Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g943.t1
Gene name
Locationscaffold_01:2497266..2497779
Strand-
Gene length (bp)513
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03694 Erg28 Erg28 like protein 3.7E-37 15 123

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 50 69 19
3 81 103 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g943.t1
MDQYLAYLPQSEGLLPKWLFFVSVVSALNSLQAYIAPNYTSLLYSNGTVPATPLSGRIFGTWTFLSAVIRMTAAY
NITNPVAYNLGMWTYGIALSHFVGELVLGNASLKGRFLNPLIVASGSLAWMFTQRGAYLG*
Coding >Pro_DTO377G3_2|g943.t1
ATGGACCAATACTTAGCCTATCTGCCTCAGTCCGAGGGCCTCCTGCCCAAATGGCTCTTTTTCGTCTCGGTCGTT
TCCGCTCTTAACAGCCTGCAAGCCTACATTGCACCGAATTACACCTCTCTACTCTACAGCAATGGCACGGTTCCC
GCAACTCCGCTCTCCGGCCGCATCTTCGGAACCTGGACCTTCCTCTCTGCAGTCATTCGTATGACTGCTGCTTAC
AACATCACGAACCCTGTCGCGTACAACCTTGGCATGTGGACGTACGGCATTGCGCTGTCTCACTTTGTTGGCGAG
CTCGTCCTCGGCAATGCCTCGCTCAAGGGCCGGTTCTTGAATCCTTTGATTGTTGCGTCGGGTTCGCTGGCTTGG
ATGTTCACCCAGCGCGGAGCGTACCTGGGTTAA
Transcript >Pro_DTO377G3_2|g943.t1
ATGGACCAATACTTAGCCTATCTGCCTCAGTCCGAGGGCCTCCTGCCCAAATGGCTCTTTTTCGTCTCGGTCGTT
TCCGCTCTTAACAGCCTGCAAGCCTACATTGCACCGAATTACACCTCTCTACTCTACAGCAATGGCACGGTTCCC
GCAACTCCGCTCTCCGGCCGCATCTTCGGAACCTGGACCTTCCTCTCTGCAGTCATTCGTATGACTGCTGCTTAC
AACATCACGAACCCTGTCGCGTACAACCTTGGCATGTGGACGTACGGCATTGCGCTGTCTCACTTTGTTGGCGAG
CTCGTCCTCGGCAATGCCTCGCTCAAGGGCCGGTTCTTGAATCCTTTGATTGTTGCGTCGGGTTCGCTGGCTTGG
ATGTTCACCCAGCGCGGAGCGTACCTGGGTTAA
Gene >Pro_DTO377G3_2|g943.t1
ATGGACCAATACTTAGCCTATCTGCCTCAGTCCGAGGGCCTCCTGCCCAAATGGCTCTTTTTCGTAAGTTCTACC
CGTGTCCACCCCAGTCCCCATTACCACTGCCACTCCGAACCCCTAGCTACCGATGCCTCTATTCCCCCAATCTAA
CCACCACTCTCTATACAGGTCTCGGTCGTTTCCGCTCTTAACAGCCTGCAAGCCTACATTGCACCGAATTACACC
TCTCTACTCTACAGCAATGGCACGGTTCCCGCAACTCCGCTCTCCGGCCGCATCTTCGGAACCTGGACCTTCCTC
TCTGCAGTCATTCGTATGACTGCTGCTTACAACATCACGAACCCTGTCGCGTACAACCTTGGCATGTGGACGTAC
GGCATTGCGCTGTCTCACTTTGTTGGCGAGCTCGTCCTCGGCAATGCCTCGCTCAAGGGCCGGTTCTTGAATCCT
TTGATTGTTGCGTCGGGTTCGCTGGCTTGGATGTTCACCCAGCGCGGAGCGTACCTGGGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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