Protein ID | Pro_DTO377G3_2|g95.t1 |
Gene name | |
Location | scaffold_01:235510..237453 |
Strand | + |
Gene length (bp) | 1943 |
Transcript length (bp) | 1614 |
Coding sequence length (bp) | 1614 |
Protein length (aa) | 538 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06814 | Lung_7-TM_R | Lung seven transmembrane receptor | 1.2E-68 | 146 | 434 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 184 | 206 | 22 |
2 | 218 | 237 | 19 |
3 | 252 | 274 | 22 |
4 | 291 | 313 | 22 |
5 | 323 | 345 | 22 |
6 | 366 | 388 | 22 |
7 | 403 | 425 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g95.t1 MKGWLQTLGLTALLASYALANDAELKSDDAHRQRCSGMYSRKAWGGDVDPFILVKFTKSEAQESDPLASLVIFEW SDEGLIGQYRSGDAEVKETICDASNVEAKICTQEQLGSFVLTSNATDVSKSPIISKAIHLNNPDAVKYPVRKTGF YCVSTYAYSGQDYKAVVTFRNSYGELPAAQIAKLPFYGALTIVYAVIGAFWAFLYVQNRYDILPVQNYITAIVVF LIVEQLMTWGFYEYQNRHGLNGGAKALMVIVAVLNAGRNAFSFFLLLIVCMGYGVVKHSLGRTMIYVRILAIGHF VFAVVYSVASLSITPDSAGPLVLLIVLPLAGTLTAFYVWTLNSLNATMKDLIDRKQKTKAMMYKKLWWCILGSII VIFGFFFINSFAFAGRSDASFVPEHWKARWFVLDGWLNLVYLFDIAFVAYLWRPTVNNRRFAMSDELAQDDDGFE IRSFGSGLDEEDAYDAPPDYPGSSAAEGRDLSPVPPKPFSSAPRHRESLDEETIFAVGEEDAERWSDDEESPRNS SERQRLTGKDKD* |
Coding | >Pro_DTO377G3_2|g95.t1 ATGAAGGGCTGGCTCCAGACATTGGGCTTGACGGCCCTATTGGCAAGCTATGCGCTTGCTAATGACGCTGAACTA AAATCCGATGATGCGCACCGACAACGATGCTCAGGGATGTACAGTCGCAAGGCTTGGGGAGGAGATGTTGATCCC TTCATTTTGGTGAAATTTACCAAGTCGGAAGCTCAGGAAAGTGATCCTTTGGCTAGTTTGGTAATCTTCGAATGG TCCGATGAGGGATTGATTGGCCAATACCGGTCCGGCGATGCTGAGGTCAAGGAAACAATTTGCGATGCCTCCAAT GTTGAGGCAAAAATATGCACTCAAGAACAGCTCGGCTCTTTTGTTCTCACCAGCAATGCCACTGACGTCTCCAAA AGCCCAATCATATCGAAAGCAATCCACCTCAACAACCCCGACGCCGTGAAATACCCTGTCAGAAAGACTGGATTC TACTGCGTTAGCACGTATGCATACTCCGGGCAGGACTACAAAGCAGTGGTTACCTTCCGAAACTCATACGGCGAA CTTCCCGCTGCACAAATCGCAAAGCTTCCATTTTATGGAGCCTTGACGATCGTGTACGCTGTTATTGGAGCATTT TGGGCCTTCCTTTACGTGCAGAACCGTTATGACATTTTGCCCGTCCAAAACTATATCACCGCAATTGTGGTGTTC CTGATCGTCGAGCAGCTGATGACGTGGGGATTCTATGAATACCAAAACCGCCATGGTCTGAATGGCGGCGCAAAG GCCCTTATGGTCATTGTAGCAGTGCTCAATGCGGGCAGAAATGCTTTCTCTTTCTTCCTCCTCCTAATTGTCTGC ATGGGCTACGGCGTGGTCAAGCATTCATTGGGCCGTACCATGATCTATGTTCGCATTTTGGCCATTGGTCACTTT GTGTTCGCGGTCGTCTACTCGGTTGCCAGTCTTTCGATCACCCCTGATAGCGCCGGTCCTCTAGTGCTTCTGATT GTTCTGCCCCTTGCCGGAACCTTGACAGCTTTCTACGTGTGGACCTTGAATTCCCTGAACGCAACGATGAAGGAT CTTATTGACAGAAAGCAAAAGACAAAGGCGATGATGTACAAGAAGCTGTGGTGGTGCATCCTCGGCAGCATCATT GTGATCTTTGGTTTCTTCTTCATCAACTCATTCGCTTTCGCTGGACGCAGTGACGCCAGCTTTGTGCCCGAACAC TGGAAGGCGAGATGGTTCGTTCTTGATGGCTGGTTAAACCTGGTTTACTTGTTCGATATCGCATTTGTGGCTTAT CTGTGGCGACCAACTGTCAACAACCGCCGCTTCGCCATGAGTGATGAGCTTGCTCAAGATGACGATGGATTCGAG ATTCGATCATTCGGCAGTGGTTTGGATGAAGAAGATGCCTATGATGCTCCCCCGGATTATCCTGGCAGCTCAGCC GCCGAGGGCCGTGATCTCTCCCCAGTTCCTCCCAAGCCCTTTTCCTCCGCACCCCGCCATCGCGAGTCGCTCGAC GAAGAGACAATATTCGCAGTCGGCGAAGAGGATGCTGAGAGGTGGTCTGATGATGAAGAGTCTCCTCGCAATTCA AGCGAGAGACAGAGACTCACCGGCAAGGACAAGGATTAA |
Transcript | >Pro_DTO377G3_2|g95.t1 ATGAAGGGCTGGCTCCAGACATTGGGCTTGACGGCCCTATTGGCAAGCTATGCGCTTGCTAATGACGCTGAACTA AAATCCGATGATGCGCACCGACAACGATGCTCAGGGATGTACAGTCGCAAGGCTTGGGGAGGAGATGTTGATCCC TTCATTTTGGTGAAATTTACCAAGTCGGAAGCTCAGGAAAGTGATCCTTTGGCTAGTTTGGTAATCTTCGAATGG TCCGATGAGGGATTGATTGGCCAATACCGGTCCGGCGATGCTGAGGTCAAGGAAACAATTTGCGATGCCTCCAAT GTTGAGGCAAAAATATGCACTCAAGAACAGCTCGGCTCTTTTGTTCTCACCAGCAATGCCACTGACGTCTCCAAA AGCCCAATCATATCGAAAGCAATCCACCTCAACAACCCCGACGCCGTGAAATACCCTGTCAGAAAGACTGGATTC TACTGCGTTAGCACGTATGCATACTCCGGGCAGGACTACAAAGCAGTGGTTACCTTCCGAAACTCATACGGCGAA CTTCCCGCTGCACAAATCGCAAAGCTTCCATTTTATGGAGCCTTGACGATCGTGTACGCTGTTATTGGAGCATTT TGGGCCTTCCTTTACGTGCAGAACCGTTATGACATTTTGCCCGTCCAAAACTATATCACCGCAATTGTGGTGTTC CTGATCGTCGAGCAGCTGATGACGTGGGGATTCTATGAATACCAAAACCGCCATGGTCTGAATGGCGGCGCAAAG GCCCTTATGGTCATTGTAGCAGTGCTCAATGCGGGCAGAAATGCTTTCTCTTTCTTCCTCCTCCTAATTGTCTGC ATGGGCTACGGCGTGGTCAAGCATTCATTGGGCCGTACCATGATCTATGTTCGCATTTTGGCCATTGGTCACTTT GTGTTCGCGGTCGTCTACTCGGTTGCCAGTCTTTCGATCACCCCTGATAGCGCCGGTCCTCTAGTGCTTCTGATT GTTCTGCCCCTTGCCGGAACCTTGACAGCTTTCTACGTGTGGACCTTGAATTCCCTGAACGCAACGATGAAGGAT CTTATTGACAGAAAGCAAAAGACAAAGGCGATGATGTACAAGAAGCTGTGGTGGTGCATCCTCGGCAGCATCATT GTGATCTTTGGTTTCTTCTTCATCAACTCATTCGCTTTCGCTGGACGCAGTGACGCCAGCTTTGTGCCCGAACAC TGGAAGGCGAGATGGTTCGTTCTTGATGGCTGGTTAAACCTGGTTTACTTGTTCGATATCGCATTTGTGGCTTAT CTGTGGCGACCAACTGTCAACAACCGCCGCTTCGCCATGAGTGATGAGCTTGCTCAAGATGACGATGGATTCGAG ATTCGATCATTCGGCAGTGGTTTGGATGAAGAAGATGCCTATGATGCTCCCCCGGATTATCCTGGCAGCTCAGCC GCCGAGGGCCGTGATCTCTCCCCAGTTCCTCCCAAGCCCTTTTCCTCCGCACCCCGCCATCGCGAGTCGCTCGAC GAAGAGACAATATTCGCAGTCGGCGAAGAGGATGCTGAGAGGTGGTCTGATGATGAAGAGTCTCCTCGCAATTCA AGCGAGAGACAGAGACTCACCGGCAAGGACAAGGATTAA |
