Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9484.t1
Gene name
Locationscaffold_49:1141..3550
Strand+
Gene length (bp)2409
Transcript length (bp)1329
Coding sequence length (bp)1329
Protein length (aa) 443

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00890 FAD_binding_2 FAD binding domain 4.9E-26 19 441

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.07 0.0 0.22
5d_25C Five days - 25 degrees Celsius 0.19 0.0 0.55
7d_25C Seven days - 25 degrees Celsius 0.00 0.0 0.00
10d_25C Ten days - 25 degrees Celsius 0.03 0.0 0.14
7d_15C Seven days - 15 degrees Celsius 0.07 0.0 0.23
7d_30C Seven days - 30 degrees Celsius 0.00 0.0 0.00

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 1.0 no
3d_25C 7d_25C 1.0 no
3d_25C 7d_15C 1.0 no
3d_25C 7d_30C 1.0 no
3d_25C 10d_25C 1.0 no
5d_25C 7d_25C 1.0 no
5d_25C 7d_15C 1.0 no
5d_25C 7d_30C 1.0 no
5d_25C 10d_25C 1.0 no
7d_25C 7d_15C 1.0 no
7d_25C 7d_30C 1.0 no
7d_25C 10d_25C 1.0 no
7d_15C 7d_30C 1.0 no
7d_15C 10d_25C 1.0 no
7d_30C 10d_25C 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9484.t1
MSTLSPPATTISDAVTVYDLIVVGSGFAGCMTALNFLEDTKTQGKAAKLALIEAGKDGERCGASRWTPAFFRLDK
NNRFDSGFKDEMKLVSNGLADQAYCEKLEAEVPTTVKFLLDHGIIVQHQDERNVYLGFNTDQNFAKGDGGGYAII
LKLFEHILSFPQVDIMWETNAEELLTHGDGTIRGVKVRKNDGRFDNVFGEQVMLSCGGFEGNREMLGRYVGPRAD
QLGLVAPGLKYNTGFGLKMGLQVGAATAGSFHGLHCELVDTRSSKPEATVWGHSFGIVVNEHSKRFYDEGNRSLF
ATCEVIAYETWRDQNQKAYFVTDAPIMDRFRPGWVYDTTDLDPEKGETIEDLAKKLGLVPQELKKTVDEYNASIN
DKEFNPLVLDGKSTFGLTPNKTNWAAPIKVAPFYGYPLTAKVVITFGGLKVDLESRVLSTTGTPIPE*
Coding >Pro_DTO377G3_2|g9484.t1
ATGTCGACCCTCAGTCCACCTGCCACTACCATTTCGGATGCCGTTACCGTGTACGACCTTATTGTAGTTGGCTCT
GGTTTCGCTGGGTGTATGACTGCTCTCAACTTCCTCGAAGATACCAAGACCCAAGGAAAGGCAGCGAAACTCGCC
TTGATCGAGGCCGGTAAAGATGGAGAACGATGTGGTGCCAGCAGATGGACACCGGCCTTCTTTCGGTTGGACAAG
AATAACAGGTTTGATAGCGGCTTCAAGGATGAGATGAAGCTCGTCAGTAATGGACTTGCCGATCAGGCATACTGC
GAGAAATTGGAAGCCGAAGTTCCCACTACAGTGAAGTTTCTTTTGGACCACGGAATCATAGTCCAACATCAAGAT
GAGAGAAATGTCTACCTCGGATTTAATACCGACCAGAACTTCGCCAAAGGAGACGGTGGCGGATATGCCATAATC
CTCAAGCTTTTCGAGCACATACTGTCGTTCCCTCAGGTGGACATTATGTGGGAGACAAATGCGGAGGAACTTCTG
ACTCATGGCGATGGTACCATTCGTGGTGTCAAGGTTCGAAAGAACGACGGCCGCTTTGACAATGTGTTTGGTGAG
CAAGTCATGCTATCATGTGGTGGCTTCGAGGGTAATCGCGAAATGCTGGGCCGATACGTCGGACCTAGAGCTGAC
CAACTTGGGTTGGTAGCCCCTGGTCTCAAGTATAATACGGGGTTTGGGCTCAAGATGGGCTTACAAGTCGGTGCC
GCAACGGCCGGCTCTTTCCATGGCCTGCACTGTGAACTTGTTGATACTCGCTCCTCAAAGCCAGAGGCAACTGTC
TGGGGCCATAGCTTCGGTATCGTCGTCAACGAACACTCCAAGCGATTTTACGATGAAGGGAATCGATCCCTCTTC
GCTACTTGCGAAGTTATTGCTTATGAGACATGGCGCGACCAAAACCAAAAAGCATATTTTGTTACCGATGCTCCC
ATTATGGACCGATTCCGACCTGGTTGGGTTTATGATACAACTGATCTGGACCCAGAGAAAGGCGAGACGATCGAA
GATCTCGCCAAAAAACTCGGTCTCGTTCCCCAAGAACTGAAGAAGACGGTGGATGAATATAATGCTTCAATTAAT
GACAAAGAATTCAACCCTTTGGTTCTTGACGGCAAGAGCACCTTCGGCCTAACTCCTAACAAGACCAACTGGGCC
GCACCGATCAAAGTGGCTCCTTTCTATGGGTATCCTCTGACTGCAAAGGTTGTAATCACTTTTGGAGGACTGAAG
GTCGATCTTGAGTCCCGTGTGCTCTCCACGACGGGTACCCCAATTCCAGAGTAA
Transcript >Pro_DTO377G3_2|g9484.t1
ATGTCGACCCTCAGTCCACCTGCCACTACCATTTCGGATGCCGTTACCGTGTACGACCTTATTGTAGTTGGCTCT
GGTTTCGCTGGGTGTATGACTGCTCTCAACTTCCTCGAAGATACCAAGACCCAAGGAAAGGCAGCGAAACTCGCC
TTGATCGAGGCCGGTAAAGATGGAGAACGATGTGGTGCCAGCAGATGGACACCGGCCTTCTTTCGGTTGGACAAG
AATAACAGGTTTGATAGCGGCTTCAAGGATGAGATGAAGCTCGTCAGTAATGGACTTGCCGATCAGGCATACTGC
GAGAAATTGGAAGCCGAAGTTCCCACTACAGTGAAGTTTCTTTTGGACCACGGAATCATAGTCCAACATCAAGAT
GAGAGAAATGTCTACCTCGGATTTAATACCGACCAGAACTTCGCCAAAGGAGACGGTGGCGGATATGCCATAATC
CTCAAGCTTTTCGAGCACATACTGTCGTTCCCTCAGGTGGACATTATGTGGGAGACAAATGCGGAGGAACTTCTG
ACTCATGGCGATGGTACCATTCGTGGTGTCAAGGTTCGAAAGAACGACGGCCGCTTTGACAATGTGTTTGGTGAG
CAAGTCATGCTATCATGTGGTGGCTTCGAGGGTAATCGCGAAATGCTGGGCCGATACGTCGGACCTAGAGCTGAC
CAACTTGGGTTGGTAGCCCCTGGTCTCAAGTATAATACGGGGTTTGGGCTCAAGATGGGCTTACAAGTCGGTGCC
GCAACGGCCGGCTCTTTCCATGGCCTGCACTGTGAACTTGTTGATACTCGCTCCTCAAAGCCAGAGGCAACTGTC
TGGGGCCATAGCTTCGGTATCGTCGTCAACGAACACTCCAAGCGATTTTACGATGAAGGGAATCGATCCCTCTTC
GCTACTTGCGAAGTTATTGCTTATGAGACATGGCGCGACCAAAACCAAAAAGCATATTTTGTTACCGATGCTCCC
ATTATGGACCGATTCCGACCTGGTTGGGTTTATGATACAACTGATCTGGACCCAGAGAAAGGCGAGACGATCGAA
GATCTCGCCAAAAAACTCGGTCTCGTTCCCCAAGAACTGAAGAAGACGGTGGATGAATATAATGCTTCAATTAAT
GACAAAGAATTCAACCCTTTGGTTCTTGACGGCAAGAGCACCTTCGGCCTAACTCCTAACAAGACCAACTGGGCC
GCACCGATCAAAGTGGCTCCTTTCTATGGGTATCCTCTGACTGCAAAGGTTGTAATCACTTTTGGAGGACTGAAG
GTCGATCTTGAGTCCCGTGTGCTCTCCACGACGGGTACCCCAATTCCAGAGTAA
Gene >Pro_DTO377G3_2|g9484.t1
ATGTCGACCCTCAGTCCACCTGCCACTACCATTTCGGATGCCGTTACCGTGTACGACCTTATTGTAGTTGGCTCT
GGTTTCGCTGTAAGCTTGACAAATAAGCGGATCGAGACGACATGGCTAATGATGATTCTCGTGATAATGCTTAGG
GGTGTATGACTGCTCTCAACTTCCTCGAAGATACCAAGACCCAAGGAAAGGCAGCGAAACTCGCCTTGATCGAGG
