Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9436.t1
Gene name
Locationscaffold_48:1664..2391
Strand-
Gene length (bp)727
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 7.3E-28 7 205
PF05368 NmrA NmrA-like family 1.8E-09 3 73
PF01370 Epimerase NAD dependent epimerase/dehydratase family 3.5E-10 3 123

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9436.t1
MKILILGATGACGEQITRKAITNGHQVTAFVRNAGKLSQDLAPKVQVIEGSITDEETLRGAVRGQAVIISALGPA
GPGYKSWNDTYRGVFPSFYTLLLRVMRECGVRRVFAMTTVSVYAEQDQRSVARAALTGLVWAFGRPAYKEFVEIG
NTFQSHGKDIEWTVYRVGAITDGDEGKPSAGYVGQKGSGLRITRKCMAIWLVEQAEAFPLEWVRQMPYISST*
Coding >Pro_DTO377G3_2|g9436.t1
ATGAAGATTTTGATCTTGGGTGCAACTGGTGCTTGTGGGGAACAAATCACCCGCAAGGCCATCACAAATGGACAT
CAAGTTACAGCGTTCGTGCGCAATGCCGGGAAACTATCCCAGGATCTCGCACCCAAAGTCCAGGTAATCGAAGGC
AGTATCACGGATGAAGAGACCTTACGGGGCGCAGTACGAGGCCAAGCTGTCATAATTTCGGCCCTAGGGCCCGCG
GGTCCTGGATACAAATCATGGAACGATACGTATCGTGGTGTGTTCCCTTCCTTCTACACCCTACTGCTACGCGTG
ATGCGGGAATGTGGTGTGAGGCGGGTGTTTGCGATGACGACAGTGAGTGTGTACGCAGAACAGGATCAGCGCTCT
GTTGCACGAGCGGCATTGACGGGGTTAGTATGGGCTTTTGGTCGACCAGCTTATAAAGAGTTTGTTGAAATCGGG
AATACATTTCAGAGCCATGGGAAAGATATCGAATGGACTGTGTATCGAGTGGGCGCCATTACTGACGGAGACGAG
GGCAAACCAAGCGCTGGCTACGTTGGACAGAAAGGCTCTGGGCTGAGGATTACCAGGAAGTGTATGGCGATCTGG
CTTGTCGAGCAAGCAGAAGCCTTCCCATTAGAATGGGTGAGGCAGATGCCATATATTTCGTCGACCTAA
Transcript >Pro_DTO377G3_2|g9436.t1
ATGAAGATTTTGATCTTGGGTGCAACTGGTGCTTGTGGGGAACAAATCACCCGCAAGGCCATCACAAATGGACAT
CAAGTTACAGCGTTCGTGCGCAATGCCGGGAAACTATCCCAGGATCTCGCACCCAAAGTCCAGGTAATCGAAGGC
AGTATCACGGATGAAGAGACCTTACGGGGCGCAGTACGAGGCCAAGCTGTCATAATTTCGGCCCTAGGGCCCGCG
GGTCCTGGATACAAATCATGGAACGATACGTATCGTGGTGTGTTCCCTTCCTTCTACACCCTACTGCTACGCGTG
ATGCGGGAATGTGGTGTGAGGCGGGTGTTTGCGATGACGACAGTGAGTGTGTACGCAGAACAGGATCAGCGCTCT
GTTGCACGAGCGGCATTGACGGGGTTAGTATGGGCTTTTGGTCGACCAGCTTATAAAGAGTTTGTTGAAATCGGG
AATACATTTCAGAGCCATGGGAAAGATATCGAATGGACTGTGTATCGAGTGGGCGCCATTACTGACGGAGACGAG
GGCAAACCAAGCGCTGGCTACGTTGGACAGAAAGGCTCTGGGCTGAGGATTACCAGGAAGTGTATGGCGATCTGG
CTTGTCGAGCAAGCAGAAGCCTTCCCATTAGAATGGGTGAGGCAGATGCCATATATTTCGTCGACCTAA
Gene >Pro_DTO377G3_2|g9436.t1
ATGAAGATTTTGATCTTGGGTGCAACTGGTGCTTGTGGGGAACAAATCACCCGCAAGGCCATCACAAATGGACAT
CAAGTTACAGCGTTCGTGCGCAATGCCGGGAAACTATCCCAGGATCTCGCACCCAAAGTCCAGGTAATTACGCTT
ACTCCCTCATGGTCAAAGCATCGGCTAATCAAGCTGCGGCAAGTAGGTAATCGAAGGCAGTATCACGGATGAAGA
GACCTTACGGGGCGCAGTACGAGGCCAAGCTGTCATAATTTCGGCCCTAGGGCCCGCGGGTCCTGGATACAAATC
ATGGAACGATACGTATCGTGGTGTGTTCCCTTCCTTCTACACCCTACTGCTACGCGTGATGCGGGAATGTGGTGT
GAGGCGGGTGTTTGCGATGACGACAGTGAGTGTGTACGCAGAACAGGATCAGCGCTCTGTTGCACGAGCGGCATT
GACGGGGTTAGTATGGGCTTTTGGTCGACCAGCTTATAAAGAGTTTGTTGAAATCGGGAATACATTTCAGAGCCA
TGGGAAAGATATCGAATGGACTGTGTATCGAGTGGGCGCCATTACTGACGGAGACGAGGGCAAACCAAGCGCTGG
CTACGTTGGACAGAAAGGCTCTGGGCTGAGGATTACCAGGAAGTGTATGGCGATCTGGCTTGTCGAGCAAGCAGA
AGCCTTCCCATTAGAATGGGTGAGGCAGATGCCATATATTTCGTCGACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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