Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9424.t1
Gene name
Locationscaffold_47:107009..108276
Strand-
Gene length (bp)1267
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12271 Chs7 Chitin synthase export chaperone 8.3E-110 5 290

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 51 70 19
2 85 107 22
3 114 136 22
4 146 168 22
5 189 208 19
6 223 245 22
7 258 280 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9424.t1
MGSTQFGKFHDFCRDSTLPVCNLFTNQTATDAFGACDLTGIPLSGDRHLRNLGSILLAFIAIVLSLGMIWRSDKK
HAAVGRREMQLFLLGFIIIEICEIFTVGGFPLHDAVRKGFSAVHIAAITANCWVLLMNALVGFQLLDDGTPASIG
LICASAVVLFIGTGYIALDTAFDWTGRFQSSHDTPNRNIALYVLYQLFPLVCIVLFYVLEAVLVLRVLGEFRPML
YLSGAGLLFAIGQIFNYVISTHLCQASHGKINGALFETLFTLLSVSGVWAFWSSITEDDWPLPVGGGAYN*
Coding >Pro_DTO377G3_2|g9424.t1
ATGGGGTCCACTCAATTCGGGAAATTTCACGACTTCTGTCGCGACTCGACCCTACCAGTTTGCAATCTTTTCACC
AATCAAACCGCAACTGATGCCTTCGGCGCGTGCGATCTGACCGGCATTCCTCTCAGTGGGGATAGACACCTTCGG
AACTTAGGTTCGATTCTGCTAGCCTTCATCGCTATTGTCTTGAGCTTGGGTATGATATGGAGATCGGACAAGAAG
CACGCTGCTGTCGGCCGGAGGGAAATGCAATTATTTTTGCTCGGTTTCATCATTATTGAGATCTGCGAAATATTC
ACAGTGGGCGGCTTCCCGCTGCACGACGCAGTCCGAAAGGGATTTTCTGCAGTACACATCGCCGCGATTACGGCG
AATTGCTGGGTCCTTCTCATGAACGCACTGGTTGGCTTCCAATTACTTGACGACGGCACCCCAGCTTCCATCGGT
CTCATCTGCGCATCTGCTGTGGTCCTCTTCATCGGGACAGGCTATATTGCATTGGACACTGCATTCGATTGGACT
GGCCGCTTCCAGTCAAGCCATGATACACCAAATCGCAACATCGCCCTCTATGTTCTGTACCAACTCTTCCCACTC
GTCTGCATTGTCTTGTTCTACGTCCTAGAGGCCGTACTAGTGCTTCGGGTTCTGGGCGAGTTCCGCCCAATGCTG
TATCTCAGCGGTGCTGGCTTGTTGTTCGCAATTGGTCAAATCTTTAATTATGTTATCAGCACCCACCTGTGCCAG
GCCTCGCATGGCAAGATCAATGGAGCTTTATTCGAAACTCTCTTCACCCTCCTTTCTGTCTCCGGGGTCTGGGCC
TTCTGGAGTAGTATCACCGAAGACGACTGGCCTCTGCCCGTGGGTGGCGGTGCTTATAACTGA
Transcript >Pro_DTO377G3_2|g9424.t1
ATGGGGTCCACTCAATTCGGGAAATTTCACGACTTCTGTCGCGACTCGACCCTACCAGTTTGCAATCTTTTCACC
AATCAAACCGCAACTGATGCCTTCGGCGCGTGCGATCTGACCGGCATTCCTCTCAGTGGGGATAGACACCTTCGG
AACTTAGGTTCGATTCTGCTAGCCTTCATCGCTATTGTCTTGAGCTTGGGTATGATATGGAGATCGGACAAGAAG
CACGCTGCTGTCGGCCGGAGGGAAATGCAATTATTTTTGCTCGGTTTCATCATTATTGAGATCTGCGAAATATTC
ACAGTGGGCGGCTTCCCGCTGCACGACGCAGTCCGAAAGGGATTTTCTGCAGTACACATCGCCGCGATTACGGCG
AATTGCTGGGTCCTTCTCATGAACGCACTGGTTGGCTTCCAATTACTTGACGACGGCACCCCAGCTTCCATCGGT
CTCATCTGCGCATCTGCTGTGGTCCTCTTCATCGGGACAGGCTATATTGCATTGGACACTGCATTCGATTGGACT
GGCCGCTTCCAGTCAAGCCATGATACACCAAATCGCAACATCGCCCTCTATGTTCTGTACCAACTCTTCCCACTC
GTCTGCATTGTCTTGTTCTACGTCCTAGAGGCCGTACTAGTGCTTCGGGTTCTGGGCGAGTTCCGCCCAATGCTG
TATCTCAGCGGTGCTGGCTTGTTGTTCGCAATTGGTCAAATCTTTAATTATGTTATCAGCACCCACCTGTGCCAG
GCCTCGCATGGCAAGATCAATGGAGCTTTATTCGAAACTCTCTTCACCCTCCTTTCTGTCTCCGGGGTCTGGGCC
TTCTGGAGTAGTATCACCGAAGACGACTGGCCTCTGCCCGTGGGTGGCGGTGCTTATAACTGA
Gene >Pro_DTO377G3_2|g9424.t1
ATGGGGTCCACTCAATTCGGGAAATTTCACGTAAGTGCGGATCGATTCTGGAGACCGACCTCCTAATGGGCAGAT
GCTGACCGCACACCCTGTATGGGTACCACAGGACTTCTGTCGCGACTCGACCCTACCAGTTTGCAATGTGAGTGA
GATCGTTCTGAAAATTCCCTATAATGGCTGGAATGTCAACTGACTGTATCATTCGTCGTGTACAGCTTTTCACCA
ATCAAACCGCAACTGATGCCTTCGGCGCGTGCGATCTGACCGGCATTCCTCTCAGTGGGGATAGACACCTTCGGA
ACTTAGGTACGATCTGCAAGACCGAGGTCGATGTGATTGGGGACAAATGATATGAGCACGATTGCTGATTTTTGA
TAGGTTCGATTCTGCTAGCCTTCATCGCTATTGTCTTGAGCTTGGGTATGATATGGAGATCGGACAAGAAGCACG
CTGCTGTCGGCCGGAGGTATGGAATATCTTTGTTCGCTATTGAGATGTCGACTGACATGGCGGTATTTGCAGGGA
AATGCAATTATTTTTGCTCGGTTTCATCATTATTGAGATCTGCGAAATATTCACAGTGGGCGGCTTCCCGCTGCA
CGACGCAGTCCGAAAGGTAGGATTTCTACATGATAGACTCGAGGCCTCAGCTGACAGAAACATCTAGGGATTTTC
TGCAGTACACATCGCCGCGATTACGGCGAATTGCTGGGTCCTTCTCATGAACGCACTGGTTGGCTTCCAATTACT
TGACGACGGCACCCCAGCTTCCATCGGTCTCATCTGCGCATCTGCTGTGGTCCTCTTCATCGGGACAGGCTATAT
TGCATTGGACACTGCATTCGATTGGACTGGCCGCTTCCAGTCAAGCCATGATACACCAAATCGCAACATCGCCCT
CTATGTTCTGTACCAACTCTTCCCACTCGTCTGCATTGTCTTGTTCTACGTCCTAGAGGCCGTACTAGTGCTTCG
GGTTCTGGGCGAGTTCCGCCCAATGCGTAGGTTTACCACACTGGACTCAAAATAAACATGTGCTAACGGTGCAAC
AGTGTATCTCAGCGGTGCTGGCTTGTTGTTCGCAATTGGTCAAATCTTTAATTATGTTATCAGCACCCACCTGTG
CCAGGCCTCGCATGGCAAGATCAATGGAGCTTTATTCGAAACTCTCTTCACCCTCCTTTCTGTCTCCGGGGTCTG
GGCCTTCTGGAGTAGTATCACCGAAGACGACTGGCCTCTGCCCGTGGGTGGCGGTGCTTATAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail