© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9458.t1 |
| Gene name | |
| Location | scaffold_48:57723..59103 |
| Strand | + |
| Gene length (bp) | 1380 |
| Transcript length (bp) | 1380 |
| Coding sequence length (bp) | 1380 |
| Protein length (aa) | 460 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04607 | RelA_SpoT | Region found in RelA / SpoT proteins | 3.6E-18 | 63 | 186 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015969 | guanosine tetraphosphate metabolic process | Yes |
| GO:0034032 | purine nucleoside bisphosphate metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009119 | ribonucleoside metabolic process | No |
| GO:0009116 | nucleoside metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0033875 | ribonucleoside bisphosphate metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901657 | glycosyl compound metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0009259 | ribonucleotide metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0072521 | purine-containing compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0042278 | purine nucleoside metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0034035 | purine ribonucleoside bisphosphate metabolic process | No |
| GO:0046128 | purine ribonucleoside metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006163 | purine nucleotide metabolic process | No |
| GO:0009150 | purine ribonucleotide metabolic process | No |
| GO:0019693 | ribose phosphate metabolic process | No |
| GO:0033865 | nucleoside bisphosphate metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:1901068 | guanosine-containing compound metabolic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9458.t1 MFKLALSPEQPKAMAIQTHIDGSLSSVFMKQYKQNEYAILARAVADMCQQALLKNGIPHKTQSRAKEPESLRKKI EQRERKNGRYKSLEDVHHDIVDLAGARIILERWEDRHFVKEIINETFKVQKEEFKNEKSGYEAVHYRVHSKQNGW QCGPHTTEEPLVEIQVQSWYMAQWANVEHDAQYKTSKGMSREMSNSLGVWLQVSKLTEFLAEQTKAFKTKQDAKD KRKFRSRKHIGNYLDKWFSDDDGNAADWARNQKEMGSSTALEIYLDARGWKTPESLNRLLCEHFGAEAQDEYSDV AAKYAGIDLNRVIYLMDRIVLNCGENCSGAFEIPNNHEVHAYKIQVILSTFIWMNRLFLPTYGWQRLFTRIEDQK TVREGILLLGMSARQNFAEESSLADDEVIKLNRLWDWFYASRDRPIMLAFTMSNQGAIRDVPKEKTDLRNALRPL IAALGRGGA* |
| Coding | >Pro_DTO377G3_2|g9458.t1 ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA |
| Transcript | >Pro_DTO377G3_2|g9458.t1 ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA |
| Gene | >Pro_DTO377G3_2|g9458.t1 ATGTTCAAGCTGGCCCTATCCCCCGAGCAGCCAAAAGCCATGGCTATTCAAACCCACATCGACGGATCTTTGTCT TCTGTCTTCATGAAACAATACAAGCAGAACGAGTATGCGATTCTGGCGAGAGCCGTGGCCGATATGTGCCAACAA GCCCTTTTAAAAAATGGCATACCCCATAAGACCCAGAGCCGCGCGAAGGAGCCGGAAAGCCTCCGAAAAAAAATT GAGCAGCGTGAGCGCAAGAATGGACGATACAAAAGTCTGGAGGATGTTCATCACGATATCGTGGATCTCGCCGGG GCTCGCATCATTCTTGAAAGATGGGAAGATCGCCATTTTGTCAAGGAGATAATAAACGAGACGTTCAAAGTTCAG AAAGAGGAGTTCAAGAACGAAAAGAGTGGCTATGAAGCAGTACATTATCGTGTCCACTCTAAGCAAAATGGATGG CAGTGCGGTCCCCATACAACGGAGGAGCCCCTTGTTGAAATCCAAGTCCAGTCTTGGTACATGGCGCAATGGGCC AATGTTGAGCACGATGCTCAGTATAAGACATCTAAGGGTATGAGTCGAGAGATGAGCAACAGCCTTGGTGTTTGG CTCCAGGTGTCTAAACTGACCGAATTCCTTGCCGAACAAACCAAAGCATTCAAGACCAAGCAAGATGCGAAGGAC AAACGAAAGTTCAGGAGTAGGAAGCACATCGGCAACTATTTGGACAAGTGGTTCTCGGATGATGATGGGAATGCC GCCGACTGGGCAAGGAATCAGAAAGAGATGGGATCTTCCACCGCTTTAGAAATATATTTGGATGCTCGTGGATGG AAGACTCCTGAGTCTCTAAATCGATTGCTCTGCGAGCACTTTGGGGCCGAGGCACAGGATGAATACTCAGACGTT GCAGCAAAATATGCGGGAATCGACTTGAACCGTGTAATCTATCTAATGGACCGGATAGTCCTGAACTGCGGAGAA AATTGTTCTGGGGCCTTTGAAATCCCCAACAATCACGAGGTACATGCCTACAAGATCCAGGTGATTTTGAGTACG TTCATCTGGATGAATCGTCTCTTTCTGCCAACCTATGGGTGGCAGCGTTTATTCACGCGCATTGAGGACCAAAAG ACCGTGCGCGAGGGTATTCTCTTGCTTGGAATGAGCGCCCGGCAGAATTTTGCGGAAGAAAGCTCCTTAGCCGAT GATGAGGTCATCAAGCTGAACAGGTTGTGGGATTGGTTTTATGCAAGTCGTGATCGACCGATCATGTTGGCTTTC ACAATGTCGAACCAGGGGGCTATTAGAGATGTTCCCAAAGAGAAGACCGATCTGCGAAATGCCCTTCGGCCACTG ATTGCGGCCTTGGGTCGGGGTGGGGCTTGA |