Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9540.t1
Gene name
Locationscaffold_50:61256..62360
Strand+
Gene length (bp)1104
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07470 Glyco_hydro_88 Glycosyl Hydrolase Family 88 3.3E-96 24 364

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9540.t1
MSSPQPTGAQIHNAVNLLIDNLVNIKDETGTFLLPLPDGRIIDTKSWQGWEWTHGIGLYGVWKYYELTGDERLLR
IIEDWFAARFAEGGTTKNINTMAVFLTLAYVYEKTGNVTYLPWLDAWAEWAMHDLPRTRYGGMQHMTYITENYQQ
LWDDTLMMTVMPLAKIGKLLNRPQYIEEAKKQFLTHIKYLFDTKTGLWFHGWTFEDGGHNFADARWARGNSWVTI
VIPEIIELLDLQPNDPIRLHLIDTLEAQCEALQRLQSSSGAWHTLLDHPDSYLEASATAGFAYGILKAVRKRYIG
AQYRPVAEKAISAVMGYVDEKGELQNTSFGTGMGDCLDFYKKIPLTSMPYGQAMAIMALGEALRGLL*
Coding >Pro_DTO377G3_2|g9540.t1
ATGTCGTCCCCTCAGCCTACGGGCGCCCAAATTCACAACGCCGTCAACCTGTTGATTGATAACTTGGTCAATATC
AAAGACGAGACAGGAACATTCCTACTGCCACTTCCTGATGGGCGCATTATCGACACAAAGTCATGGCAGGGTTGG
GAGTGGACACACGGAATTGGACTGTACGGCGTGTGGAAATACTACGAGTTGACGGGCGACGAAAGATTGTTGCGC
ATCATCGAAGACTGGTTTGCTGCACGATTTGCCGAGGGTGGCACTACCAAGAATATCAACACAATGGCTGTGTTT
TTGACTCTCGCCTACGTCTATGAGAAGACCGGCAATGTCACCTACCTGCCGTGGCTCGATGCGTGGGCTGAGTGG
GCGATGCACGATCTCCCCCGCACCCGCTACGGTGGCATGCAGCATATGACTTATATCACAGAGAACTACCAGCAG
CTCTGGGATGATACTTTGATGATGACTGTTATGCCACTCGCGAAGATCGGAAAGCTTCTGAACCGACCCCAATAT
ATCGAAGAGGCGAAAAAGCAATTCCTCACTCACATTAAATATCTTTTCGATACAAAGACTGGTCTCTGGTTTCAC
GGCTGGACTTTTGAGGACGGCGGACACAATTTTGCAGATGCGCGCTGGGCCCGTGGCAACAGCTGGGTCACAATT
GTCATTCCCGAGATCATCGAGCTACTCGACCTCCAACCAAATGACCCTATTCGTCTTCACCTGATAGATACACTC
GAGGCACAGTGTGAGGCCCTTCAGCGTCTTCAGTCGTCATCCGGCGCGTGGCACACTCTCCTTGACCATCCCGAC
TCGTACTTGGAAGCCTCTGCGACCGCTGGCTTTGCCTACGGTATCCTCAAGGCCGTTCGGAAACGTTACATCGGT
GCCCAATACCGCCCCGTGGCTGAGAAGGCTATCAGCGCAGTGATGGGATACGTGGACGAGAAAGGAGAATTGCAG
AATACCAGCTTTGGCACCGGGATGGGTGACTGTCTTGACTTTTATAAGAAGATTCCATTGACCTCAATGCCTTAT
GGCCAGGCTATGGCTATTATGGCTTTGGGCGAAGCGTTGCGTGGTTTGTTGTAA
Transcript >Pro_DTO377G3_2|g9540.t1
ATGTCGTCCCCTCAGCCTACGGGCGCCCAAATTCACAACGCCGTCAACCTGTTGATTGATAACTTGGTCAATATC
AAAGACGAGACAGGAACATTCCTACTGCCACTTCCTGATGGGCGCATTATCGACACAAAGTCATGGCAGGGTTGG
GAGTGGACACACGGAATTGGACTGTACGGCGTGTGGAAATACTACGAGTTGACGGGCGACGAAAGATTGTTGCGC
