Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9640.t1
Gene name
Locationscaffold_54:65588..66184
Strand-
Gene length (bp)596
Transcript length (bp)462
Coding sequence length (bp)462
Protein length (aa) 154

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07019 EMC6 EMC6 1.2E-21 26 146

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22
2 127 149 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9640.t1
MAPTKQELSLLITPLVPEAVQHNNRVLSSLHSLTSFLLGLSAGILALQSGYGFAFYFLGTILVSGLFHAVLIHRS
GGAGAGSFFPGSTPGEIEGVIEMNEKSKAVRMQLAGKAGPRKIIRKGAWRDVWFGGGVMSEALSGFVLGWAGVGG
VLR*
Coding >Pro_DTO377G3_2|g9640.t1
ATGGCACCCACAAAGCAGGAACTCTCCCTGCTAATCACCCCTCTCGTACCTGAGGCCGTCCAGCACAACAACCGC
GTCCTTTCCTCCCTCCACAGCCTAACCTCCTTCCTCCTCGGCCTGTCCGCCGGGATTCTAGCCCTCCAATCAGGC
TACGGATTCGCCTTTTACTTCCTCGGCACGATCCTGGTATCAGGGCTCTTCCATGCGGTTCTGATTCACCGCTCC
GGTGGTGCAGGTGCCGGCTCGTTCTTCCCCGGTAGTACCCCTGGGGAGATCGAGGGTGTTATTGAAATGAATGAG
AAGAGCAAGGCTGTGCGCATGCAGCTTGCTGGCAAGGCTGGTCCGAGGAAGATTATCCGCAAGGGCGCTTGGCGG
GATGTTTGGTTTGGTGGCGGTGTTATGAGTGAGGCGCTTAGCGGGTTTGTTCTTGGGTGGGCTGGTGTTGGGGGT
GTTTTGAGGTGA
Transcript >Pro_DTO377G3_2|g9640.t1
ATGGCACCCACAAAGCAGGAACTCTCCCTGCTAATCACCCCTCTCGTACCTGAGGCCGTCCAGCACAACAACCGC
GTCCTTTCCTCCCTCCACAGCCTAACCTCCTTCCTCCTCGGCCTGTCCGCCGGGATTCTAGCCCTCCAATCAGGC
TACGGATTCGCCTTTTACTTCCTCGGCACGATCCTGGTATCAGGGCTCTTCCATGCGGTTCTGATTCACCGCTCC
GGTGGTGCAGGTGCCGGCTCGTTCTTCCCCGGTAGTACCCCTGGGGAGATCGAGGGTGTTATTGAAATGAATGAG
AAGAGCAAGGCTGTGCGCATGCAGCTTGCTGGCAAGGCTGGTCCGAGGAAGATTATCCGCAAGGGCGCTTGGCGG
GATGTTTGGTTTGGTGGCGGTGTTATGAGTGAGGCGCTTAGCGGGTTTGTTCTTGGGTGGGCTGGTGTTGGGGGT
GTTTTGAGGTGA
Gene >Pro_DTO377G3_2|g9640.t1
ATGGCACCCACAAAGCAGGAACTCTCCCTGCTAATCACCCCTCTCGTACCTGAGGCCGTCCAGCACAACAACCGC
GTATGACTATCCCACATCCCACCCAACCGCCCCTATCCCGCACCACATGCATATCATATCCCCTACACCAATATC
AGACCGCATCTGTATCCTTCATTTTAGATGTTACACCCAACTAACAACCCGGGAAATAGGTCCTTTCCTCCCTCC
ACAGCCTAACCTCCTTCCTCCTCGGCCTGTCCGCCGGGATTCTAGCCCTCCAATCAGGCTACGGATTCGCCTTTT
ACTTCCTCGGCACGATCCTGGTATCAGGGCTCTTCCATGCGGTTCTGATTCACCGCTCCGGTGGTGCAGGTGCCG
GCTCGTTCTTCCCCGGTAGTACCCCTGGGGAGATCGAGGGTGTTATTGAAATGAATGAGAAGAGCAAGGCTGTGC
GCATGCAGCTTGCTGGCAAGGCTGGTCCGAGGAAGATTATCCGCAAGGGCGCTTGGCGGGATGTTTGGTTTGGTG
GCGGTGTTATGAGTGAGGCGCTTAGCGGGTTTGTTCTTGGGTGGGCTGGTGTTGGGGGTGTTTTGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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