Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9412.t1
Gene name
Locationscaffold_47:75394..75855
Strand-
Gene length (bp)461
Transcript length (bp)237
Coding sequence length (bp)237
Protein length (aa) 79

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00808 CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1.8E-04 9 66

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Histone-like TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9412.t1
MAAAQKLYPRGTVKRIVKAHSNRSVSKNADILIFLDYMLFMQELMREASIQSRKSGEKNISANTVRKVTEKTLRK
FQG*
Coding >Pro_DTO377G3_2|g9412.t1
ATGGCGGCAGCTCAAAAACTTTACCCACGAGGAACAGTCAAGCGCATTGTCAAAGCCCACTCCAATCGGAGCGTG
AGCAAGAATGCCGACATTTTGATCTTCTTAGACTATATGCTATTCATGCAAGAGTTAATGCGCGAGGCATCGATT
CAGTCGCGCAAGTCTGGCGAAAAAAACATTTCAGCGAATACCGTGCGCAAAGTGACTGAGAAAACACTGCGCAAA
TTCCAGGGATAG
Transcript >Pro_DTO377G3_2|g9412.t1
ATGGCGGCAGCTCAAAAACTTTACCCACGAGGAACAGTCAAGCGCATTGTCAAAGCCCACTCCAATCGGAGCGTG
AGCAAGAATGCCGACATTTTGATCTTCTTAGACTATATGCTATTCATGCAAGAGTTAATGCGCGAGGCATCGATT
CAGTCGCGCAAGTCTGGCGAAAAAAACATTTCAGCGAATACCGTGCGCAAAGTGACTGAGAAAACACTGCGCAAA
TTCCAGGGATAG
Gene >Pro_DTO377G3_2|g9412.t1
ATGGCGGCAGCTCAAAAACTTTACCCACGAGGAACAGTCAAGCGCATTGTCAAAGCCCACTCCAATCGGAGCGTG
AGCAAGAATGCCGACATTTTGGTACGCGGTCGTCCTGATATCCCCTCTCTTATCCAGTTGCTAATACTACCTTTA
TAGATCTTCTTAGACTATATGCTATTCATGCAAGAGTATGTCTCCATCTATCCTTGTGGCGGTTGCAACCCAATT
GGCGCTCTCACTGCCGACATTATTGAACTGGCGGTAAGTTAACACATTATAGGTTAATGCGCGAGGCATCGATTC
AGTCGCGCAAGTCTGGCGAAAAAAACATTTCAGCGAATACCGTGCGCAAAGTGACTGAGGTGCGTTTGGTCGATC
TAAGAGCTTCTCTGGAAGACTCGTGAGAACACACAGCTGACAAGTATGGGCTTTTTTAGAAAACACTGCGCAAAT
TCCAGGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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