Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9474.t1
Gene name
Locationscaffold_48:103856..104803
Strand-
Gene length (bp)947
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 5.3E-43 30 288
PF00106 adh_short short chain dehydrogenase 5.0E-42 22 238
PF08659 KR KR domain 3.4E-09 23 116

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9474.t1
MSAQESNRSFKLEHLFGLKNRVALVTGGGSGIGLMATQALAVNGAKVYITGRTEEKLDRVADLYSKDIPGQIVPI
TADITSKESIQKLVDEISAKESKLHILINAAGISSPHLNTDQDNPKALQEELFKNQSTIQEWEDVMRTNVTHLFF
TTTAFLPLLSKGSEDEYGWSSTVVNISSISGLLKTAQRHFAYNASKAAAIHLTKMLAYEIVSSQIKIRVNSIAPG
VFPTEMTAHGSDKKQKSTIPKERFEGKIPAGRPGKDEDMATAVLFTVSNQYLNGQTIAVDGGYLLATGTI*
Coding >Pro_DTO377G3_2|g9474.t1
ATGTCAGCTCAAGAAAGTAACCGGAGCTTTAAGCTCGAACACCTTTTCGGGCTGAAAAACAGAGTCGCACTTGTC
ACGGGTGGAGGTTCAGGCATCGGCTTGATGGCCACTCAAGCTCTCGCCGTGAATGGTGCTAAAGTCTACATCACC
GGTCGCACAGAGGAAAAGTTGGACCGTGTTGCAGATTTATACTCGAAGGATATTCCTGGCCAGATTGTCCCAATC
ACTGCCGATATTACCTCCAAAGAGTCGATTCAGAAGCTAGTCGACGAGATATCCGCGAAGGAGTCGAAACTGCAC
ATTTTGATCAACGCCGCCGGTATTAGCTCTCCACATCTGAACACAGATCAGGACAACCCCAAAGCATTGCAGGAA
GAGCTGTTCAAAAACCAGAGCACGATCCAGGAGTGGGAAGATGTCATGCGGACTAATGTCACACACCTTTTCTTT
ACCACCACTGCCTTTCTACCCTTGCTGAGCAAGGGATCAGAGGATGAGTATGGATGGTCTAGCACAGTTGTCAAC
ATCTCGTCGATTTCAGGTCTCCTAAAAACAGCCCAGCGTCACTTCGCATACAATGCTAGTAAGGCGGCTGCAATT
CATCTCACCAAGATGTTGGCCTACGAGATTGTTTCCTCGCAAATCAAAATTCGTGTAAACAGTATCGCACCCGGG
GTCTTTCCGACCGAAATGACGGCCCATGGGAGTGACAAGAAACAAAAGAGCACAATTCCCAAAGAGAGGTTTGAA
GGCAAAATCCCTGCCGGACGGCCAGGGAAAGATGAAGACATGGCAACTGCTGTGTTGTTTACTGTCTCGAATCAG
TATCTCAATGGTCAAACTATTGCCGTCGACGGCGGGTACTTGCTGGCAACGGGCACAATCTAA
Transcript >Pro_DTO377G3_2|g9474.t1
ATGTCAGCTCAAGAAAGTAACCGGAGCTTTAAGCTCGAACACCTTTTCGGGCTGAAAAACAGAGTCGCACTTGTC
ACGGGTGGAGGTTCAGGCATCGGCTTGATGGCCACTCAAGCTCTCGCCGTGAATGGTGCTAAAGTCTACATCACC
GGTCGCACAGAGGAAAAGTTGGACCGTGTTGCAGATTTATACTCGAAGGATATTCCTGGCCAGATTGTCCCAATC
ACTGCCGATATTACCTCCAAAGAGTCGATTCAGAAGCTAGTCGACGAGATATCCGCGAAGGAGTCGAAACTGCAC
ATTTTGATCAACGCCGCCGGTATTAGCTCTCCACATCTGAACACAGATCAGGACAACCCCAAAGCATTGCAGGAA
GAGCTGTTCAAAAACCAGAGCACGATCCAGGAGTGGGAAGATGTCATGCGGACTAATGTCACACACCTTTTCTTT
ACCACCACTGCCTTTCTACCCTTGCTGAGCAAGGGATCAGAGGATGAGTATGGATGGTCTAGCACAGTTGTCAAC
ATCTCGTCGATTTCAGGTCTCCTAAAAACAGCCCAGCGTCACTTCGCATACAATGCTAGTAAGGCGGCTGCAATT
CATCTCACCAAGATGTTGGCCTACGAGATTGTTTCCTCGCAAATCAAAATTCGTGTAAACAGTATCGCACCCGGG
GTCTTTCCGACCGAAATGACGGCCCATGGGAGTGACAAGAAACAAAAGAGCACAATTCCCAAAGAGAGGTTTGAA
GGCAAAATCCCTGCCGGACGGCCAGGGAAAGATGAAGACATGGCAACTGCTGTGTTGTTTACTGTCTCGAATCAG
TATCTCAATGGTCAAACTATTGCCGTCGACGGCGGGTACTTGCTGGCAACGGGCACAATCTAA
Gene >Pro_DTO377G3_2|g9474.t1
ATGTCAGCTCAAGAAAGTAACCGGAGCTTTAAGCTCGAACACCTTTTCGGGCTGAAAAACAGAGGTGAGTTACCA
TTATAGAAACGGGCTTGCCGTAGCGCTGGCGTCGCTAACAGTGGGTAGTCGCACTTGTCACGGGTGGAGGTTCAG
GCATCGGCTTGATGGCCACTCAAGCTCTCGCCGTGAATGGTGCTAAAGTCTACATCACCGGTCGCACAGAGGAAA
AGTTGGACCGTGTTGCAGATTTATACTCGAAGGATATTCCTGGCCAGATTGTCCCAATCACTGCCGATATTACCT
CCAAAGAGTCGATTCAGAAGCTAGTCGACGAGATATCCGCGAAGGAGTCGAAACTGCACATTTTGATCAACGCCG
CCGGTATTAGCTCTCCACATCTGAACACAGATCAGGACAACCCCAAAGCATTGCAGGAAGAGCTGTTCAAAAACC
AGAGCACGATCCAGGAGTGGGAAGATGTCATGCGGACTAATGTCACACACCTTTTCTTTACCACCACTGCCTTTC
TACCCTTGCTGAGCAAGGGATCAGAGGATGAGTATGGATGGTCTAGCACAGTTGTCAACATCTCGTCGATTTCAG
GTCTCCTAAAAACAGCCCAGCGTCACTTCGCATACAATGCTAGTAAGGCGGCTGCAATTCATCTCACCAAGATGT
TGGCCTACGAGATTGTTTCCTCGCAAATCAAAATTCGTGTAAACAGTATCGCACCCGGGGTCTTTCCGACCGAAA
TGACGGCCCATGGGAGTGACAAGAAACAAAAGAGCACAATTCCCAAAGAGAGGTTTGAAGGCAAAATCCCTGCCG
GACGGCCAGGGAAAGATGAAGACATGGCAACTGCTGTGTTGTTTACTGTCTCGAATCAGTATCTCAATGGTCAAA
CTATTGCCGTCGACGGCGGGTACTTGCTGGCAACGGGCACAATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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