Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9610.t1
Gene name
Locationscaffold_52:87819..89102
Strand-
Gene length (bp)1283
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03388 Lectin_leg-like Legume-like lectin family 4.0E-65 34 255
PF18483 Bact_lectin Bacterial lectin 5.0E-08 50 247

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 290 312 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9610.t1
MRLPSISSLLCFAGLVALPVNAYDDPNIKSIPLRTHSLSPPYLDSDFQSRWFDFGGDTVIRADKYVRLTADRPSQ
QGWISSRVPLTATNWQIELEFEIHGSGNLHGDGFALWLTKERATQGPVFGSTDRFEGLGVFFDTYKNNRPGVSFP
YVMAMMGDGQTSYDQAHDGKANELAGCSARGLRSAPVPTKARLTYFQDKSLSLELQYKSEDTWTECFNLSAEDSN
IAIPSVAYLGLSAETGELSDNHDIISLKAENLYSLNRGKTTEDRSKGRVRSSPKPVKELKEKSSWTWFLFKIVLF
FGVVVGGYFGWTVYRTKTRSSRF*
Coding >Pro_DTO377G3_2|g9610.t1
ATGCGTCTTCCGTCTATTTCCTCGCTTCTCTGCTTCGCGGGCTTGGTCGCCTTACCCGTGAATGCCTACGATGAC
CCAAATATCAAAAGCATCCCCCTTCGCACCCATAGCCTCTCTCCGCCATACCTCGATTCAGACTTCCAAAGCCGC
TGGTTCGACTTCGGAGGAGATACAGTAATCCGCGCTGACAAATACGTTCGCCTCACGGCTGACCGGCCATCGCAG
CAAGGATGGATCTCCTCCCGCGTACCTCTGACCGCAACCAATTGGCAGATTGAGCTCGAGTTTGAGATCCACGGC
TCCGGCAACTTGCATGGTGATGGATTTGCCCTCTGGCTCACCAAGGAGCGTGCCACACAGGGCCCTGTCTTCGGT
TCGACAGACAGATTCGAGGGTCTCGGTGTCTTCTTCGACACCTATAAGAACAACCGCCCCGGTGTGTCGTTCCCT
TACGTCATGGCGATGATGGGCGATGGGCAGACCTCCTATGACCAGGCGCATGACGGCAAGGCGAACGAGCTAGCC
GGTTGCTCTGCTCGTGGTCTCCGCAGCGCCCCAGTTCCCACAAAGGCTCGTCTTACCTACTTCCAGGACAAGTCC
CTGTCCCTGGAGCTACAGTACAAGTCCGAAGACACATGGACCGAGTGCTTCAATCTTTCCGCTGAGGATTCTAAC
ATCGCCATCCCCTCCGTCGCATACCTGGGCCTCTCCGCCGAGACCGGCGAGCTGAGTGACAACCACGACATCATC
TCCCTCAAGGCCGAGAACCTATACTCACTTAACCGCGGGAAGACCACAGAAGACCGGTCCAAGGGCCGTGTCCGC
TCCTCCCCCAAGCCTGTTAAGGAGCTCAAGGAGAAGAGTAGCTGGACTTGGTTCCTCTTCAAGATCGTGCTGTTC
TTCGGCGTTGTTGTCGGTGGTTACTTTGGCTGGACGGTCTACCGGACCAAGACCCGGTCATCGCGTTTCTAA
Transcript >Pro_DTO377G3_2|g9610.t1
ATGCGTCTTCCGTCTATTTCCTCGCTTCTCTGCTTCGCGGGCTTGGTCGCCTTACCCGTGAATGCCTACGATGAC
CCAAATATCAAAAGCATCCCCCTTCGCACCCATAGCCTCTCTCCGCCATACCTCGATTCAGACTTCCAAAGCCGC
TGGTTCGACTTCGGAGGAGATACAGTAATCCGCGCTGACAAATACGTTCGCCTCACGGCTGACCGGCCATCGCAG
CAAGGATGGATCTCCTCCCGCGTACCTCTGACCGCAACCAATTGGCAGATTGAGCTCGAGTTTGAGATCCACGGC
TCCGGCAACTTGCATGGTGATGGATTTGCCCTCTGGCTCACCAAGGAGCGTGCCACACAGGGCCCTGTCTTCGGT
TCGACAGACAGATTCGAGGGTCTCGGTGTCTTCTTCGACACCTATAAGAACAACCGCCCCGGTGTGTCGTTCCCT
TACGTCATGGCGATGATGGGCGATGGGCAGACCTCCTATGACCAGGCGCATGACGGCAAGGCGAACGAGCTAGCC
GGTTGCTCTGCTCGTGGTCTCCGCAGCGCCCCAGTTCCCACAAAGGCTCGTCTTACCTACTTCCAGGACAAGTCC
CTGTCCCTGGAGCTACAGTACAAGTCCGAAGACACATGGACCGAGTGCTTCAATCTTTCCGCTGAGGATTCTAAC
ATCGCCATCCCCTCCGTCGCATACCTGGGCCTCTCCGCCGAGACCGGCGAGCTGAGTGACAACCACGACATCATC
TCCCTCAAGGCCGAGAACCTATACTCACTTAACCGCGGGAAGACCACAGAAGACCGGTCCAAGGGCCGTGTCCGC
TCCTCCCCCAAGCCTGTTAAGGAGCTCAAGGAGAAGAGTAGCTGGACTTGGTTCCTCTTCAAGATCGTGCTGTTC
TTCGGCGTTGTTGTCGGTGGTTACTTTGGCTGGACGGTCTACCGGACCAAGACCCGGTCATCGCGTTTCTAA
Gene >Pro_DTO377G3_2|g9610.t1
ATGCGTCTTCCGTCTATTTCCTCGCTTCTCTGCTTCGCGGGCTTGGTCGCCTTACCCGTGAATGCCTACGATGAC
CCAAATATCAAAAGCATCCCCGTATGTGCTCAATGTTGACTCCGTTTCAAGCCGAGGTACTAACTTTGGACATCT
GTCAGCTTCGCACCCATAGCCTCTCTCCGGTATGATCATAACCCGCGAACACACTGTGCACGGATCGTGCTCCGA
GGAGGAATATCAGTATTGACCGATGTAACAGCCATACCTCGATTCAGACTTCCAAAGCCGCTGGTTCGACTTCGG
AGGAGATACAGTAATCCGCGCTGACAAGTGAGATATTCCGGTCTTCAGGTGGACTCTGTAATCAGTGCTGATTTT
CGTCTTTGTTCAGATACGTTCGCCTCACGGCTGACCGGCCATCGCAGCAAGGATGGATCTCCTCCCGCGTACCTC
TGACCGCAACCAATTGGCAGGTAAATTCACGAACCCCGCGGAACAGAATATGGGCCAAAAGCTCACGTACGCCTC
TGCTAGATTGAGCTCGAGTTTGAGATCCACGGCTCCGGCAACTTGCATGGTGATGGATTTGCCCTCTGGCTCACC
AAGGAGCGTGCCACACAGGGCCCTGTCTTCGGTTCGACAGACAGATTCGAGGGTCTCGGTGTCTTCTTCGACACC
TATAAGAACAACCGCCCCGGTGTGTCGTTCCCTTACGTCATGGCGATGATGGGCGATGGGCAGACCTCCTATGAC
CAGGCGCATGACGGCAAGGCGAACGAGCTAGCCGGTTGCTCTGTGAGTTGACATTGATTCGCGGCTGTTTTGGAT
ATACCGCTAACTGTTCACAGGCTCGTGGTCTCCGCAGCGCCCCAGTTCCCACAAAGGCTCGTCTTACCTACTTCC
AGGACAAGTCCCTGTCCCTGGAGCTACAGTACAAGTCCGAAGACACATGGACCGAGTGCTTCAATCTTTCCGCTG
AGGATTCTAACATCGCCATCCCCTCCGTCGCATACCTGGGCCTCTCCGCCGAGACCGGCGAGCTGAGTGACAACC
ACGACATCATCTCCCTCAAGGCCGAGAACCTATACTCACTTAACCGCGGGAAGACCACAGAAGACCGGTCCAAGG
GCCGTGTCCGCTCCTCCCCCAAGCCTGTTAAGGAGCTCAAGGAGAAGAGTAGCTGGACTTGGTTCCTCTTCAAGA
TCGTGCTGTTCTTCGGCGTTGTTGTCGGTGGTTACTTTGGCTGGACGGTCTACCGGACCAAGACCCGGTCATCGC
GTTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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