CCGGTAAAGATGGAGAACGATGTGGTGCCAGCAGGTAGAACCTTCCGAGTTCTAGTGATAATTGAGACGTATGTG
TGCTGACCAGATTCATTCAGATGGACACCGGCCTTCTTTCGGTTGGACAAGAGTGTGTTGCAAGATAATTGCAAA
TTGAAGTACAACTTACTAAAGACTGTGCAGATAACAGGTTTGATAGCGGCTTCAAGGATGAGATGAAGGTAAGTG
GCAGGCCAATGACTTTTATATTCCTTGCGACTGACTATAGTCTAGCTCGTCAGGTAAGCGTTCTAGTCAGCCCGA
AGATCGCACTTTTTAATTGTGGCAGTAATGGACTTGCCGATCAGGCATACTGCGAGAAATTGGAAGCCGAAGTTC
CCACTACAGTGAAGTTTCTTTTGGACCGTAAACAGATTCGGAAGCTTTCAATTTACTCGGACTGACACTGACATT
ATAAGGTAGACGGAATCATAGTCCAACATCAAGATGAGAGAAATGTCTACCTCGGATTTAATACCGGTAAGCCCT
TTGAGAAATCCAATTTCAGGCTATGCCAAATGCTAATGAACTTCTAGACCAGAACTTCGCCAAAGGAGACGTACG
CATCCTAAAATGACTTTTATACCAGCCAATATCTAATCACTACAAATAGGGTGGCGGATATGCCATAATCCTCAA
GCTTTTCGAGCACATACTGTCGTTCCCTCAGGTGGACATTATGTGGGAGACAAATGCGGAGGAACTTCTGACTCA
TGGCGATGGTACCATTCGTGGTGTCAAGGTTCGAAAGAACGACGGCCGCTTTGACAATGTGTTTGGTGAGCAAGT
CATGCTATCATGTGGTGGCTTCGAGGGTAATCGCGAAATGTGAGTGTGATCAGGACTTATTCGATATGATATGAA
TCTAAAAAGTATGGAAGGCTGGGCCGATACGTCGGACCTAGAGCTGACCAACTTGGGTTGGTAGCCCCTGGTCTC
AAGTATAATACGGGGTTTGGGCTCAAGATGGGCTTACAAGTCGGTGCCGCAACGGCCGGCTCTTTCCATGGCCTG
CACGTAAGTTACGCAAATGAAGATCTTATGAGATTCACTAACCCGTCGCAGTGTGAACTTGTTGATACTCGCTCC
TCAAAGCCAGAGGCAACTGTCTGGGGCCATAGCTTCGGTATCGTCGTCAACGAGTATGCTCTAATCATTTAAATG
AAATGAGGGATAAAGGCTCACATTACCTTCTTTAGACACTCCAAGCGATTTTACGATGAAGGGAATCGATCGTAT
GTTCGGCCTCCAGCTTGTACTAGTATCAAACTGACAAATGCAGCCTCTTCGCTACTTGCGAAGTTATTGCTTATG
AGACATGGCGCGGTAAGTAATGAGGTAGGTCGAAGGCGAACATGCACCGCTAACGTGTATCTCAGACCAAAACCA
AAAAGCATATTTGTGAGTCAGACAAACCTATATTATAAACGGTATATGGCTAAAACGCCTCCAAGTGTTACCGAT
GCTCCCATTATGGACCGATTCCGACCTGGTTGGGTTTATGATACAACTGATCTGGACCCAGAGAAAGGCGAGACG
ATCGAAGATCTCGCCAAAAAACTCGGTCTCGTTCCCCAAGAACTGAAGAAGACGGTGGATGAATATAATGCTTCG
TAAGTCAGCTAGCAGGAATGTCAGAGTCTCACACTAATGGCTGGTGGCAGAATTAATGACAAAGAATTCAACCCT
TTGGTTCTTGACGGCAAGAGCACCTTCGGCCTAACTCCTAACAAGACCAACTGGGCCGCACCGATCAAAGTGGCT
CCTTTCTATGGGTAATGCTCCCCTCAAATCATATAATCTGCTTAGATACCACTGTTACTGATGGGTATCTAGGTA
TCCTCTGACTGCAAAGGTTGTAATCACTTTTGGAGGACTGAAGGTCGATCTTGAGTCCCGTGTGCTCTCCACGAC
GGGTACCCCAATTCCAGGTATGATTTCTAATATTTCCTTATCACAGCAAAATCCATCAGACCTTCGCACAAACAC
GCTAAACTTACATCTTGCGATCATTTCCTCACTGACACGTCACGTCGTATTAAGGACTTTACTGCGCTGGTGAAC
TTAGCGGGTTTTATTACAATGAGGTAAGCCCAACCTAATGATCCGTTATTGAAGCAAAATAATTCTGACAAACCA
ACAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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