ATCATCGAAGACTGGTTTGCTGCACGATTTGCCGAGGGTGGCACTACCAAGAATATCAACACAATGGCTGTGTTT
TTGACTCTCGCCTACGTCTATGAGAAGACCGGCAATGTCACCTACCTGCCGTGGCTCGATGCGTGGGCTGAGTGG
GCGATGCACGATCTCCCCCGCACCCGCTACGGTGGCATGCAGCATATGACTTATATCACAGAGAACTACCAGCAG
CTCTGGGATGATACTTTGATGATGACTGTTATGCCACTCGCGAAGATCGGAAAGCTTCTGAACCGACCCCAATAT
ATCGAAGAGGCGAAAAAGCAATTCCTCACTCACATTAAATATCTTTTCGATACAAAGACTGGTCTCTGGTTTCAC
GGCTGGACTTTTGAGGACGGCGGACACAATTTTGCAGATGCGCGCTGGGCCCGTGGCAACAGCTGGGTCACAATT
GTCATTCCCGAGATCATCGAGCTACTCGACCTCCAACCAAATGACCCTATTCGTCTTCACCTGATAGATACACTC
GAGGCACAGTGTGAGGCCCTTCAGCGTCTTCAGTCGTCATCCGGCGCGTGGCACACTCTCCTTGACCATCCCGAC
TCGTACTTGGAAGCCTCTGCGACCGCTGGCTTTGCCTACGGTATCCTCAAGGCCGTTCGGAAACGTTACATCGGT
GCCCAATACCGCCCCGTGGCTGAGAAGGCTATCAGCGCAGTGATGGGATACGTGGACGAGAAAGGAGAATTGCAG
AATACCAGCTTTGGCACCGGGATGGGTGACTGTCTTGACTTTTATAAGAAGATTCCATTGACCTCAATGCCTTAT
GGCCAGGCTATGGCTATTATGGCTTTGGGCGAAGCGTTGCGTGGTTTGTTGTAA
Gene >Pro_DTO377G3_2|g9540.t1
ATGTCGTCCCCTCAGCCTACGGGCGCCCAAATTCACAACGCCGTCAACCTGTTGATTGATAACTTGGTCAATATC
AAAGACGAGACAGGAACATTCCTACTGCCACTTCCTGATGGGCGCATTATCGACACAAAGTCATGGCAGGGTTGG
GAGTGGACACACGGAATTGGACTGTACGGCGTGTGGAAATACTACGAGTTGACGGGCGACGAAAGATTGTTGCGC
ATCATCGAAGACTGGTTTGCTGCACGATTTGCCGAGGGTGGCACTACCAAGAATATCAACACAATGGCTGTGTTT
TTGACTCTCGCCTACGTCTATGAGAAGACCGGCAATGTCACCTACCTGCCGTGGCTCGATGCGTGGGCTGAGTGG
GCGATGCACGATCTCCCCCGCACCCGCTACGGTGGCATGCAGCATATGACTTATATCACAGAGAACTACCAGCAG
CTCTGGGATGATACTTTGATGATGACTGTTATGCCACTCGCGAAGATCGGAAAGCTTCTGAACCGACCCCAATAT
ATCGAAGAGGCGAAAAAGCAATTCCTCACTCACATTAAATATCTTTTCGATACAAAGACTGGTCTCTGGTTTCAC
GGCTGGACTTTTGAGGACGGCGGACACAATTTTGCAGATGCGCGCTGGGCCCGTGGCAACAGCTGGGTCACAATT
GTCATTCCCGAGATCATCGAGCTACTCGACCTCCAACCAAATGACCCTATTCGTCTTCACCTGATAGATACACTC
GAGGCACAGTGTGAGGCCCTTCAGCGTCTTCAGTCGTCATCCGGCGCGTGGCACACTCTCCTTGACCATCCCGAC
TCGTACTTGGAAGCCTCTGCGACCGCTGGCTTTGCCTACGGTATCCTCAAGGCCGTTCGGAAACGTTACATCGGT
GCCCAATACCGCCCCGTGGCTGAGAAGGCTATCAGCGCAGTGATGGGATACGTGGACGAGAAAGGAGAATTGCAG
AATACCAGCTTTGGCACCGGGATGGGTGACTGTCTTGACTTTTATAAGAAGATTCCATTGACCTCAATGCCTTAT
GGCCAGGCTATGGCTATTATGGCTTTGGGCGAAGCGTTGCGTGGTTTGTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail