Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9584.t1
Gene name
Locationscaffold_52:23804..25307
Strand-
Gene length (bp)1503
Transcript length (bp)1389
Coding sequence length (bp)1389
Protein length (aa) 463

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02487 CLN3 CLN3 protein 8.2E-162 43 449

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

Domain # Start End Length
1 43 65 22
2 75 97 22
3 102 124 22
4 134 156 22
5 163 185 22
6 190 212 22
7 288 307 19
8 327 344 17
9 357 376 19
10 380 402 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9584.t1
MPLPVSDEDAATLPPQEQSSPFWKRLSARLSGAFSGADPRVCVAFWLFGLINNVLYVIILSAAVDLVGPDVPKGV
VLLADVIPSFATKLVAPYFIHLVPYSIRVLVFAFLSTVGMLVVAMSPGYTDGGTISSKIAGIILASLSCGAGELS
FVGLTHFYGPFSLAAWGSGTGAAGLVGAGAYAVATSALGFSVHVTLLVSACLPAIMGLSFFVVLPRSPLRSAESD
ADSYRAVEGGGPVEEDEVDDGAGGEDEGLLGVSHNSPAHKSIHVNQGGSWQDQTRMNLRRIKGLFIPFMIPMLLV
YIAEYVINQGVAPTLLFPLRESPFDHFRSFYPTYNAIYQVGVFISRSSTPFFRIHKLYLPSLLQVVNLVLLTLHA
MFDFIPTVWLVFIIVFWEGLLGGVVYVNTFAEIAERVPKEDREFSLGATTVSDSGGICIAGFLSMGWEVWLCSWQ
VSHGRDYCRRKM*
Coding >Pro_DTO377G3_2|g9584.t1
ATGCCTCTCCCTGTGTCCGATGAGGATGCCGCAACGCTTCCACCCCAAGAGCAATCATCTCCCTTCTGGAAACGT
TTGAGCGCCCGTCTTAGTGGTGCCTTCAGCGGTGCAGACCCTCGAGTCTGTGTTGCTTTCTGGCTCTTCGGCCTT
ATCAACAATGTCCTATATGTGATCATCCTCTCCGCAGCTGTAGATTTAGTCGGACCCGATGTACCTAAAGGCGTC
GTTCTCCTCGCAGACGTGATCCCGTCATTTGCGACCAAACTCGTCGCCCCATACTTCATCCACCTGGTCCCATAT
TCGATCCGCGTCCTCGTCTTCGCCTTCCTGTCAACTGTGGGCATGCTGGTCGTGGCTATGAGCCCAGGCTATACC
GATGGGGGAACGATATCGTCCAAGATTGCTGGAATCATCCTGGCTAGCCTTTCTTGCGGTGCTGGGGAGCTGAGC
TTTGTGGGTCTCACGCACTTTTATGGCCCGTTCAGCCTGGCGGCGTGGGGGAGTGGCACTGGTGCCGCTGGGCTG
GTCGGGGCTGGTGCTTATGCCGTTGCAACTTCGGCGCTGGGTTTCTCCGTTCATGTCACATTGTTGGTTTCGGCC
TGCTTACCAGCCATCATGGGTTTGAGCTTCTTTGTCGTGCTACCCAGGTCCCCCCTAAGATCTGCTGAATCCGAC
GCTGATAGTTATCGCGCCGTTGAGGGTGGGGGCCCGGTGGAGGAAGATGAAGTGGACGATGGCGCTGGTGGAGAA
GACGAGGGGCTCTTGGGAGTGTCGCACAACTCCCCCGCCCACAAGTCCATCCATGTCAATCAAGGTGGTTCCTGG
CAGGACCAGACACGCATGAATCTACGTCGTATCAAGGGACTGTTCATTCCCTTCATGATCCCGATGCTACTGGTA
TATATCGCCGAGTACGTGATCAACCAAGGTGTGGCTCCAACTCTGCTATTTCCTCTGCGTGAATCGCCCTTCGAC
CACTTCCGCTCGTTCTACCCCACCTATAATGCCATATACCAAGTTGGCGTCTTCATATCCCGCTCCTCGACCCCA
TTCTTCCGCATCCACAAGTTGTACCTGCCATCACTCCTGCAGGTGGTCAACCTTGTGTTGCTAACCCTCCATGCT
ATGTTTGATTTTATCCCCACTGTATGGCTTGTGTTTATCATTGTTTTCTGGGAGGGCCTTCTCGGTGGTGTGGTA
TATGTCAATACCTTTGCTGAGATTGCCGAACGTGTGCCTAAGGAGGACCGTGAATTCTCATTAGGAGCTACCACT
GTCAGCGACTCCGGCGGTATCTGCATTGCGGGCTTTCTCAGTATGGGATGGGAGGTCTGGTTGTGCAGTTGGCAG
GTTAGCCACGGGCGTGATTATTGCCGACGAAAGATGTAG
Transcript >Pro_DTO377G3_2|g9584.t1
ATGCCTCTCCCTGTGTCCGATGAGGATGCCGCAACGCTTCCACCCCAAGAGCAATCATCTCCCTTCTGGAAACGT
TTGAGCGCCCGTCTTAGTGGTGCCTTCAGCGGTGCAGACCCTCGAGTCTGTGTTGCTTTCTGGCTCTTCGGCCTT
ATCAACAATGTCCTATATGTGATCATCCTCTCCGCAGCTGTAGATTTAGTCGGACCCGATGTACCTAAAGGCGTC
GTTCTCCTCGCAGACGTGATCCCGTCATTTGCGACCAAACTCGTCGCCCCATACTTCATCCACCTGGTCCCATAT
TCGATCCGCGTCCTCGTCTTCGCCTTCCTGTCAACTGTGGGCATGCTGGTCGTGGCTATGAGCCCAGGCTATACC
GATGGGGGAACGATATCGTCCAAGATTGCTGGAATCATCCTGGCTAGCCTTTCTTGCGGTGCTGGGGAGCTGAGC
TTTGTGGGTCTCACGCACTTTTATGGCCCGTTCAGCCTGGCGGCGTGGGGGAGTGGCACTGGTGCCGCTGGGCTG
GTCGGGGCTGGTGCTTATGCCGTTGCAACTTCGGCGCTGGGTTTCTCCGTTCATGTCACATTGTTGGTTTCGGCC
TGCTTACCAGCCATCATGGGTTTGAGCTTCTTTGTCGTGCTACCCAGGTCCCCCCTAAGATCTGCTGAATCCGAC
GCTGATAGTTATCGCGCCGTTGAGGGTGGGGGCCCGGTGGAGGAAGATGAAGTGGACGATGGCGCTGGTGGAGAA
GACGAGGGGCTCTTGGGAGTGTCGCACAACTCCCCCGCCCACAAGTCCATCCATGTCAATCAAGGTGGTTCCTGG
CAGGACCAGACACGCATGAATCTACGTCGTATCAAGGGACTGTTCATTCCCTTCATGATCCCGATGCTACTGGTA
TATATCGCCGAGTACGTGATCAACCAAGGTGTGGCTCCAACTCTGCTATTTCCTCTGCGTGAATCGCCCTTCGAC
CACTTCCGCTCGTTCTACCCCACCTATAATGCCATATACCAAGTTGGCGTCTTCATATCCCGCTCCTCGACCCCA
TTCTTCCGCATCCACAAGTTGTACCTGCCATCACTCCTGCAGGTGGTCAACCTTGTGTTGCTAACCCTCCATGCT
