Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9603.t1
Gene name
Locationscaffold_52:70327..71673
Strand+
Gene length (bp)1346
Transcript length (bp)1059
Coding sequence length (bp)1059
Protein length (aa) 353

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13177 DNA_pol3_delta2 DNA polymerase III, delta subunit 4.2E-10 21 184
PF00004 AAA ATPase family associated with various cellular activities (AAA) 7.3E-06 38 179

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0005488 binding No
GO:0008144 drug binding No
GO:0000166 nucleotide binding No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0003674 molecular_function No
GO:0032555 purine ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9603.t1
MALLVDKLRPRTLDALTYHPELSDRLRSLAQSGDFPHLLVYGPSGAGKKTRVIATLKELYGPGVEKIKIDARVFQ
TTSNRKLEFNIVSSVYHLEITPADVGNYDRVVVQELLKEVAQTQQVDLGAKQRFKVVVINEADHLTRDAQAALRR
TMEKYSPNLRLILLANSTSNIIAPIRSRTLLVRVAAPTEADICSALHLAGKKEGWTESQVLNKRIAKESGRNLRR
ALLMFESIYAQNEKVTDKTLIPPPDWEALVALTADEIMAERSPARLLQVRARLYDLLTHCIPPTTILKTLTFKLV
ARVDDALKPEVIKWSAFYEHRIKLGSKIIFHLEAFVAKFMRIYESYLMGMDF*
Coding >Pro_DTO377G3_2|g9603.t1
ATGGCTCTCCTTGTGGATAAACTACGGCCACGCACCCTCGATGCTCTCACATACCACCCCGAGCTCTCTGATCGC
CTGCGGTCACTGGCACAAAGCGGAGATTTTCCCCATCTACTAGTCTATGGACCCTCCGGCGCTGGCAAGAAAACA
CGGGTCATTGCAACACTAAAAGAACTGTACGGCCCCGGTGTCGAGAAGATCAAGATCGACGCCAGAGTCTTCCAA
ACGACGAGCAACCGAAAGCTAGAGTTCAATATTGTCTCATCGGTGTACCATCTCGAGATCACCCCCGCAGATGTC
GGAAACTATGACCGAGTAGTCGTTCAGGAATTGCTTAAAGAGGTCGCGCAGACGCAACAGGTGGATCTCGGCGCG
AAGCAGCGGTTCAAGGTCGTCGTGATTAACGAAGCCGATCATCTCACACGAGATGCCCAGGCAGCTCTCAGACGT
ACCATGGAGAAATACAGTCCCAATCTACGATTGATTCTCCTGGCCAACAGTACCTCCAATATCATTGCACCGATT
CGGTCTCGAACCCTGCTGGTCAGGGTTGCAGCGCCAACTGAAGCTGACATTTGCTCTGCGCTCCATCTCGCAGGA
AAAAAGGAAGGATGGACCGAGTCTCAGGTGCTGAACAAGAGGATTGCGAAGGAGAGTGGACGCAATCTGCGTCGT
GCGCTGCTCATGTTTGAGTCTATTTATGCGCAAAATGAAAAGGTTACAGACAAGACCCTCATCCCGCCTCCGGAC
TGGGAAGCCCTTGTTGCCCTAACGGCTGATGAGATTATGGCTGAGCGTTCACCAGCTCGGCTGTTGCAAGTCCGC
GCACGTCTTTATGATCTTCTGACCCATTGCATCCCCCCAACAACTATTTTGAAGACCTTGACATTCAAGCTTGTT
GCACGAGTTGACGATGCTCTGAAACCAGAAGTTATCAAGTGGTCTGCGTTCTATGAGCACCGCATCAAGCTGGGA
AGTAAAATAATCTTCCATCTCGAAGCCTTCGTGGCCAAGTTCATGCGCATCTATGAAAGCTATCTGATGGGCATG
GATTTCTAA
Transcript >Pro_DTO377G3_2|g9603.t1
ATGGCTCTCCTTGTGGATAAACTACGGCCACGCACCCTCGATGCTCTCACATACCACCCCGAGCTCTCTGATCGC
CTGCGGTCACTGGCACAAAGCGGAGATTTTCCCCATCTACTAGTCTATGGACCCTCCGGCGCTGGCAAGAAAACA
CGGGTCATTGCAACACTAAAAGAACTGTACGGCCCCGGTGTCGAGAAGATCAAGATCGACGCCAGAGTCTTCCAA
ACGACGAGCAACCGAAAGCTAGAGTTCAATATTGTCTCATCGGTGTACCATCTCGAGATCACCCCCGCAGATGTC
GGAAACTATGACCGAGTAGTCGTTCAGGAATTGCTTAAAGAGGTCGCGCAGACGCAACAGGTGGATCTCGGCGCG
AAGCAGCGGTTCAAGGTCGTCGTGATTAACGAAGCCGATCATCTCACACGAGATGCCCAGGCAGCTCTCAGACGT
ACCATGGAGAAATACAGTCCCAATCTACGATTGATTCTCCTGGCCAACAGTACCTCCAATATCATTGCACCGATT
CGGTCTCGAACCCTGCTGGTCAGGGTTGCAGCGCCAACTGAAGCTGACATTTGCTCTGCGCTCCATCTCGCAGGA
AAAAAGGAAGGATGGACCGAGTCTCAGGTGCTGAACAAGAGGATTGCGAAGGAGAGTGGACGCAATCTGCGTCGT
GCGCTGCTCATGTTTGAGTCTATTTATGCGCAAAATGAAAAGGTTACAGACAAGACCCTCATCCCGCCTCCGGAC
TGGGAAGCCCTTGTTGCCCTAACGGCTGATGAGATTATGGCTGAGCGTTCACCAGCTCGGCTGTTGCAAGTCCGC
GCACGTCTTTATGATCTTCTGACCCATTGCATCCCCCCAACAACTATTTTGAAGACCTTGACATTCAAGCTTGTT
GCACGAGTTGACGATGCTCTGAAACCAGAAGTTATCAAGTGGTCTGCGTTCTATGAGCACCGCATCAAGCTGGGA
AGTAAAATAATCTTCCATCTCGAAGCCTTCGTGGCCAAGTTCATGCGCATCTATGAAAGCTATCTGATGGGCATG
GATTTCTAA
Gene >Pro_DTO377G3_2|g9603.t1
ATGGCTCTCCTTGTGGATAAACTACGGCCACGCACCCTCGATGCTCTCACATACCACCCCGAGCTCTCTGATCGC
CTGCGGTCACTGGTAAGAAAGTCTGAGCTGCGGAACAGGACACAATTTTAACATAAGGTACCCCTAACAGGCACA
AAGCGGAGATTTTCCCCATCTACTAGTCTATGGACCCTCCGGCGCTGGCAAGAAAACACGGGTCATTGCAACACT
AAAAGAACTGTACGGCCCCGGTGTCGAGAAGATCAAGATCGACGCCAGAGTCTTCCAAACGACGAGCAACCGAAA
GCTAGAGTTCAATATTGTCTCATCGGTGTACCATCTCGAGATCACCCCCGCAGATGTCGGAAACTATGACCGAGT
AGTCGTTCAGGAATTGCTTAAAGAGGTCGCGCAGACGCAACAGGTGGATCTCGGCGCGAAGCAGCGGTTCAAGGT
CGTCGTGATTAACGAAGCCGATCATCTCACACGAGATGCCCAGGCAGCTCTCAGACGTACCATGGAGAAATACAG
TCCCAATCTACGATTGATTCTCCTGGCCAACAGTACCTCCAATATCATTGCACCGATTCGGTCTCGAACCCTGCT
GGTCAGGGTTGCAGCGCCAACTGAAGCTGACATTTGCTCTGCGCTCCATCTCGCAGGAAAAAAGGAAGGATGGAC
CGAGTCTCAGGTGCTGAACAAGAGGATTGCGAAGGAGAGTGGACGCAATCTGCGTCGTGCGCTGCTCATGTTTGA
GTCTATTTATGCGCAAAAGTGAGTTTCTACTTCGGTTCCCATTGGCCTGGATTTTAGAAGCTTACGTTTTCTTGG
AAATGTAGTGAAAAGGTTACAGACAAGACCCTCATCCCGCCTCCGGACTGGGAAGCCCTTGTTGCCCTAACGGCT
GATGAGATTATGGCTGAGCGTTCACCAGCTCGGCTGTTGCAAGTCCGCGCACGTCTTTATGATCTTCTGACCCAT
TGCATCCCCCCAACAACTATTTTGAAGGTGTGTATACACCTATTCAATGAACATGCTCCAGATATTAACTGCTGG
TGCTAGACCTTGACATTCAAGCTTGTTGCACGAGTTGACGATGCTCTGAAACCAGAAGTTATCAAGTGGTCTGCG
TTCTATGAGCACCGCATCAAGCTGGGAAGTGTAAGTTATTGATGGTTAGCATTGCCATCAATATAAGCTAATGAA
TATTTCGATACAGAAAATAATCTTCCATCTCGAAGCCTTCGTGGCCAAGTTCATGCGCATCTATGAAAGGTATAC
TTCCCCTGGATAATTTAATGGAGGCATATAACTAATAGCACTTTAGCTATCTGATGGGCATGGATTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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