Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g9446.t1
Gene name
Location	scaffold_48:27586..28606
Strand	+
Gene length (bp)	1020
Transcript length (bp)	651
Coding sequence length (bp)	651
Protein length (aa)	217

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02466	Tim17	Tim17/Tim22/Tim23/Pmp24 family	1.2E-13	20	130

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g9446.t1 MDVLLSQLNALVLKPELAPLLSLVKGARNGIVYGSKVRFPHALVMIFLFRSGTIREKTKLVLKATRLHARNLATF ALIYKASMIVLRNIPAGAGKEGRYDSFFAGLLGGYAVFGRQPGSISKQIVIYVFARVMLALAKLSVQPKMHPLSS LITSDARSQIMNNAYPVFAGMTWAMVMYIFRWHPETLASSLRSSMVYIYGDSDHWDSLRTLLLHNK*
Coding	>Pro_DTO377G3_2\|g9446.t1 ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA
Transcript	>Pro_DTO377G3_2\|g9446.t1 ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA
Gene	>Pro_DTO377G3_2\|g9446.t1 ATGGATGTATTGCTCGTGAGTTCCGGAGCGTATCCGACTATACACAGCAGTATTGACATTCTCCTCCGCAGTCCC AACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAGGGTGCACGCAATGGAATCG TCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTGTATGTTAGACCTTGGACAGCCGAAAACCCCGGTATAT GGCATAGCTGACTGACTGCGACTGCTTCTAGAATGATATTTCTGTTCAGATCTGGAACGTACGTCCCCACGCGCG ACCTCACCCCCCAGAACGAAACTGATAGCTTTGTTATTCAGGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCA ACCCGCCTGCATGCGCGTAACCTGGCCACATTTGCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATA CCAGCTGGCGCCGGGAAAGAAGGCCGATATGATAGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGA CGACAGCCGGGCAGTATTAGCAAGCAGGTATGTAATTTGGACATGCGCCTGATTGTGGGAACTATTCAAACCTCG ACTCCCGAATACACTCCTTCTCTGCAGAGCTAACTCGAATCTAGATTGTTATTTATGTCTTCGCGCGTGTGATGC TTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCCCTCATCACGTCCGATGCTCGCAGTC AGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATGGTCATGTACATTTTCCGGTGGCACC CGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATGTATGTTTACCCTCCACTATATATGATTAGCC TCAGTTTGAGTACTTTGAAAGTTCGAGTTATTTTCCAATGCTAACATTCATGTCAACAACAGTTACGGCGACTCA GACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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