Gene | >Pro_DTO377G3_2|g95.t1 ATGAAGGGCTGGCTCCAGACATTGGGCTTGACGGCCCTATTGGCAAGCTATGCGCTTGCTAATGACGCTGAACTA GTATGTCCCTGCACTCCACTATGGGAAATTGTCAGGGTCTAACGTTGTTCTGCAGAAATCCGATGATGCGCACCG ACAACGATGCTCAGGGATGTACAGTCGCAAGGCTTGGGGAGGAGATGTTGATCCCTTCATTTTGGTGAAATTTAC CAAGTCGGAAGCTCAGGAAAGTGATCCTTTGGCTAGTTTGGTAATCTTCGAATGGTCCGATGAGGGATTGATTGG CCAATACCGGTCCGGCGATGCTGAGGTATGTCTGTCAACTTCATGGGGACAACCGACGCGGCTAATTATTGGATT TAGGTCAAGGAAACAATTTGCGATGCCTCCAATGTTGAGGCAAAAATATGCACTCAAGAACAGCTCGGCTCTTTT GTTCTCACCAGCAATGCCACTGACGTCTCCAAAAGCCCAATCATATCGAAAGCAATCCACCTCAACAACCCCGAC GCCGTGAAATACCCTGTCAGAAAGACTGGATTCTACTGCGTTAGCACGTATGCATACTCCGGGCAGGACTACAAA GCAGTGGTTACCTTCCGAAACTCATACGGCGAACTTCCCGCTGCACAAATCGCAAAGCTTCCATTTTATGGAGCC TTGACGATCGTGTACGCTGTTATTGGAGCGTATGTAACTTGCAAAATCGACGGACTCGATAGGTTTTGAACTAAA TGCTTACGCGTAACTTTAGATTTTGGGCCTTCCTTTACGTGCAGAACCGTTATGACATTTGTATGTTGGGTTCCC TTCTACCATCCGAGCCATGCTAATACTGGATAGTGCCCGTCCAAAACTATATCACCGCAATTGTGGTGTTCCTGA TCGTCGAGCAGCTGATGACGTGGGGATTCTATGGTAAGAGACAACAATTGATTCCTTGCTTGACTTCTTCTGATT TTTCTAGAATACCAAAACCGCCATGGTCTGAATGGCGGCGCAAAGGCCCTTATGGTCATTGTAGCAGTGCTCAAT GCGGGCAGAAATGCTTTCTCTTTCTTCCTCCTCCTAATTGTCTGCATGGGCTACGGCGTGGTCAAGCATTCATTG GGCCGTACCATGATCTATGTTCGCATTTTGGCCATTGGTCACTTTGTGTTCGCGGTCGTCTACTCGGTTGCCAGT CTTTCGATCACCCCTGATAGCGCCGGTCCTCTAGTGCTTCTGATTGTTCTGCCCCTTGCCGGAACCTTGACAGCT TTCTACGTGTGGACCTTGAATTCCCTGAACGCAACGATGAAGGATCTTATTGACAGAAAGCAAAAGACAAAGGCG ATGATGTACAAGAAGCTGTGGTGGTGCATCCTCGGCAGCATCATTGTGATCTTTGGTTTCTTCTTCATCAACTCA TTCGCTTTCGCTGGACGCAGTGACGCCAGCTTTGTGCCCGAACACTGGAAGGCGAGATGGTTCGTTCTTGATGGC TGGTTAAACCTGGTTTACTTGTTCGATATCGCATTTGTGGCTTATCTGTGGCGACCAACTGTCAACAACCGCCGC TTCGCCATGAGTGATGAGGTATGGAGCTCTTCCCTACATATACAAGAGCAGAATCGAGATGCTAACATCCCTTAC AGCTTGCTCAAGATGACGATGGATTCGAGATTCGATCATTCGGCAGTGGTTTGGATGAAGAAGATGCCTATGATG CTCCCCCGGATTATCCTGGCAGCTCAGCCGCCGAGGGCCGTGATCTCTCCCCAGTTCCTCCCAAGCCCTTTTCCT CCGCACCCCGCCATCGCGAGTCGCTCGACGAAGAGACAATATTCGCAGTCGGCGAAGAGGATGCTGAGAGGTGGT CTGATGATGAAGAGTCTCCTCGCAATTCAAGCGAGAGACAGAGACTCACCGGCAAGGACAAGGATTAA |