Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9587.t1
Gene name
Locationscaffold_52:28145..29294
Strand-
Gene length (bp)1149
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00682 HMGL-like HMGL-like 6.7E-48 34 329

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9587.t1
MTITRPRLSLFSALRSPYSARRFSTESRLTSDHVRIVEVGARDGLQNEKKTISMQTKLELIERLAKTGVTTIEAG
SFVPAKWVPQMASTAEICEHLLTKPPQAQSTIAYNYLVPNIRGLENLVKILDDTGVSADATGETSKSATTTEVSL
FAAATEAFSKANTNCSITESLERIKPIVALARSKNIRVRGYVSVALGCPYEGPDVDPVKVADITATLLEMGADEV
SVADTTGMGTAPRTMELMQALKAAGIANTDLALHFHDTYGQALVNTIVGLEHGVRIFDSSVAGLGGCPYSKGATG
NVATEDLVHTIHSLGMHTGVSLDEMSKIGGWISEELGRANGSRAGKATLARLATEKASL*
Coding >Pro_DTO377G3_2|g9587.t1
ATGACGATAACCCGCCCCAGGTTGAGTCTTTTCTCTGCCCTACGATCTCCATACTCTGCACGCCGCTTCTCGACC
GAGTCGCGCTTAACATCGGACCATGTCCGCATCGTGGAGGTTGGCGCTCGGGATGGACTGCAGAATGAGAAAAAA
ACAATTTCAATGCAAACAAAGCTTGAGTTAATCGAGCGACTGGCTAAGACAGGTGTCACCACCATTGAAGCTGGC
TCATTTGTGCCCGCAAAATGGGTACCCCAGATGGCTAGCACAGCTGAGATTTGTGAGCACCTCCTTACAAAACCG
CCTCAAGCACAATCTACAATTGCATACAATTATCTTGTCCCCAACATCAGAGGACTGGAGAACCTGGTCAAGATC
CTGGATGACACAGGAGTCTCCGCGGACGCGACTGGGGAGACCTCAAAGTCAGCGACGACTACAGAGGTGTCTCTT
TTTGCTGCAGCAACGGAAGCTTTCTCTAAAGCTAACACCAACTGCTCCATTACCGAGTCACTGGAGCGCATCAAG
CCGATTGTCGCATTGGCAAGGAGCAAGAATATCCGGGTACGCGGATATGTCTCTGTTGCACTAGGATGCCCATAT
GAAGGCCCCGATGTGGATCCTGTCAAGGTGGCTGATATTACCGCCACCCTACTGGAGATGGGAGCGGATGAGGTC
TCAGTGGCGGACACAACGGGTATGGGCACCGCTCCTCGGACCATGGAGCTCATGCAAGCCCTCAAGGCTGCTGGC
ATCGCTAACACAGACTTGGCGTTGCACTTCCATGATACCTATGGACAGGCTTTGGTGAACACAATCGTCGGCCTG
GAGCATGGTGTCCGCATTTTCGACAGCAGTGTGGCTGGGCTTGGTGGTTGCCCGTATTCTAAGGGCGCGACAGGG
AATGTGGCGACGGAGGACCTTGTGCACACGATTCACAGCCTGGGAATGCATACCGGGGTCAGCTTAGATGAGATG
TCGAAAATCGGAGGTTGGATTAGTGAGGAGCTGGGCCGAGCTAATGGCAGCAGGGCTGGAAAAGCGACTCTCGCC
CGTCTCGCAACAGAAAAAGCGTCACTTTGA
Transcript >Pro_DTO377G3_2|g9587.t1
ATGACGATAACCCGCCCCAGGTTGAGTCTTTTCTCTGCCCTACGATCTCCATACTCTGCACGCCGCTTCTCGACC
GAGTCGCGCTTAACATCGGACCATGTCCGCATCGTGGAGGTTGGCGCTCGGGATGGACTGCAGAATGAGAAAAAA
ACAATTTCAATGCAAACAAAGCTTGAGTTAATCGAGCGACTGGCTAAGACAGGTGTCACCACCATTGAAGCTGGC
TCATTTGTGCCCGCAAAATGGGTACCCCAGATGGCTAGCACAGCTGAGATTTGTGAGCACCTCCTTACAAAACCG
CCTCAAGCACAATCTACAATTGCATACAATTATCTTGTCCCCAACATCAGAGGACTGGAGAACCTGGTCAAGATC
CTGGATGACACAGGAGTCTCCGCGGACGCGACTGGGGAGACCTCAAAGTCAGCGACGACTACAGAGGTGTCTCTT
TTTGCTGCAGCAACGGAAGCTTTCTCTAAAGCTAACACCAACTGCTCCATTACCGAGTCACTGGAGCGCATCAAG
CCGATTGTCGCATTGGCAAGGAGCAAGAATATCCGGGTACGCGGATATGTCTCTGTTGCACTAGGATGCCCATAT
GAAGGCCCCGATGTGGATCCTGTCAAGGTGGCTGATATTACCGCCACCCTACTGGAGATGGGAGCGGATGAGGTC
TCAGTGGCGGACACAACGGGTATGGGCACCGCTCCTCGGACCATGGAGCTCATGCAAGCCCTCAAGGCTGCTGGC
ATCGCTAACACAGACTTGGCGTTGCACTTCCATGATACCTATGGACAGGCTTTGGTGAACACAATCGTCGGCCTG
GAGCATGGTGTCCGCATTTTCGACAGCAGTGTGGCTGGGCTTGGTGGTTGCCCGTATTCTAAGGGCGCGACAGGG
AATGTGGCGACGGAGGACCTTGTGCACACGATTCACAGCCTGGGAATGCATACCGGGGTCAGCTTAGATGAGATG
TCGAAAATCGGAGGTTGGATTAGTGAGGAGCTGGGCCGAGCTAATGGCAGCAGGGCTGGAAAAGCGACTCTCGCC
CGTCTCGCAACAGAAAAAGCGTCACTTTGA
Gene >Pro_DTO377G3_2|g9587.t1
ATGACGATAACCCGCCCCAGGTTGAGTCTTTTCTCTGCCCTACGATCTCCATACTCTGCACGCCGCTTCTCGACC
GAGTCGCGCTTAACATCGGACCATGTCCGCATCGTGGAGGTTGGCGCTCGGGATGGACTGCAGAATGAGAAAAAA
ACAATTTCAATGCAAACAAAGCTTGAGTTAATCGAGCGACTGGCTAAGACAGGTGTCACCACCATTGAAGCTGGC
TCATTTGTGCCCGCAAAATGGGTACCCCAGGTATGACCTCAGCGGAGCATCATCGTGCCATTCCAGACGATAAAA
ACCGATTTGCTTACGTTACGACAGATGGCTAGCACAGCTGAGATTTGTGAGCACCTCCTTACAAAACCGCCTCAA
GCACAATCTACAATTGCATACAATTATCTTGTCCCCAACATCAGAGGACTGGAGAACCTGGTCAAGATCCTGGAT
GACACAGGAGTCTCCGCGGACGCGACTGGGGAGACCTCAAAGTCAGCGACGACTACAGAGGTGTCTCTTTTTGCT
GCAGCAACGGAAGCTTTCTCTAAAGCTAACACCAACTGCTCCATTACCGAGTCACTGGAGCGCATCAAGCCGATT
GTCGCATTGGCAAGGAGCAAGAATATCCGGGTACGCGGATATGTCTCTGTTGCACTAGGATGCCCATATGAAGGC
CCCGATGTGGATCCTGTCAAGGTGGCTGATATTACCGCCACCCTACTGGAGATGGGAGCGGATGAGGTCTCAGTG
GCGGACACAACGGGTATGGGCACCGCTCCTCGGACCATGGAGCTCATGCAAGCCCTCAAGGCTGCTGGCATCGCT
AACACAGACTTGGCGTTGCACTTCCATGATACCTATGGACAGGCTTTGGTGAACACAATCGTCGGCCTGGAGCAT
GGTGTCCGCATTTTCGACAGCAGTGTGGCTGGGCTTGGTGGTTGCCCGTATTCTAAGGGCGCGACAGGGAATGTG
GCGACGGAGGACCTTGTGCACACGATTCACAGCCTGGGAATGCATACCGGGGTCAGCTTAGATGAGATGTCGAAA
ATCGGAGGTTGGATTAGTGAGGAGCTGGGCCGAGCTAATGGCAGCAGGGCTGGAAAAGCGACTCTCGCCCGTCTC
GCAACAGAAAAAGCGTCACTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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