Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g9456.t1
Gene name
Location	scaffold_48:48289..50087
Strand	-
Gene length (bp)	1798
Transcript length (bp)	1695
Coding sequence length (bp)	1695
Protein length (aa)	565

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01546	Peptidase_M20	Peptidase family M20/M25/M40	3.2E-32	142	558
PF07687	M20_dimer	Peptidase dimerisation domain	5.0E-08	264	415

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	0.34	0.0	0.74
5d_25C	Five days - 25 degrees Celsius	0.12	0.0	0.32
7d_25C	Seven days - 25 degrees Celsius	0.16	0.0	0.44
10d_25C	Ten days - 25 degrees Celsius	0.24	0.0	0.60
7d_15C	Seven days - 15 degrees Celsius	0.10	0.0	0.29
7d_30C	Seven days - 30 degrees Celsius	0.16	0.0	0.43

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	1.0	no
3d_25C	7d_25C	1.0	no
3d_25C	7d_15C	1.0	no
3d_25C	7d_30C	1.0	no
3d_25C	10d_25C	1.0	no
5d_25C	7d_25C	1.0	no
5d_25C	7d_15C	1.0	no
5d_25C	7d_30C	1.0	no
5d_25C	10d_25C	1.0	no
7d_25C	7d_15C	1.0	no
7d_25C	7d_30C	1.0	no
7d_25C	10d_25C	1.0	no
7d_15C	7d_30C	1.0	no
7d_15C	10d_25C	1.0	no
7d_30C	10d_25C	1.0	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g9456.t1 MGCLRLMVLANALTGASAFVLPFIGQTSMTAGNPGSDFICDLPPILDPANDGLPSAVSLFSSDEALKRQVQRHQA IVQVPSVSYDDLGEIGEDERWLPFHKLFPVLQKSYPTVHKRGKLEKINTFGLLYTFEGSDPTLKPTLLTAHQDVV PVADASTWTYPPFEAHFDGEYIWGRGSSDDKNSLTAIFSALEGLLSESDWKPRRTLILAFGFDEEVGLNQGAARI SEVLKERYGDDSFAIILDEGGLGSTPLDDNTIYVHPAITEKGHSNLFFELHAKGGHSSVPLPHTGIGIISEIVVA LEANPYQPQIIKDSPIHKRLICQARYSPNTQPKIEELLRNNDFDGLAVQFASTSPLNRFVVQTSQAIDLIKGGVK INAMPEVVTLAVNYRVAHHEKPVQVQHKAVQVIADVVEKYGLQVDAFKGDKEYQDYVAELSPSDMLHHSDLKRRD EVDYNGTLVIRATKAEAAPVSPVSGPVWDVFSGTIRHVFATEDKTIVPVGDVMTGNTDTRHYLSLSRNVFRWTPS ISRGLDNIHTVDEHVSIFDHLSAVKFYYDFIRNFDIADV*
Coding	>Pro_DTO377G3_2\|g9456.t1 ATGGGGTGCCTCCGCTTGATGGTCCTGGCAAATGCCCTTACTGGTGCTTCGGCTTTCGTGCTGCCCTTTATTGGC CAGACCTCTATGACAGCTGGGAATCCGGGTTCTGATTTCATATGCGATCTACCCCCTATTCTTGATCCGGCCAAT GATGGGTTGCCGTCGGCAGTGAGCTTGTTCTCGTCAGATGAGGCGTTGAAAAGACAGGTACAACGTCATCAGGCC ATTGTGCAGGTTCCGTCGGTTTCCTACGACGATCTAGGCGAAATCGGCGAGGATGAGCGATGGCTTCCGTTTCAC AAGCTTTTCCCTGTTCTTCAAAAGTCGTATCCCACAGTTCATAAGCGTGGAAAGCTAGAGAAAATCAATACTTTC GGGCTGCTTTACACATTTGAAGGCTCGGATCCAACTCTGAAGCCAACCCTCCTTACCGCCCATCAGGATGTAGTT CCCGTGGCTGATGCATCCACATGGACTTATCCACCTTTTGAAGCCCATTTTGATGGCGAATATATCTGGGGTCGG GGTTCATCCGATGATAAGAACAGTCTCACAGCCATCTTCTCGGCCCTAGAAGGTCTTTTGTCCGAGTCTGATTGG AAACCTAGACGAACTCTCATTTTGGCATTCGGATTTGATGAGGAAGTTGGTCTCAACCAAGGTGCTGCACGGATC AGTGAGGTACTCAAGGAGAGATATGGTGACGACAGTTTTGCTATTATCCTTGACGAGGGCGGTTTAGGCTCGACA CCTCTTGATGACAATACCATATATGTCCACCCTGCAATCACTGAAAAGGGCCATTCCAATCTCTTCTTCGAGCTT CATGCCAAGGGGGGCCATAGTTCGGTCCCCTTACCGCATACGGGAATCGGAATTATTTCTGAGATTGTTGTTGCG CTCGAGGCTAATCCGTACCAGCCTCAAATCATCAAGGACAGCCCCATTCACAAACGTCTGATCTGTCAAGCGCGA TATTCTCCCAACACCCAGCCCAAGATCGAAGAGCTACTGCGAAACAATGACTTTGATGGACTTGCTGTTCAATTC GCCAGCACTAGCCCGTTGAACCGGTTCGTTGTTCAAACCTCACAGGCTATCGATCTAATCAAAGGCGGGGTGAAA ATCAATGCCATGCCGGAGGTCGTTACCCTGGCTGTCAACTATCGCGTTGCACACCATGAAAAGCCGGTACAGGTT CAACACAAGGCTGTTCAAGTGATTGCGGATGTAGTTGAGAAGTATGGTCTCCAGGTGGATGCATTCAAAGGCGAC AAAGAATATCAGGATTATGTTGCAGAGCTTTCTCCCAGTGATATGCTACATCACAGTGATCTAAAGCGCCGTGAT GAAGTTGACTACAATGGCACTCTTGTCATCAGAGCCACAAAAGCCGAAGCTGCACCGGTGTCTCCTGTTAGTGGT CCTGTTTGGGATGTTTTCTCGGGTACAATTCGACACGTCTTTGCAACAGAAGATAAGACTATCGTTCCAGTCGGA GACGTCATGACTGGTAATACCGATACTAGGCATTATCTCAGCCTTTCCCGCAATGTGTTTAGGTGGACCCCATCG ATCAGCCGGGGACTGGACAATATTCACACTGTCGATGAGCATGTGAGTATCTTTGACCACTTGAGCGCCGTTAAG TTCTACTATGACTTCATTCGCAACTTCGACATTGCGGATGTATAA
Transcript	>Pro_DTO377G3_2\|g9456.t1 ATGGGGTGCCTCCGCTTGATGGTCCTGGCAAATGCCCTTACTGGTGCTTCGGCTTTCGTGCTGCCCTTTATTGGC CAGACCTCTATGACAGCTGGGAATCCGGGTTCTGATTTCATATGCGATCTACCCCCTATTCTTGATCCGGCCAAT GATGGGTTGCCGTCGGCAGTGAGCTTGTTCTCGTCAGATGAGGCGTTGAAAAGACAGGTACAACGTCATCAGGCC ATTGTGCAGGTTCCGTCGGTTTCCTACGACGATCTAGGCGAAATCGGCGAGGATGAGCGATGGCTTCCGTTTCAC AAGCTTTTCCCTGTTCTTCAAAAGTCGTATCCCACAGTTCATAAGCGTGGAAAGCTAGAGAAAATCAATACTTTC GGGCTGCTTTACACATTTGAAGGCTCGGATCCAACTCTGAAGCCAACCCTCCTTACCGCCCATCAGGATGTAGTT CCCGTGGCTGATGCATCCACATGGACTTATCCACCTTTTGAAGCCCATTTTGATGGCGAATATATCTGGGGTCGG GGTTCATCCGATGATAAGAACAGTCTCACAGCCATCTTCTCGGCCCTAGAAGGTCTTTTGTCCGAGTCTGATTGG AAACCTAGACGAACTCTCATTTTGGCATTCGGATTTGATGAGGAAGTTGGTCTCAACCAAGGTGCTGCACGGATC AGTGAGGTACTCAAGGAGAGATATGGTGACGACAGTTTTGCTATTATCCTTGACGAGGGCGGTTTAGGCTCGACA CCTCTTGATGACAATACCATATATGTCCACCCTGCAATCACTGAAAAGGGCCATTCCAATCTCTTCTTCGAGCTT CATGCCAAGGGGGGCCATAGTTCGGTCCCCTTACCGCATACGGGAATCGGAATTATTTCTGAGATTGTTGTTGCG CTCGAGGCTAATCCGTACCAGCCTCAAATCATCAAGGACAGCCCCATTCACAAACGTCTGATCTGTCAAGCGCGA TATTCTCCCAACACCCAGCCCAAGATCGAAGAGCTACTGCGAAACAATGACTTTGATGGACTTGCTGTTCAATTC GCCAGCACTAGCCCGTTGAACCGGTTCGTTGTTCAAACCTCACAGGCTATCGATCTAATCAAAGGCGGGGTGAAA ATCAATGCCATGCCGGAGGTCGTTACCCTGGCTGTCAACTATCGCGTTGCACACCATGAAAAGCCGGTACAGGTT CAACACAAGGCTGTTCAAGTGATTGCGGATGTAGTTGAGAAGTATGGTCTCCAGGTGGATGCATTCAAAGGCGAC AAAGAATATCAGGATTATGTTGCAGAGCTTTCTCCCAGTGATATGCTACATCACAGTGATCTAAAGCGCCGTGAT GAAGTTGACTACAATGGCACTCTTGTCATCAGAGCCACAAAAGCCGAAGCTGCACCGGTGTCTCCTGTTAGTGGT CCTGTTTGGGATGTTTTCTCGGGTACAATTCGACACGTCTTTGCAACAGAAGATAAGACTATCGTTCCAGTCGGA GACGTCATGACTGGTAATACCGATACTAGGCATTATCTCAGCCTTTCCCGCAATGTGTTTAGGTGGACCCCATCG ATCAGCCGGGGACTGGACAATATTCACACTGTCGATGAGCATGTGAGTATCTTTGACCACTTGAGCGCCGTTAAG TTCTACTATGACTTCATTCGCAACTTCGACATTGCGGATGTATAA
Gene	>Pro_DTO377G3_2\|g9456.t1 ATGGGGTGCCTCCGCTTGATGGTCCTGGCAAATGCCCTTACTGGTGCTTCGGCTTTCGTGCTGCCCTTTATTGGC CAGACCTCTATGACAGCTGGGAATCCGGGTTCTGATTTCATATGCGATCTACCCCCTATTCTTGATCCGGCCAAT GATGGGTTGCCGTCGGCAGTGAGCTTGTTCTCGTCAGATGAGGCGTTGAAAAGACAGGTACAACGTCATCAGGCC ATTGTGCAGGTTCCGTCGGTTTCCTACGACGATCTAGGCGAAATCGGCGAGGATGAGCGATGGCTTCCGTTTCAC AAGCTTTTCCCTGTTCTTCAAAAGTCGTATCCCACAGTGTAAGCTAGAAGTCCATCATGGAAACTGTCCTCACAG CTGATCACTTCAAGTCATAAGCGTGGAAAGCTAGAGAAAATCAATACTTTCGGGCTGCTTTACACATTTGAAGGC TCGGATCCAACTCTGAAGCCAACCCTCCTTACCGCCCATCAGGATGTAGTTCCCGTGGCTGATGCATCCACATGG ACTTATCCACCTTTTGAAGCCCATTTTGATGGCGAATATATCTGGGGTCGGGGTTCATCCGATGATAAGAACAGT CTCACAGCCATCTTCTCGGCCCTAGAAGGTCTTTTGTCCGAGTCTGATTGGAAACCTAGACGAACTCTCATTTTG GCATTCGGATTTGATGAGGAAGTTGGTCTCAACCAAGGTGCTGCACGGATCAGTGAGGTACTCAAGGAGAGATAT GGTGACGACAGTTTTGCTATTATCCTTGACGAGGGCGGTTTAGGCTCGACACCTCTTGATGACAATACCATATAT GTCCACCCTGCAATCACTGAAAAGGGCCATTCCAATCTCTTCTTCGAGCTTCATGCCAAGGGGGGCCATAGTTCG GTCCCCTTACCGCATACGGGAATCGGAATTATTTCTGAGATTGTTGTTGCGCTCGAGGCTAATCCGTACCAGCCT CAAATCATCAAGGACAGCCCCATTCACAAACGTCTGATCTGTCAAGCGCGATATTCTCCCAACACCCAGCCCAAG ATCGAAGAGCTACTGCGAAACAATGACTTTGATGGACTTGCTGTTCAATTCGCCAGCACTAGCCCGTTGAACCGG TTCGTTGTTCAAACCTCACAGGCTATCGATCTAATCAAAGGCGGGGTGAAAATCAATGCCATGCCGGAGGTCGTT ACCCTGGCTGTCAACTATCGCGTTGCACACCATGAAAAGCCGGTACAGGTTCAACACAAGGCTGTTCAAGTGATT GCGGATGTAGTTGAGAAGTATGGTCTCCAGGTGGATGCATTCAAAGGCGACAAAGAATATCAGGATTATGTTGCA GAGCTTTCTCCCAGTGATATGCTACATCACAGTGATCTAAAGCGCCGTGATGAAGTTGACTACAATGGCACTCTT GTCATCAGAGCCACAAAAGCCGAAGCTGCACCGGTGTCTCCTGTTAGTGGTCCTGTTTGGGATGTTTTCTCGGGT ACAATTCGACACGTCTTTGCAACAGAAGATAAGACTATCGTTCCAGTCGGAGACGTCATGACTGGTAATACCGAT ACTAGGCATTATCTCAGTAAGTTTCACTCTGGGTAGCCACATATCATACAAACTGACGGTATCATCAGGCCTTTC CCGCAATGTGTTTAGGTGGACCCCATCGATCAGCCGGGGACTGGACAATATTCACACTGTCGATGAGCATGTGAG TATCTTTGACCACTTGAGCGCCGTTAAGTTCTACTATGACTTCATTCGCAACTTCGACATTGCGGATGTATAA

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