Protein ID | Pro_DTO377G3_2|g9446.t1 |
Gene name | |
Location | scaffold_48:27586..28606 |
Strand | + |
Gene length (bp) | 1020 |
Transcript length (bp) | 651 |
Coding sequence length (bp) | 651 |
Protein length (aa) | 217 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02466 | Tim17 | Tim17/Tim22/Tim23/Pmp24 family | 1.2E-13 | 20 | 130 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9446.t1 MDVLLSQLNALVLKPELAPLLSLVKGARNGIVYGSKVRFPHALVMIFLFRSGTIREKTKLVLKATRLHARNLATF ALIYKASMIVLRNIPAGAGKEGRYDSFFAGLLGGYAVFGRQPGSISKQIVIYVFARVMLALAKLSVQPKMHPLSS LITSDARSQIMNNAYPVFAGMTWAMVMYIFRWHPETLASSLRSSMVYIYGDSDHWDSLRTLLLHNK* |
Coding | >Pro_DTO377G3_2|g9446.t1 ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA |
Transcript | >Pro_DTO377G3_2|g9446.t1 ATGGATGTATTGCTCTCCCAACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAG GGTGCACGCAATGGAATCGTCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTAATGATATTTCTGTTCAGA TCTGGAACGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCAACCCGCCTGCATGCGCGTAACCTGGCCACATTT GCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATACCAGCTGGCGCCGGGAAAGAAGGCCGATATGAT AGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGACGACAGCCGGGCAGTATTAGCAAGCAGATTGTT ATTTATGTCTTCGCGCGTGTGATGCTTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCC CTCATCACGTCCGATGCTCGCAGTCAGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATG GTCATGTACATTTTCCGGTGGCACCCGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATTTACGGC GACTCAGACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA |
Gene | >Pro_DTO377G3_2|g9446.t1 ATGGATGTATTGCTCGTGAGTTCCGGAGCGTATCCGACTATACACAGCAGTATTGACATTCTCCTCCGCAGTCCC AACTGAACGCGCTCGTTCTAAAGCCCGAACTCGCACCGCTACTGTCATTAGTGAAGGGTGCACGCAATGGAATCG TCTACGGATCGAAAGTTCGCTTTCCGCATGCGCTGGTGTATGTTAGACCTTGGACAGCCGAAAACCCCGGTATAT GGCATAGCTGACTGACTGCGACTGCTTCTAGAATGATATTTCTGTTCAGATCTGGAACGTACGTCCCCACGCGCG ACCTCACCCCCCAGAACGAAACTGATAGCTTTGTTATTCAGGATACGTGAAAAGACGAAGCTTGTTTTGAAAGCA ACCCGCCTGCATGCGCGTAACCTGGCCACATTTGCCCTCATATACAAGGCATCCATGATCGTGCTCCGGAATATA CCAGCTGGCGCCGGGAAAGAAGGCCGATATGATAGCTTCTTCGCAGGCCTGCTGGGCGGGTATGCGGTTTTTGGA CGACAGCCGGGCAGTATTAGCAAGCAGGTATGTAATTTGGACATGCGCCTGATTGTGGGAACTATTCAAACCTCG ACTCCCGAATACACTCCTTCTCTGCAGAGCTAACTCGAATCTAGATTGTTATTTATGTCTTCGCGCGTGTGATGC TTGCTCTCGCTAAACTCTCCGTCCAACCAAAAATGCACCCTCTTTCCTCCCTCATCACGTCCGATGCTCGCAGTC AGATCATGAATAATGCTTACCCCGTTTTCGCCGGTATGACCTGGGCGATGGTCATGTACATTTTCCGGTGGCACC CGGAGACGCTGGCGTCGAGCCTGCGGAGTAGCATGGTGTATATGTATGTTTACCCTCCACTATATATGATTAGCC TCAGTTTGAGTACTTTGAAAGTTCGAGTTATTTTCCAATGCTAACATTCATGTCAACAACAGTTACGGCGACTCA GACCATTGGGATTCCCTCCGCACTCTGCTTCTACACAACAAATGA |