Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9458.t1
Gene name
Locationscaffold_48:57723..59103
Strand+
Gene length (bp)1380
Transcript length (bp)1380
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04607 RelA_SpoT Region found in RelA / SpoT proteins 3.6E-18 63 186

GO

GO Term Description Terminal node
GO:0015969 guanosine tetraphosphate metabolic process Yes
GO:0034032 purine nucleoside bisphosphate metabolic process No
GO:0019637 organophosphate metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0009119 ribonucleoside metabolic process No
GO:0009116 nucleoside metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0033875 ribonucleoside bisphosphate metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901657 glycosyl compound metabolic process No
GO:0009987 cellular process No
GO:0006793 phosphorus metabolic process No
GO:0009259 ribonucleotide metabolic process No
GO:0055086 nucleobase-containing small molecule metabolic process No
GO:0072521 purine-containing compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0042278 purine nucleoside metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0044237 cellular metabolic process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0034035 purine ribonucleoside bisphosphate metabolic process No
GO:0046128 purine ribonucleoside metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0006163 purine nucleotide metabolic process No
GO:0009150 purine ribonucleotide metabolic process No
GO:0019693 ribose phosphate metabolic process No
GO:0033865 nucleoside bisphosphate metabolic process No
GO:0044281 small molecule metabolic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0008152 metabolic process No
GO:0006753 nucleoside phosphate metabolic process No
GO:1901068 guanosine-containing compound metabolic process No
GO:0009117 nucleotide metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9458.t1
MFKLALSPEQPKAMAIQTHIDGSLSSVFMKQYKQNEYAILARAVADMCQQALLKNGIPHKTQSRAKEPESLRKKI
EQRERKNGRYKSLEDVHHDIVDLAGARIILERWEDRHFVKEIINETFKVQKEEFKNEKSGYEAVHYRVHSKQNGW
QCGPHTTEEPLVEIQVQSWYMAQWANVEHDAQYKTSKGMSREMSNSLGVWLQVSKLTEFLAEQTKAFKTKQDAKD
KRKFRSRKHIGNYLDKWFSDDDGNAADWARNQKEMGSSTALEIYLDARGWKTPESLNRLLCEHFGAEAQDEYSDV
AAKYAGIDLNRVIYLMDRIVLNCGENCSGAFEIPNNHEVHAYKIQVILSTFIWMNRLFLPTYGWQRLFTRIEDQK
TVREGILLLGMSARQNFAEESSLADDEVIKLNRLWDWFYASRDRPIMLAFTMSNQGAIRDVPKEKTDLRNALRPL
IAALGRGGA*
Coding >Pro_DTO377G3_2|g9458.t1
ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT
TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA
GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT
GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG
GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG
AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG
CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC
AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG
CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC
AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC
GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG
AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT
GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA
AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG
TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG
ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT
GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC
ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG
ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA
Transcript >Pro_DTO377G3_2|g9458.t1
ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT
TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA
GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT
GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG
GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG
AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG
CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC
AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG
CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC
AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC
GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG
AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT
GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA
AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG
TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG
ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT
GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC
ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG
ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA
Gene >Pro_DTO377G3_2|g9458.t1
ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT
TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA
GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT
GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG
GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG
AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG
CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC
AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG
CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC
AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC
GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG
AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT
GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA
AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG
TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG
ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT
GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC
ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG
ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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