGGTTGGAGTGCCAAGGATATGGCCCCCTATCTTCGAAAGTTCCACTCGTATGTCGCCC CTAGCGAGGCCACTGCCGAACTACTCGGCACAAGCCGGTACATGCAACTCGAGAACCAAGGATCGAATGGTCCTC TTCCTGTAACTTACCCAGATATATATGGGCCATTCCACAAGGCCTGGAATGAGACATTTGCGCAATTGGGCTGGG AAACCGATGCCGACCCTATTGATGGCCACAAACTCGGCGCTTTTACTTCCCCGATAAGCGTCGATGTCAAGACGG GTAAAAGAGGGTATGCAGCGGCATACTACTCCCCCGAGGTCGCGGCGCGGCCAAACCTACGGCTTCTTGCAGAGA CAATGGTCGAGCGAATTATCCTCTCCCAACAGGAGGGAGATGTCGTTGCCACTGGTGTGCAGGTCAAGACTCAGG ACAGTTCATACGAGATCAAGGCAAAGAAGGAAGTGATCGTCTGCGCAGGCAGCCTGAATTCCCCTCAGGTGCTCG AGCTCTCGGGTATCGGCGGTGCAGATCTTCTCCAGACCCACGGCATCCCGGTGATCATCGACAACCCCGCCGTGG GCGAGAATCTTCAAGATCACAGTATCGCGAGCGTCAACTTTGAGATCGCCGATGGCCAGATCTCGGGCGATATCA TGCGTGATCCCAACGTCGTACAGGCAGTCATGAAGCTCTACGAGGAGACGCGCGGAGGCCCGCTAACCGGCATAC CTCTCAACATGGCCTATCTCCCGCTAGTAGATGGAACCGGCGTCGTGCCGAAAGAAGAACTCGACGCCCTGCTCT CGAAATACCTCGACAACGACAGCACACCAGCTAGCCTGCAAGCGCAATATTCTCAAATCCGCAGTATACTCCTCG ACCGGAACGAGAACTCCACGCACTACCTCTTCCTCCCTGCCCAGCTCAACGGGAAACCAGACCAAACAACCATCA CCGACGTGCTGGCCAAAGTTCACCCGGAGAACTACATTTCCATCATGGTGCTGCACAACCACCCGTTCTCACGCG GCTCGGTCCACATTGCCTCCGGCAAGAGTGAAGATAAGCCCACCTACGACCCAAACCTGCTCTCTCACCCGCTTG ATCTGGAGATCATGGCCCGGCAGGTGCAGTACATGGGGCGCGTTTCCGAGACTGCTCCACTCTCTGGTCTGCTCA AATCCGGCAAGCGCATGCCTCAGAGTGCCATCGATTTGAGTGATCTGGACCATGTGAAGGATGTCGTTCAGGATC TCTTGTTCACGTGTTTCCATCCTGTGGGCTCGTGTGCCATGCTGCCGAGGGAGCTTGGCGGCGTTGTTGATTCTG AGCTCAGGGTTTATGGCACCAAGAACGTGAGGGTTGTTGATGCCAGTATTTTCCCGCTTGAGATCGCTGGAAATA TCCAGGCTACTGTTTATGCGGTTGCGGAGCACGCAGCGGATTTGATCAAATCCCAGTAG |