Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9639.t1
Gene name
Locationscaffold_54:64317..65283
Strand+
Gene length (bp)966
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02548 Pantoate_transf Ketopantoate hydroxymethyltransferase 4.9E-105 11 270

GO

GO Term Description Terminal node
GO:0015940 pantothenate biosynthetic process Yes
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity Yes
GO:0042364 water-soluble vitamin biosynthetic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0032787 monocarboxylic acid metabolic process No
GO:0043436 oxoacid metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0009987 cellular process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044283 small molecule biosynthetic process No
GO:0003824 catalytic activity No
GO:0051188 cofactor biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0046394 carboxylic acid biosynthetic process No
GO:0016740 transferase activity No
GO:0019752 carboxylic acid metabolic process No
GO:0051186 cofactor metabolic process No
GO:0016742 hydroxymethyl-, formyl- and related transferase activity No
GO:0006732 coenzyme metabolic process No
GO:0006766 vitamin metabolic process No
GO:0072330 monocarboxylic acid biosynthetic process No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0006767 water-soluble vitamin metabolic process No
GO:0044237 cellular metabolic process No
GO:0016053 organic acid biosynthetic process No
GO:0009058 biosynthetic process No
GO:0006575 cellular modified amino acid metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0015939 pantothenate metabolic process No
GO:0042398 cellular modified amino acid biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0009108 coenzyme biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0043603 cellular amide metabolic process No
GO:0008150 biological_process No
GO:0043604 amide biosynthetic process No
GO:0044281 small molecule metabolic process No
GO:0008152 metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0009110 vitamin biosynthetic process No
GO:0006082 organic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9639.t1
MGSTTTSTRKKVTIQTIQNLYKKNEPITVLTASDFPSGHVADTAGMEIVLVGDSLAMVAMGMEDTNEVTMDEMLL
HCRSVNRAVKSAFTIADLPMGSYETTPEKALTSAIRMVKEGGMKGVKLEGGAEMASTIRKISQAGIPVMAHIGLT
PQRQHSLGGFRVQGKSAAGAVKLLRDALAVQKAGACMVLIEAVPPEIAGIITRRLSVPTIGIGSGNGCSGQVLVQ
VDMLGNFPEGRFLPKFVKTYADVWGEARRGIEAYREEVKNRAFPSVEYTYGVSKEVLEEFEKAVDEVAENEE*
Coding >Pro_DTO377G3_2|g9639.t1
ATGGGCTCAACAACCACCAGCACACGCAAAAAAGTAACAATCCAAACCATCCAAAACCTCTACAAAAAGAACGAA
CCCATCACAGTCCTTACAGCATCCGACTTCCCCAGTGGCCATGTCGCGGACACAGCCGGAATGGAGATCGTGCTC
GTAGGCGACAGCCTCGCAATGGTCGCAATGGGCATGGAAGACACAAACGAAGTAACAATGGACGAGATGCTCCTC
CACTGCCGCAGCGTAAACCGTGCTGTCAAGAGCGCCTTCACAATCGCAGACCTACCAATGGGCTCATACGAAACC
ACCCCAGAAAAGGCACTTACATCGGCAATCCGGATGGTGAAAGAAGGCGGGATGAAGGGCGTGAAACTCGAAGGC
GGGGCGGAGATGGCGTCTACGATCCGCAAGATCTCACAAGCGGGGATCCCCGTCATGGCGCACATCGGGCTAACG
CCGCAGCGGCAGCACTCGCTGGGCGGGTTCCGAGTCCAGGGCAAGTCAGCCGCGGGCGCTGTGAAACTGCTGCGG
GATGCATTGGCTGTGCAGAAAGCCGGTGCTTGTATGGTTCTTATTGAGGCTGTGCCGCCTGAGATTGCGGGTATT
ATTACGCGGCGACTGAGCGTGCCGACTATTGGGATTGGGTCTGGGAATGGGTGTTCTGGACAGGTGCTTGTGCAG
GTTGATATGTTAGGGAATTTCCCGGAGGGGAGGTTCTTGCCGAAGTTTGTTAAGACGTATGCGGATGTTTGGGGG
GAGGCGAGGAGGGGGATTGAGGCTTATAGGGAGGAGGTTAAGAATAGGGCTTTTCCTTCGGTGGAGTATACCTAT
GGTGTTTCTAAGGAGGTGTTAGAGGAGTTTGAGAAGGCTGTTGATGAGGTTGCGGAGAATGAGGAGTAA
Transcript >Pro_DTO377G3_2|g9639.t1
ATGGGCTCAACAACCACCAGCACACGCAAAAAAGTAACAATCCAAACCATCCAAAACCTCTACAAAAAGAACGAA
CCCATCACAGTCCTTACAGCATCCGACTTCCCCAGTGGCCATGTCGCGGACACAGCCGGAATGGAGATCGTGCTC
GTAGGCGACAGCCTCGCAATGGTCGCAATGGGCATGGAAGACACAAACGAAGTAACAATGGACGAGATGCTCCTC
CACTGCCGCAGCGTAAACCGTGCTGTCAAGAGCGCCTTCACAATCGCAGACCTACCAATGGGCTCATACGAAACC
ACCCCAGAAAAGGCACTTACATCGGCAATCCGGATGGTGAAAGAAGGCGGGATGAAGGGCGTGAAACTCGAAGGC
GGGGCGGAGATGGCGTCTACGATCCGCAAGATCTCACAAGCGGGGATCCCCGTCATGGCGCACATCGGGCTAACG
CCGCAGCGGCAGCACTCGCTGGGCGGGTTCCGAGTCCAGGGCAAGTCAGCCGCGGGCGCTGTGAAACTGCTGCGG
GATGCATTGGCTGTGCAGAAAGCCGGTGCTTGTATGGTTCTTATTGAGGCTGTGCCGCCTGAGATTGCGGGTATT
ATTACGCGGCGACTGAGCGTGCCGACTATTGGGATTGGGTCTGGGAATGGGTGTTCTGGACAGGTGCTTGTGCAG
GTTGATATGTTAGGGAATTTCCCGGAGGGGAGGTTCTTGCCGAAGTTTGTTAAGACGTATGCGGATGTTTGGGGG
GAGGCGAGGAGGGGGATTGAGGCTTATAGGGAGGAGGTTAAGAATAGGGCTTTTCCTTCGGTGGAGTATACCTAT
GGTGTTTCTAAGGAGGTGTTAGAGGAGTTTGAGAAGGCTGTTGATGAGGTTGCGGAGAATGAGGAGTAA
Gene >Pro_DTO377G3_2|g9639.t1
ATGGGCTCAACAACCACCAGCACACGCAAAAAAGTAACAATCCAAACCATCCAAAACCTCTACAAAAAGAACGAA
CCCATCACAGTCCTTACAGCATCCGACTTCCCCAGTGGCCATGTCGCGGACACAGCCGGAATGGAGATCGTGCTC
GTAGGCGACAGCCTCGCAATGGTCGCAATGGGCATGGAAGACACAAACGAAGTAACAATGGACGAGATGCTCCTC
CACTGCCGCAGCGTAAACCGTGCTGTCAAGAGCGCCTTCACAGTAAGTATATCCATGCATACATATACAATGCCT
ACGCCCGGCCAAGTTACCACATCTCACAACTCGCAATAGATCGCAGACCTACCAATGGGCTCATACGAAACCACC
CCAGAAAAGGCACTTACATCGGCAATCCGGATGGTGAAAGAAGGCGGGATGAAGGGCGTGAAACTCGAAGGCGGG
GCGGAGATGGCGTCTACGATCCGCAAGATCTCACAAGCGGGGATCCCCGTCATGGCGCACATCGGGCTAACGCCG
CAGCGGCAGCACTCGCTGGGCGGGTTCCGAGTCCAGGGCAAGTCAGCCGCGGGCGCTGTGAAACTGCTGCGGGAT
GCATTGGCTGTGCAGAAAGCCGGTGCTTGTATGGTTCTTATTGAGGCTGTGCCGCCTGAGATTGCGGGTATTATT
ACGCGGCGACTGAGCGTGCCGACTATTGGGATTGGGTCTGGGAATGGGTGTTCTGGACAGGTGCTTGTGCAGGTT
GATATGTTAGGGAATTTCCCGGAGGGGAGGTTCTTGCCGAAGTTTGTTAAGACGTATGCGGATGTTTGGGGGGAG
GCGAGGAGGGGGATTGAGGCTTATAGGGAGGAGGTTAAGAATAGGGCTTTTCCTTCGGTGGAGTATACCTATGGT
GTTTCTAAGGAGGTGTTAGAGGAGTTTGAGAAGGCTGTTGATGAGGTTGCGGAGAATGAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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