ATGTTTGATTTTATCCCCACTGTATGGCTTGTGTTTATCATTGTTTTCTGGGAGGGCCTTCTCGGTGGTGTGGTA
TATGTCAATACCTTTGCTGAGATTGCCGAACGTGTGCCTAAGGAGGACCGTGAATTCTCATTAGGAGCTACCACT
GTCAGCGACTCCGGCGGTATCTGCATTGCGGGCTTTCTCAGTATGGGATGGGAGGTCTGGTTGTGCAGTTGGCAG
GTTAGCCACGGGCGTGATTATTGCCGACGAAAGATGTAG
Gene >Pro_DTO377G3_2|g9584.t1
ATGCCTCTCCCTGTGTCCGATGAGGATGCCGCAACGCTTCCACCCCAAGAGCAATCATCTCCCTTCTGGAAACGT
TTGAGCGCCCGTCTTAGTGGTGCCTTCAGCGGTGCAGACCCTCGAGTCTGTGTTGCTTTCTGGCTCTTCGGTGCG
CACCCTAAACCAGCCCAGTTGATTAGCTCAACTATGAACTAACACCCATACCGGCAGGCCTTATCAACAATGTCC
TATATGTGATCATCCTCTCCGCAGCTGTAGATTTAGTCGGACCCGATGTACCTAAAGGCGTCGTTCTCCTCGCAG
ACGTGATCCCGTCATTTGCGACCAAACTCGTCGCCCCATACTTCATCCACCTGGTCCCATATTCGATCCGCGTCC
TCGTCTTCGCCTTCCTGTCAACTGTGGGCATGCTGGTCGTGGCTATGAGCCCAGGCTATACCGATGGGGGAACGA
TATCGTCCAAGATTGCTGGAATCATCCTGGCTAGCCTTTCTTGCGGTGCTGGGGAGCTGAGCTTTGTGGGTCTCA
CGCACTTTTATGGCCCGTTCAGCCTGGCGGCGTGGGGGAGTGGCACTGGTGCCGCTGGGCTGGTCGGGGCTGGTG
CTTATGCCGTTGCAACTTCGGCGCTGGGTTTCTCCGTTCATGTCACATTGTTGGTTTCGGCCTGCTTACCAGCCA
TCATGGGTTTGAGCTTCTTTGTCGTGCTACCCAGGTCCCCCCTAAGATCTGCTGAATCCGACGCTGATAGTTATC
GCGCCGTTGAGGGTGGGGGCCCGGTGGAGGAAGATGAAGTGGACGATGGCGCTGGTGGAGAAGACGAGGGGCTCT
TGGGAGTGTCGCACAACTCCCCCGCCCACAAGTCCATCCATGTCAATCAAGGTGGTTCCTGGCAGGACCAGACAC
GCATGAATCTACGTCGTATCAAGGGACTGTTCATTCCCTTGTAAGTATCCGGGTCTTTCGATAGTCCCAAATCTA
GGCTAACAGGTATCTAGCATGATCCCGATGCTACTGGTATATATCGCCGAGTACGTGATCAACCAAGGTGTGGCT
CCAACTCTGCTATTTCCTCTGCGTGAATCGCCCTTCGACCACTTCCGCTCGTTCTACCCCACCTATAATGCCATA
TACCAAGTTGGCGTCTTCATATCCCGCTCCTCGACCCCATTCTTCCGCATCCACAAGTTGTACCTGCCATCACTC
CTGCAGGTGGTCAACCTTGTGTTGCTAACCCTCCATGCTATGTTTGATTTTATCCCCACTGTATGGCTTGTGTTT
ATCATTGTTTTCTGGGAGGGCCTTCTCGGTGGTGTGGTATATGTCAATACCTTTGCTGAGATTGCCGAACGTGTG
CCTAAGGAGGACCGTGAATTCTCATTAGGAGCTACCACTGTCAGCGACTCCGGCGGTATCTGCATTGCGGGCTTT
CTCAGTATGGGATGGGAGGTCTGGTTGTGCAGTTGGCAGGTTAGCCACGGGCGTGATTATTGCCGACGAAAGATG
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail