Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g9592.t1
Gene name
Location	scaffold_52:41701..42695
Strand	-
Gene length (bp)	994
Transcript length (bp)	690
Coding sequence length (bp)	690
Protein length (aa)	230

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00213	OSCP	ATP synthase delta (OSCP) subunit	1.6E-43	46	225

GO

GO Term	Description	Terminal node
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	Yes
GO:0015986	proton motive force-driven ATP synthesis	Yes
GO:0009152	purine ribonucleotide biosynthetic process	No
GO:0006754	ATP biosynthetic process	No
GO:0090407	organophosphate biosynthetic process	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0009144	purine nucleoside triphosphate metabolic process	No
GO:0009205	purine ribonucleoside triphosphate metabolic process	No
GO:0008152	metabolic process	No
GO:0006793	phosphorus metabolic process	No
GO:0006796	phosphate-containing compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0046390	ribose phosphate biosynthetic process	No
GO:0015078	proton transmembrane transporter activity	No
GO:0055086	nucleobase-containing small molecule metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0008324	cation transmembrane transporter activity	No
GO:0009058	biosynthetic process	No
GO:0046483	heterocycle metabolic process	No
GO:0003674	molecular_function	No
GO:0006163	purine nucleotide metabolic process	No
GO:0009117	nucleotide metabolic process	No
GO:0003824	catalytic activity	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0006753	nucleoside phosphate metabolic process	No
GO:0019693	ribose phosphate metabolic process	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0072522	purine-containing compound biosynthetic process	No
GO:0009201	ribonucleoside triphosphate biosynthetic process	No
GO:0022857	transmembrane transporter activity	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008150	biological_process	No
GO:0009199	ribonucleoside triphosphate metabolic process	No
GO:0009145	purine nucleoside triphosphate biosynthetic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0022890	inorganic cation transmembrane transporter activity	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0015318	inorganic molecular entity transmembrane transporter activity	No
GO:0005215	transporter activity	No
GO:1901137	carbohydrate derivative biosynthetic process	No
GO:0009141	nucleoside triphosphate metabolic process	No
GO:1901135	carbohydrate derivative metabolic process	No
GO:0006164	purine nucleotide biosynthetic process	No
GO:1901293	nucleoside phosphate biosynthetic process	No
GO:0044237	cellular metabolic process	No
GO:0018130	heterocycle biosynthetic process	No
GO:0046034	ATP metabolic process	No
GO:0009987	cellular process	No
GO:1901576	organic substance biosynthetic process	No
GO:0022803	passive transmembrane transporter activity	No
GO:0044238	primary metabolic process	No
GO:0072521	purine-containing compound metabolic process	No
GO:0009206	purine ribonucleoside triphosphate biosynthetic process	No
GO:0044249	cellular biosynthetic process	No
GO:0009260	ribonucleotide biosynthetic process	No
GO:0009150	purine ribonucleotide metabolic process	No
GO:0009165	nucleotide biosynthetic process	No
GO:0009259	ribonucleotide metabolic process	No
GO:0015267	channel activity	No
GO:0044281	small molecule metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0016874	ligase activity	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0015252	proton channel activity	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0005216	ion channel activity	No
GO:0009142	nucleoside triphosphate biosynthetic process	No
GO:0019637	organophosphate metabolic process	No
GO:0005261	cation channel activity	No
GO:0015075	ion transmembrane transporter activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	569.08	342.91	795.26
5d_25C	Five days - 25 degrees Celsius	419.73	254.32	585.15
7d_25C	Seven days - 25 degrees Celsius	384.28	233.21	535.35
10d_25C	Ten days - 25 degrees Celsius	323.11	196.84	449.38
7d_15C	Seven days - 15 degrees Celsius	458.32	273.44	643.20
7d_30C	Seven days - 30 degrees Celsius	330.22	201.80	458.64

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.171349	no
3d_25C	7d_25C	0.059534	no
3d_25C	7d_15C	0.388708	no
3d_25C	7d_30C	0.006000	yes
3d_25C	10d_25C	0.004045	yes
5d_25C	7d_25C	0.760785	no
5d_25C	7d_15C	0.769758	no
5d_25C	7d_30C	0.302361	no
5d_25C	10d_25C	0.256842	no
7d_25C	7d_15C	0.501100	no
7d_25C	7d_30C	0.557653	no
7d_25C	10d_25C	0.499110	no
7d_15C	7d_30C	0.152656	no
7d_15C	10d_25C	0.126596	no
7d_30C	10d_25C	0.951508	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g9592.t1 MISARFARAGLRATQFSVPRTAAVNGIRTYATPAQDTRAPVALFGVDGTYASALYTASAKSAALDQTARAIANLG ETLKGDKKLVGILSSPMLTDEDKKAIVEELFKVAGADKADKAGVVKNFLQTLSEHNRFSSLEGVCEKFATLMGAY HGEIDLHITSAQELDAKTINRLEKAISKSQFSQGKKLKVITKVNPDIVGGLIVEIADRTVDLSVSSKIAKMNKAL SDAV*
Coding	>Pro_DTO377G3_2\|g9592.t1 ATGATCTCCGCTCGCTTCGCCCGCGCTGGCCTGCGTGCCACCCAGTTCTCGGTTCCTCGCACCGCCGCCGTTAAC GGAATCAGGACCTATGCCACCCCGGCCCAGGATACCCGCGCCCCCGTCGCCCTGTTCGGCGTTGATGGCACTTAC GCCTCTGCTCTGTACACCGCTTCCGCCAAGTCCGCTGCTCTCGACCAGACTGCCCGTGCTATCGCCAACCTCGGC GAGACCCTCAAGGGTGACAAGAAGCTCGTCGGCATCCTCAGCTCCCCTATGCTCACCGACGAGGACAAGAAGGCC ATCGTGGAGGAGCTCTTCAAGGTCGCCGGTGCTGACAAGGCCGACAAGGCCGGTGTCGTCAAGAACTTCCTCCAG ACTCTCTCCGAGCACAACCGTTTCAGCTCCCTCGAGGGTGTCTGCGAGAAGTTCGCTACCCTGATGGGCGCTTAC CACGGCGAGATCGACCTCCACATCACCAGTGCTCAGGAGCTCGATGCCAAGACCATTAACCGTCTTGAGAAGGCC ATTTCCAAGTCTCAGTTCAGCCAGGGCAAGAAGCTCAAGGTTATTACCAAGGTCAACCCTGACATCGTTGGTGGA CTCATCGTTGAGATTGCCGACCGCACCGTCGACCTTAGCGTTTCTTCTAAGATCGCCAAGATGAACAAGGCTCTT TCCGATGCTGTGTAA
Transcript	>Pro_DTO377G3_2\|g9592.t1 ATGATCTCCGCTCGCTTCGCCCGCGCTGGCCTGCGTGCCACCCAGTTCTCGGTTCCTCGCACCGCCGCCGTTAAC GGAATCAGGACCTATGCCACCCCGGCCCAGGATACCCGCGCCCCCGTCGCCCTGTTCGGCGTTGATGGCACTTAC GCCTCTGCTCTGTACACCGCTTCCGCCAAGTCCGCTGCTCTCGACCAGACTGCCCGTGCTATCGCCAACCTCGGC GAGACCCTCAAGGGTGACAAGAAGCTCGTCGGCATCCTCAGCTCCCCTATGCTCACCGACGAGGACAAGAAGGCC ATCGTGGAGGAGCTCTTCAAGGTCGCCGGTGCTGACAAGGCCGACAAGGCCGGTGTCGTCAAGAACTTCCTCCAG ACTCTCTCCGAGCACAACCGTTTCAGCTCCCTCGAGGGTGTCTGCGAGAAGTTCGCTACCCTGATGGGCGCTTAC CACGGCGAGATCGACCTCCACATCACCAGTGCTCAGGAGCTCGATGCCAAGACCATTAACCGTCTTGAGAAGGCC ATTTCCAAGTCTCAGTTCAGCCAGGGCAAGAAGCTCAAGGTTATTACCAAGGTCAACCCTGACATCGTTGGTGGA CTCATCGTTGAGATTGCCGACCGCACCGTCGACCTTAGCGTTTCTTCTAAGATCGCCAAGATGAACAAGGCTCTT TCCGATGCTGTGTAA
Gene	>Pro_DTO377G3_2\|g9592.t1 ATGATCTCCGCTCGCTTCGCCCGCGCTGGCCTGCGTGCCACCCAGTTCTCGGTTCCTCGCACCGCCGCCGTTAAC GGAATCAGGACCTATGCCACCCCGGCCCAGGATACCCGCGCCCCCGTCGCCCTGTTCGGCGTTGATGGCACTTAC GCCTCTGCTCTGGTATGCACCTCCATCGCCTCGGTCTTGTCGCGACCGTGTGCTTCGCCTTTTCGCGACGAACAC CCCGTCTTTCCCCGACCCCTCCCACACTCTTCAAAGCAGTGTTCAGATCCTCATCAAAACACTGCAAGCAAAAAC CCGGAATGAATTACCCTTCTAACCATCCTCGTGAATAGTACACCGCTTCCGCCAAGTCCGCTGCTCTCGACCAGA CTGCCCGTGCTATCGCCAACCTCGGCGAGACCCTCAAGGGTGACAAGAAGCTCGTCGGCATCCTCAGCTCCCCTA TGCTCACCGACGAGGACAAGAAGGCCATCGTGGAGGAGCTCTTCAAGGTCGCCGGTGCTGACAAGGCCGACAAGG CCGGTGTCGTCAAGAACTTCCTCCAGACTCTCTCCGAGCACAACCGTTTCAGCTCCCTCGAGGGTGTCTGCGAGA AGTTCGCTACCCTGATGGGCGCTTACCACGGCGAGATCGACCTCCACATCACCAGTGCTCAGGTACGTACTCCAT GAGCTGTGTTTCACTCGCAGAAAAAAAAATAAGGATATAAGCTAAAAGTTTGTCCGCAGGAGCTCGATGCCAAGA CCATTAACCGTCTTGAGAAGGCCATTTCCAAGTCTCAGTTCAGCCAGGGCAAGAAGCTCAAGGTTATTACCAAGG TTCGTTACAATCGATGGAATTTTTTTTTGTAGCTATTTACTAACTCATTGACCAGGTCAACCCTGACATCGTTGG TGGACTCATCGTTGAGATTGCCGACCGCACCGTCGACCTTAGCGTTTCTTCTAAGATCGCCAAGATGAACAAGGC TCTTTCCGATGCTGTGTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences