Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9600.t1
Gene name
Locationscaffold_52:64136..65478
Strand-
Gene length (bp)1342
Transcript length (bp)1290
Coding sequence length (bp)1290
Protein length (aa) 430

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 3.9E-06 355 405

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005488 binding No
GO:0005515 protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9600.t1
MNGHGTQVRTGRTSPPAAPFGYSFLSPMDTPFEQAPALPPGPSLLDDNESNMLDNFFTTMNANHFTNDFWMRQEH
KSGTPNFDWSGELPPNFEGSTTSLSQPSFQQHGLGKAAGGIITDNPTSSDIFAAASMLYHSGLNGSELGSTLAQQ
AFAGQSLPTHGIQRKINSHTGSVAQGSASSPPRAGVPVGYHTSEMFFDVRDPIPADQHPSRKARSLRWGSDASFM
DQGYLRPPDQPDEEQRTSDLLDHLGCFEPQSSAANTRAPSPERMVGAPPQGAVFRSGAVLDESLHPRKRPRTALK
YEGDEDSDEDDARPHSRKSRGSISQGRRASTDMSRKARVQPGSKTARENLTEEQKRTNHILSEQKRRNLIRQGFE
DLCTLVPALRGGGFSKSAMLTGAADWLEDLLRGNDILQSQLRELKGMNGLVMPR*
Coding >Pro_DTO377G3_2|g9600.t1
ATGAATGGACATGGCACTCAAGTTCGGACTGGGCGCACGTCTCCCCCGGCTGCTCCCTTTGGATACTCGTTTCTC
TCCCCCATGGACACACCCTTTGAACAGGCACCTGCTCTACCCCCGGGACCTTCTCTTCTTGACGATAACGAATCC
AATATGCTTGATAACTTCTTTACTACCATGAACGCAAACCACTTTACGAATGATTTCTGGATGCGACAAGAACAT
AAATCCGGGACACCCAACTTTGACTGGTCAGGTGAGCTGCCGCCCAACTTCGAAGGATCAACCACATCCCTATCG
CAGCCCTCATTTCAGCAGCATGGGCTAGGGAAAGCAGCCGGGGGAATCATAACAGACAATCCTACAAGCTCGGAT
ATATTCGCCGCAGCTTCCATGCTCTACCACAGTGGTCTGAACGGATCGGAGTTAGGATCCACGTTAGCACAACAG
GCTTTCGCGGGACAGTCTCTCCCCACCCATGGGATACAACGAAAAATTAATTCACATACTGGCAGTGTCGCACAG
GGTTCAGCTTCATCTCCACCCCGGGCTGGTGTCCCGGTTGGATATCATACCTCGGAGATGTTTTTTGACGTCCGT
GACCCCATTCCTGCGGACCAACATCCATCAAGAAAGGCCCGCAGTTTGCGATGGGGCTCAGATGCCAGTTTTATG
GACCAGGGCTATCTTCGCCCCCCTGATCAGCCTGACGAGGAACAGCGGACAAGTGACCTGCTCGATCATCTCGGG
TGCTTTGAACCACAAAGCAGTGCAGCAAACACACGAGCACCTAGTCCAGAGCGCATGGTTGGGGCTCCTCCTCAA
GGTGCCGTTTTCCGAAGTGGAGCTGTCCTGGACGAGAGCTTACATCCCCGAAAACGGCCAAGAACCGCCCTGAAA
TATGAGGGTGACGAAGACTCCGATGAGGATGATGCACGACCTCACTCAAGAAAGTCTAGAGGATCTATCAGCCAA
GGCCGACGAGCATCAACGGACATGTCTCGAAAAGCCCGAGTACAGCCAGGGTCCAAAACTGCGCGAGAGAATCTC
ACTGAAGAGCAAAAACGGACCAACCATATCCTTTCGGAGCAGAAACGTCGAAATCTTATTCGCCAAGGCTTCGAA
GACTTGTGTACACTGGTCCCTGCGCTTAGAGGTGGCGGATTCAGCAAAAGCGCAATGCTCACTGGAGCTGCTGAC
TGGCTTGAAGACCTTCTCCGGGGGAATGACATACTTCAAAGCCAACTGCGCGAATTGAAGGGCATGAATGGCTTA
GTGATGCCGCGTTGA
Transcript >Pro_DTO377G3_2|g9600.t1
ATGAATGGACATGGCACTCAAGTTCGGACTGGGCGCACGTCTCCCCCGGCTGCTCCCTTTGGATACTCGTTTCTC
TCCCCCATGGACACACCCTTTGAACAGGCACCTGCTCTACCCCCGGGACCTTCTCTTCTTGACGATAACGAATCC
AATATGCTTGATAACTTCTTTACTACCATGAACGCAAACCACTTTACGAATGATTTCTGGATGCGACAAGAACAT
AAATCCGGGACACCCAACTTTGACTGGTCAGGTGAGCTGCCGCCCAACTTCGAAGGATCAACCACATCCCTATCG
CAGCCCTCATTTCAGCAGCATGGGCTAGGGAAAGCAGCCGGGGGAATCATAACAGACAATCCTACAAGCTCGGAT
ATATTCGCCGCAGCTTCCATGCTCTACCACAGTGGTCTGAACGGATCGGAGTTAGGATCCACGTTAGCACAACAG
GCTTTCGCGGGACAGTCTCTCCCCACCCATGGGATACAACGAAAAATTAATTCACATACTGGCAGTGTCGCACAG
GGTTCAGCTTCATCTCCACCCCGGGCTGGTGTCCCGGTTGGATATCATACCTCGGAGATGTTTTTTGACGTCCGT
GACCCCATTCCTGCGGACCAACATCCATCAAGAAAGGCCCGCAGTTTGCGATGGGGCTCAGATGCCAGTTTTATG
GACCAGGGCTATCTTCGCCCCCCTGATCAGCCTGACGAGGAACAGCGGACAAGTGACCTGCTCGATCATCTCGGG
TGCTTTGAACCACAAAGCAGTGCAGCAAACACACGAGCACCTAGTCCAGAGCGCATGGTTGGGGCTCCTCCTCAA
GGTGCCGTTTTCCGAAGTGGAGCTGTCCTGGACGAGAGCTTACATCCCCGAAAACGGCCAAGAACCGCCCTGAAA
TATGAGGGTGACGAAGACTCCGATGAGGATGATGCACGACCTCACTCAAGAAAGTCTAGAGGATCTATCAGCCAA
GGCCGACGAGCATCAACGGACATGTCTCGAAAAGCCCGAGTACAGCCAGGGTCCAAAACTGCGCGAGAGAATCTC
ACTGAAGAGCAAAAACGGACCAACCATATCCTTTCGGAGCAGAAACGTCGAAATCTTATTCGCCAAGGCTTCGAA
GACTTGTGTACACTGGTCCCTGCGCTTAGAGGTGGCGGATTCAGCAAAAGCGCAATGCTCACTGGAGCTGCTGAC
TGGCTTGAAGACCTTCTCCGGGGGAATGACATACTTCAAAGCCAACTGCGCGAATTGAAGGGCATGAATGGCTTA
GTGATGCCGCGTTGA
Gene >Pro_DTO377G3_2|g9600.t1
ATGAATGGACATGGCACTCAAGTTCGGACTGGGCGCACGTCTCCCCCGGCTGCTCCCTTTGGATGTGAGTCGCTC
CGGGCATTATTTGTACCGTCCACTCTTTAACCCGATTCCAGACTCGTTTCTCTCCCCCATGGACACACCCTTTGA
ACAGGCACCTGCTCTACCCCCGGGACCTTCTCTTCTTGACGATAACGAATCCAATATGCTTGATAACTTCTTTAC
TACCATGAACGCAAACCACTTTACGAATGATTTCTGGATGCGACAAGAACATAAATCCGGGACACCCAACTTTGA
CTGGTCAGGTGAGCTGCCGCCCAACTTCGAAGGATCAACCACATCCCTATCGCAGCCCTCATTTCAGCAGCATGG
GCTAGGGAAAGCAGCCGGGGGAATCATAACAGACAATCCTACAAGCTCGGATATATTCGCCGCAGCTTCCATGCT
CTACCACAGTGGTCTGAACGGATCGGAGTTAGGATCCACGTTAGCACAACAGGCTTTCGCGGGACAGTCTCTCCC
CACCCATGGGATACAACGAAAAATTAATTCACATACTGGCAGTGTCGCACAGGGTTCAGCTTCATCTCCACCCCG
GGCTGGTGTCCCGGTTGGATATCATACCTCGGAGATGTTTTTTGACGTCCGTGACCCCATTCCTGCGGACCAACA
TCCATCAAGAAAGGCCCGCAGTTTGCGATGGGGCTCAGATGCCAGTTTTATGGACCAGGGCTATCTTCGCCCCCC
TGATCAGCCTGACGAGGAACAGCGGACAAGTGACCTGCTCGATCATCTCGGGTGCTTTGAACCACAAAGCAGTGC
AGCAAACACACGAGCACCTAGTCCAGAGCGCATGGTTGGGGCTCCTCCTCAAGGTGCCGTTTTCCGAAGTGGAGC
TGTCCTGGACGAGAGCTTACATCCCCGAAAACGGCCAAGAACCGCCCTGAAATATGAGGGTGACGAAGACTCCGA
TGAGGATGATGCACGACCTCACTCAAGAAAGTCTAGAGGATCTATCAGCCAAGGCCGACGAGCATCAACGGACAT
GTCTCGAAAAGCCCGAGTACAGCCAGGGTCCAAAACTGCGCGAGAGAATCTCACTGAAGAGCAAAAACGGACCAA
CCATATCCTTTCGGAGCAGAAACGTCGAAATCTTATTCGCCAAGGCTTCGAAGACTTGTGTACACTGGTCCCTGC
GCTTAGAGGTGGCGGATTCAGCAAAAGCGCAATGCTCACTGGAGCTGCTGACTGGCTTGAAGACCTTCTCCGGGG
GAATGACATACTTCAAAGCCAACTGCGCGAATTGAAGGGCATGAATGGCTTAGTGATGCCGCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail