Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9630.t1
Gene name
Locationscaffold_54:43909..45179
Strand-
Gene length (bp)1270
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01208 URO-D Uroporphyrinogen decarboxylase (URO-D) 1.8E-128 9 360

GO

GO Term Description Terminal node
GO:0004853 uroporphyrinogen decarboxylase activity Yes
GO:0006779 porphyrin-containing compound biosynthetic process Yes
GO:0046483 heterocycle metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0016831 carboxy-lyase activity No
GO:0008150 biological_process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006778 porphyrin-containing compound metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0008152 metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009058 biosynthetic process No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0033014 tetrapyrrole biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0033013 tetrapyrrole metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0016829 lyase activity No
GO:0016830 carbon-carbon lyase activity No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:1901576 organic substance biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9630.t1
MQEQFEPLKNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHEAKGGRDFFECCRTPEIASTLTLQPVERYEGLID
AAIIFSDILVIPQAMGMVVEMLDKKGPHFPAPLDSPTDGQYEIVMAKNVDVKAELDYVYKAITLTRHKLKGRVPL
IGFCGAPWTLLCYMVEGGGSKLFVQSKKWVYKYPAEAQALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSP
VSFKSFSLPYLRHISANLPKRLQEMGLEPVPMTVFAKGAWYALDDLCDSGYNVVGLDWLHDAGDAMRIANGRVTI
QGNADPGMLYGGPPAITATVEPMVEGFKKGKQGWICNLGHGVTPFVDPENLKFFFEEIHRLTV*
Coding >Pro_DTO377G3_2|g9630.t1
ATGCAGGAACAATTTGAGCCTTTGAAAAACGACCTGCTGCTGAGGGCTGCACGGGGTGAGAAGGTGGAGCGTCCT
CCGATATGGGTTATGCGACAGGCTGGCCGATACCTCCCCGAATACCATGAGGCCAAGGGCGGCCGTGACTTCTTC
GAATGCTGCCGCACACCCGAAATCGCATCAACCTTGACCCTCCAGCCCGTTGAGCGTTATGAAGGCCTCATCGAT
GCCGCAATTATCTTCTCCGATATTCTAGTCATTCCTCAGGCCATGGGCATGGTCGTGGAGATGCTGGACAAGAAG
GGACCTCATTTCCCCGCGCCACTCGACTCTCCGACGGACGGGCAGTACGAAATTGTGATGGCGAAGAATGTGGAT
GTTAAAGCAGAGCTGGACTACGTCTATAAGGCAATTACCCTTACACGACACAAGCTGAAGGGCCGGGTGCCCCTG
ATCGGCTTCTGTGGTGCACCATGGACCCTGCTGTGTTACATGGTCGAAGGCGGTGGCAGCAAGCTCTTCGTGCAG
TCCAAGAAATGGGTCTACAAGTACCCTGCCGAGGCGCAGGCTCTTCTGCAGAAGATTGCCGAGATATGTGTGGAA
TATCTCGCACTTCAGGTCGCTGCCGGAGCGCAGCTGGTGCAGGTCTTTGACTCGTGGGCCGGGGAGCTGTCTCCC
GTCTCGTTCAAGTCCTTCTCGCTTCCTTACCTGCGCCACATTTCCGCCAACCTCCCCAAGCGGCTGCAGGAGATG
GGCTTGGAGCCTGTGCCTATGACCGTTTTTGCTAAGGGCGCCTGGTACGCTCTGGATGACCTTTGCGATTCGGGC
TATAATGTTGTCGGCTTGGACTGGCTGCACGATGCCGGCGATGCCATGCGTATTGCCAACGGTCGTGTGACTATC
CAAGGCAATGCGGATCCTGGCATGCTTTACGGTGGGCCTCCTGCTATTACTGCCACTGTTGAGCCCATGGTCGAG
GGTTTCAAGAAGGGCAAGCAGGGATGGATCTGCAACTTAGGCCACGGTGTCACTCCATTCGTCGACCCCGAGAAC
CTCAAGTTCTTCTTTGAGGAAATCCACCGTTTGACCGTATAA
Transcript >Pro_DTO377G3_2|g9630.t1
ATGCAGGAACAATTTGAGCCTTTGAAAAACGACCTGCTGCTGAGGGCTGCACGGGGTGAGAAGGTGGAGCGTCCT
CCGATATGGGTTATGCGACAGGCTGGCCGATACCTCCCCGAATACCATGAGGCCAAGGGCGGCCGTGACTTCTTC
GAATGCTGCCGCACACCCGAAATCGCATCAACCTTGACCCTCCAGCCCGTTGAGCGTTATGAAGGCCTCATCGAT
GCCGCAATTATCTTCTCCGATATTCTAGTCATTCCTCAGGCCATGGGCATGGTCGTGGAGATGCTGGACAAGAAG
GGACCTCATTTCCCCGCGCCACTCGACTCTCCGACGGACGGGCAGTACGAAATTGTGATGGCGAAGAATGTGGAT
GTTAAAGCAGAGCTGGACTACGTCTATAAGGCAATTACCCTTACACGACACAAGCTGAAGGGCCGGGTGCCCCTG
ATCGGCTTCTGTGGTGCACCATGGACCCTGCTGTGTTACATGGTCGAAGGCGGTGGCAGCAAGCTCTTCGTGCAG
TCCAAGAAATGGGTCTACAAGTACCCTGCCGAGGCGCAGGCTCTTCTGCAGAAGATTGCCGAGATATGTGTGGAA
TATCTCGCACTTCAGGTCGCTGCCGGAGCGCAGCTGGTGCAGGTCTTTGACTCGTGGGCCGGGGAGCTGTCTCCC
GTCTCGTTCAAGTCCTTCTCGCTTCCTTACCTGCGCCACATTTCCGCCAACCTCCCCAAGCGGCTGCAGGAGATG
GGCTTGGAGCCTGTGCCTATGACCGTTTTTGCTAAGGGCGCCTGGTACGCTCTGGATGACCTTTGCGATTCGGGC
TATAATGTTGTCGGCTTGGACTGGCTGCACGATGCCGGCGATGCCATGCGTATTGCCAACGGTCGTGTGACTATC
CAAGGCAATGCGGATCCTGGCATGCTTTACGGTGGGCCTCCTGCTATTACTGCCACTGTTGAGCCCATGGTCGAG
GGTTTCAAGAAGGGCAAGCAGGGATGGATCTGCAACTTAGGCCACGGTGTCACTCCATTCGTCGACCCCGAGAAC
CTCAAGTTCTTCTTTGAGGAAATCCACCGTTTGACCGTATAA
Gene >Pro_DTO377G3_2|g9630.t1
ATGCAGGAACAATTTGAGCCTTTGAAAAACGACCTGCTGCTGAGGGCTGCACGGGGTATGTTTACTCTGTATCTT
AGTTTTGGCCGGAGCTGACAAATCGTAGGTGAGAAGGTGGAGCGTCCTCCGATATGGGTTATGCGACAGGGTGAG
TTAGACTTATTCGTGCACTACGTTCCCAAGGACACTTGATTGAGATTTCTTTTTCTATTGAACAGCTGGCCGATA
CCTCCCCGAATACCATGAGGCCAAGGGCGGCCGTGACTTCTTCGAATGCTGCCGCACACCCGAAATCGCATCAAC
CTTGACCCTCCAGCCCGTTGAGCGTTATGAAGGCCTCATCGATGCCGCAATTATCTTCTCCGATATTCTAGTCAT
TCCTCAGGCCATGGGCATGGTCGTGGAGATGCTGGACAAGAAGGGACCTCATTTCCCCGCGCCACTCGACTCTCC
GACGGACGGGCAGTACGAAATTGTGATGGCGAAGAATGTGGATGTTAAAGCAGAGCTGGACTACGTCTATAAGGC
AATTACCCTTACACGACACAAGCTGAAGGGCCGGGTGCCCCTGATCGGCTTCTGTGGTGCACCATGGACCCTGCT
GTGTTACATGGTCGAAGGCGGTGGCAGCAAGCTCTTCGTGCAGTCCAAGAAATGGGTCTACAAGTACCCTGCCGA
GGCGCAGGCTCTTCTGCAGAAGATTGCCGAGATATGTGTGGAATATCTCGCACTTCAGGTCGCTGCCGGAGCGCA
GCTGGTGCAGGTCTTTGACTCGTGGGCCGGGGAGCTGTCTCCCGTCTCGTTCAAGTCCTTCTCGCTTCCTTACCT
GCGCCACATTTCCGCCAACCTCCCCAAGCGGCTGCAGGAGATGGGCTTGGAGCCTGTGCCTATGACCGTTTTTGC
TAAGGGCGCCTGGTACGCTCTGGATGACCTTTGCGATTCGGGCTATAATGTTGTCGGCTTGGACTGGCTGCACGA
TGCCGGCGATGCCATGCGTATTGCCAACGGTCGTGTGACTATCCAAGGCAATGCGGATCCTGGCATGCTTTACGG
TGGGCCTCCTGCTATTACTGCCACTGTTGAGCCCATGGTCGAGGGTTTCAAGAAGGGCAAGCAGGGATGGATCTG
CAACTTAGGCCACGGTAAGTCGAACCTTATGATTTGGCGCTGTATGCCATCTAACTAATTGTCTCTCAACGCAGG
TGTCACTCCATTCGTCGACCCCGAGAACCTCAAGTTCTTCTTTGAGGAAATCCACCGTTTGACCGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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