Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9536.t1
Gene name
Locationscaffold_50:53601..54605
Strand+
Gene length (bp)1004
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01975 SurE Survival protein SurE 4.4E-34 18 213

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9536.t1
MRFDILAILPLAASAVNIISSNDDGWAEVNIRALFESLGAADHSVVVSAPAENQSGKGSMEAEPTVLTEPCEFNS
CPSGSPAVGFNSSEPRLGYVNSYPVTSIQYGINTRAPKFFNGPPDLAVTGPNVGNNIGLTVYFSGTVGAATYAAH
DGIPAIAFSGASGSQTSWESSRPHYSDVYADLATNLTNQVVAAGKPYLPDDVWLNVNFGKVSDECTSPADFSFVL
SRIHIAVPFLTPNDVTTCGKSRLPSEVEVSLASGCYASVSVGIAASKNDADAEMQGIVLKKLGNFLTCLP*
Coding >Pro_DTO377G3_2|g9536.t1
ATGCGGTTCGATATTCTTGCGATACTCCCTCTGGCTGCTAGCGCGGTCAACATCATCTCATCCAATGATGACGGC
TGGGCGGAAGTGAACATCCGCGCTCTATTCGAGTCCCTAGGAGCGGCAGACCATTCAGTTGTGGTATCTGCGCCC
GCTGAGAATCAGAGTGGCAAGGGGTCAATGGAAGCAGAGCCAACTGTCTTGACTGAGCCATGCGAGTTCAATAGC
TGCCCATCTGGCAGCCCGGCCGTGGGATTCAATTCCTCAGAGCCCCGACTGGGTTATGTCAATAGCTACCCGGTG
ACATCAATCCAATATGGCATCAATACGCGTGCCCCTAAATTCTTCAACGGCCCCCCTGACTTGGCTGTCACAGGT
CCAAATGTCGGCAATAACATTGGCCTCACAGTTTACTTCTCCGGAACAGTGGGCGCTGCCACCTACGCTGCGCAT
GATGGAATCCCAGCTATAGCTTTCTCCGGTGCTAGTGGCTCTCAGACTTCGTGGGAAAGCTCGCGGCCTCACTAC
AGTGATGTCTACGCCGATTTGGCAACCAACTTAACTAACCAGGTGGTTGCTGCTGGTAAACCATACCTGCCGGAC
GATGTCTGGCTGAACGTCAATTTCGGAAAGGTTTCCGACGAATGCACAAGCCCGGCCGATTTCTCTTTCGTTCTG
TCCCGCATCCATATCGCAGTCCCATTTCTTACTCCGAATGATGTGACCACGTGTGGCAAATCGAGATTGCCAAGC
GAAGTTGAAGTATCCCTAGCGTCTGGGTGCTATGCAAGTGTCTCAGTGGGGATAGCAGCTTCGAAGAACGATGCC
GACGCTGAGATGCAGGGGATTGTTTTGAAGAAGCTGGGGAATTTCCTGACTTGTCTACCGTGA
Transcript >Pro_DTO377G3_2|g9536.t1
ATGCGGTTCGATATTCTTGCGATACTCCCTCTGGCTGCTAGCGCGGTCAACATCATCTCATCCAATGATGACGGC
TGGGCGGAAGTGAACATCCGCGCTCTATTCGAGTCCCTAGGAGCGGCAGACCATTCAGTTGTGGTATCTGCGCCC
GCTGAGAATCAGAGTGGCAAGGGGTCAATGGAAGCAGAGCCAACTGTCTTGACTGAGCCATGCGAGTTCAATAGC
TGCCCATCTGGCAGCCCGGCCGTGGGATTCAATTCCTCAGAGCCCCGACTGGGTTATGTCAATAGCTACCCGGTG
ACATCAATCCAATATGGCATCAATACGCGTGCCCCTAAATTCTTCAACGGCCCCCCTGACTTGGCTGTCACAGGT
CCAAATGTCGGCAATAACATTGGCCTCACAGTTTACTTCTCCGGAACAGTGGGCGCTGCCACCTACGCTGCGCAT
GATGGAATCCCAGCTATAGCTTTCTCCGGTGCTAGTGGCTCTCAGACTTCGTGGGAAAGCTCGCGGCCTCACTAC
AGTGATGTCTACGCCGATTTGGCAACCAACTTAACTAACCAGGTGGTTGCTGCTGGTAAACCATACCTGCCGGAC
GATGTCTGGCTGAACGTCAATTTCGGAAAGGTTTCCGACGAATGCACAAGCCCGGCCGATTTCTCTTTCGTTCTG
TCCCGCATCCATATCGCAGTCCCATTTCTTACTCCGAATGATGTGACCACGTGTGGCAAATCGAGATTGCCAAGC
GAAGTTGAAGTATCCCTAGCGTCTGGGTGCTATGCAAGTGTCTCAGTGGGGATAGCAGCTTCGAAGAACGATGCC
GACGCTGAGATGCAGGGGATTGTTTTGAAGAAGCTGGGGAATTTCCTGACTTGTCTACCGTGA
Gene >Pro_DTO377G3_2|g9536.t1
ATGCGGTTCGATATTCTTGCGATACTCCCTCTGGCTGCTAGCGCGGTCAACATCATCTCATCCAATGATGACGGC
TGGGCGGAAGTGAACATCCGCGCTCTATTCGAGTCCCTAGGAGCGGCAGACCATTCAGTTGTGGTATCTGCGCCC
GCTGAGAATCAGAGTGGCAAGGGTATGTTATGCCTACCTCTCTACTCCGTACATTCCGCCCTTTTATTGACGCGC
CACTACAGGGTCAATGGAAGCAGAGCCAACTGTCTTGACTGAGCCATGCGAGTTCAATAGCTGCCCATCTGGCAG
CCCGGCCGTGGGATTCAATTCCTCAGAGGTCAGTATCGTCACCGCTGTTACCAGAACGGTAGACTGATCGTATAC
TTGAATAGCCCCGACTGGGTTATGTCAATAGCTACCCGGTGACATCAATCCAATATGGCATCAATACGCGTGCCC
CTAAATTCTTCAACGGCCCCCCTGACTTGGCTGTCACAGGTCCAAATGTCGGCAATAACATTGGCCTCACAGTTT
ACTTCTCCGGAACAGTGGGCGCTGCCACCTACGCTGCGCATGATGGAATCCCAGCTATAGCTTTCTCCGGTGCTA
GTGGCTCTCAGACTTCGTGGGAAAGCTCGCGGCCTCACTACAGTGATGTCTACGCCGATTTGGCAACCAACTTAA
CTAACCAGGTGGTTGCTGCTGGTAAACCATACCTGCCGGACGATGTCTGGCTGAACGTCAATTTCGGAAAGGTTT
CCGACGAATGCACAAGCCCGGCCGATTTCTCTTTCGTTCTGTCCCGCATCCATATCGCAGTCCCATTTCTTACTC
CGAATGATGTGACCACGTGTGGCAAATCGAGATTGCCAAGCGAAGTTGAAGTATCCCTAGCGTCTGGGTGCTATG
CAAGTGTCTCAGTGGGGATAGCAGCTTCGAAGAACGATGCCGACGCTGAGATGCAGGGGATTGTTTTGAAGAAGC
TGGGGAATTTCCTGACTTGTCTACCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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