Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9405.t1
Gene name
Locationscaffold_47:59209..61690
Strand+
Gene length (bp)2481
Transcript length (bp)2379
Coding sequence length (bp)2379
Protein length (aa) 793

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10443 RNA12 RNA12 protein 2.3E-166 330 749
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.9E-06 166 221

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

Domain # Start End Length
1 252 274 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9405.t1
MIRCTSSIRSGHITVGQNEGIIYVNNIFPHRLQWLLRGPLSHIQPLEGLLARVNNPELAAADPTRIVHRVLPTNL
NLEIKEVVTRYKEGGAFVKYALKSDISHESIENAIKEHLKTNPVKPWFNPFLKVDADLVRGTPWIEDLYRIPSQT
LKVEFLPTSPDKSAAELTQESLYSLFRPYGKILDIQTQPSDSKVLPRYAILRFERPRYAVMARNCMHGFIVSEEA
GGGKSGTRFKINYERKIKLFMIRDWILNHPRLVIPAIAALLATITVIIFDPIRTFFITLKIKSSFQSEENPVLQW
VRKQASKASLFSFGKRKSDPRGLAAIWEDRQTEIAQLQAWLTETAETFIVIHGPRGSGKRELVLEQALKEHKYKV
IIDCKQIQDARGDTTKISRAAAQVGYRPIFSWMNSISSFIDLAAQGMIGTKAGFSETLDAQLSKIWQNTGVAMKR
VALEGRRKEDKDFNMSEDEYLEAHPEVRPVVVIDNFLYDEDDSVVLDKLTEWAAGLTSANIAHVIFLTTDASFAK
PLSKAMPNQVFRTIALGDCSLEVGRRFVLSHLDAEADDSDDEQNARRKETLRGLDACIKVLGGRVTDLEFMAHRI
EAGETPEAAVDRIIEQSASEILKLFILGTESITLQWSREQAWHLIKSIAHSKDGNLLYNKVLLDDVFKDNGEVTL
RALEQAELVSIGTDKGFPRYVKPGKPVYRAAFQRLVANKTLQGRLDLLILSQLINNENSSITKYEQELQVLGSLP
KYPWELTSRIEWLLRKVHGSQSKILKYESESAALSKSLQKEY*
Coding >Pro_DTO377G3_2|g9405.t1
ATGATACGATGCACATCTTCTATCAGGTCAGGACATATTACAGTAGGACAAAACGAAGGGATTATCTATGTCAAT
AATATATTTCCGCACCGACTACAATGGCTGCTGAGGGGACCCCTCAGCCATATTCAGCCTCTCGAGGGACTTTTG
GCACGAGTCAACAACCCAGAACTAGCGGCAGCCGACCCGACTCGTATTGTTCATCGAGTTTTGCCCACAAATTTA
AATCTGGAGATCAAAGAGGTCGTGACGAGGTACAAAGAGGGAGGCGCATTCGTGAAGTATGCACTTAAGTCGGAC
ATCAGCCACGAAAGTATCGAAAATGCAATCAAAGAGCATTTGAAAACCAATCCAGTTAAGCCCTGGTTCAATCCG
TTCCTGAAAGTCGATGCAGACCTTGTTCGCGGAACGCCTTGGATCGAAGATCTCTATCGAATCCCAAGCCAGACC
CTAAAGGTGGAGTTCTTACCAACGTCGCCAGATAAATCAGCGGCCGAATTGACCCAAGAGTCTTTATACTCATTG
TTCCGACCTTACGGCAAAATTCTGGACATCCAAACACAGCCCTCAGATTCGAAAGTCCTACCACGATATGCAATT
CTGCGATTCGAGCGCCCTAGGTACGCCGTGATGGCAAGAAACTGCATGCACGGATTTATTGTTTCCGAAGAAGCA
GGAGGTGGCAAGTCCGGTACGAGGTTCAAGATCAACTACGAGCGCAAGATCAAGCTGTTTATGATCAGGGATTGG
ATTTTGAACCATCCGAGACTAGTGATCCCTGCTATAGCTGCTCTGTTGGCTACTATCACGGTCATCATCTTCGAT
CCAATTCGCACGTTCTTCATCACTCTCAAAATCAAGTCGTCGTTCCAGAGTGAAGAGAACCCAGTGCTACAGTGG
GTTCGCAAACAAGCCAGCAAAGCGAGCCTGTTCTCATTTGGGAAGCGAAAGTCAGACCCGCGAGGTCTAGCAGCT
ATCTGGGAAGACCGACAAACAGAGATTGCGCAACTGCAAGCCTGGCTAACGGAGACCGCGGAGACCTTTATTGTT
ATCCATGGTCCTCGTGGCTCAGGGAAACGCGAGTTGGTTTTGGAACAAGCCCTGAAAGAGCACAAGTATAAAGTC
ATCATTGACTGCAAGCAAATTCAAGATGCTCGGGGTGATACAACTAAGATTTCACGAGCAGCCGCTCAGGTCGGC
TACCGACCGATCTTCTCTTGGATGAACAGTATCAGCAGCTTCATTGACCTTGCTGCACAGGGAATGATCGGCACC
AAAGCCGGCTTCTCCGAGACTCTAGATGCGCAGTTGAGCAAGATCTGGCAGAATACTGGTGTCGCTATGAAGCGA
GTCGCCTTGGAAGGTAGACGAAAGGAGGACAAAGATTTCAACATGTCCGAAGATGAGTACCTGGAGGCTCATCCC
GAGGTGAGACCTGTCGTTGTGATTGACAATTTCCTCTATGACGAGGATGACAGTGTCGTGCTCGACAAACTTACC
GAATGGGCGGCTGGTCTGACATCCGCAAATATCGCCCATGTCATCTTCTTGACGACTGATGCCTCGTTTGCAAAG
CCATTGAGCAAAGCCATGCCTAACCAAGTGTTCCGCACAATTGCCTTAGGTGACTGCTCGCTCGAAGTTGGTCGT
CGTTTCGTGTTGAGTCATCTGGATGCCGAGGCAGACGATAGTGACGATGAACAGAATGCAAGGCGCAAAGAGACG
CTTCGTGGCTTGGATGCTTGTATCAAAGTGCTGGGAGGTCGAGTTACTGACTTGGAGTTCATGGCTCATCGAATT
GAGGCCGGAGAGACACCTGAAGCTGCCGTGGACCGTATCATTGAACAGTCGGCGTCTGAAATCCTGAAGCTCTTC
ATCCTCGGAACAGAGTCAATTACACTCCAGTGGTCCCGTGAGCAGGCGTGGCATCTGATCAAGTCTATCGCCCAC
TCCAAGGATGGAAACCTGTTGTACAACAAAGTCCTCCTCGACGATGTATTCAAGGACAACGGCGAGGTCACTCTC
CGGGCACTAGAGCAAGCAGAGCTTGTCTCCATCGGGACTGACAAAGGATTCCCACGATACGTCAAACCGGGCAAA
CCCGTGTATCGCGCGGCTTTCCAACGTCTGGTTGCGAACAAGACCCTGCAGGGCCGCCTTGACTTGTTAATCCTC
TCACAGCTCATTAACAACGAGAATTCAAGTATCACGAAGTATGAACAGGAGCTGCAGGTCCTTGGCTCACTGCCA
AAGTACCCCTGGGAGCTAACGTCGCGGATCGAGTGGCTTCTGCGCAAAGTTCACGGATCGCAATCGAAGATTCTC
AAGTATGAGAGTGAAAGTGCTGCCTTGTCAAAGTCTTTGCAGAAGGAATATTAA
Transcript >Pro_DTO377G3_2|g9405.t1
ATGATACGATGCACATCTTCTATCAGGTCAGGACATATTACAGTAGGACAAAACGAAGGGATTATCTATGTCAAT
AATATATTTCCGCACCGACTACAATGGCTGCTGAGGGGACCCCTCAGCCATATTCAGCCTCTCGAGGGACTTTTG
GCACGAGTCAACAACCCAGAACTAGCGGCAGCCGACCCGACTCGTATTGTTCATCGAGTTTTGCCCACAAATTTA
AATCTGGAGATCAAAGAGGTCGTGACGAGGTACAAAGAGGGAGGCGCATTCGTGAAGTATGCACTTAAGTCGGAC
ATCAGCCACGAAAGTATCGAAAATGCAATCAAAGAGCATTTGAAAACCAATCCAGTTAAGCCCTGGTTCAATCCG
TTCCTGAAAGTCGATGCAGACCTTGTTCGCGGAACGCCTTGGATCGAAGATCTCTATCGAATCCCAAGCCAGACC
CTAAAGGTGGAGTTCTTACCAACGTCGCCAGATAAATCAGCGGCCGAATTGACCCAAGAGTCTTTATACTCATTG
TTCCGACCTTACGGCAAAATTCTGGACATCCAAACACAGCCCTCAGATTCGAAAGTCCTACCACGATATGCAATT
CTGCGATTCGAGCGCCCTAGGTACGCCGTGATGGCAAGAAACTGCATGCACGGATTTATTGTTTCCGAAGAAGCA
GGAGGTGGCAAGTCCGGTACGAGGTTCAAGATCAACTACGAGCGCAAGATCAAGCTGTTTATGATCAGGGATTGG
ATTTTGAACCATCCGAGACTAGTGATCCCTGCTATAGCTGCTCTGTTGGCTACTATCACGGTCATCATCTTCGAT
CCAATTCGCACGTTCTTCATCACTCTCAAAATCAAGTCGTCGTTCCAGAGTGAAGAGAACCCAGTGCTACAGTGG
GTTCGCAAACAAGCCAGCAAAGCGAGCCTGTTCTCATTTGGGAAGCGAAAGTCAGACCCGCGAGGTCTAGCAGCT
ATCTGGGAAGACCGACAAACAGAGATTGCGCAACTGCAAGCCTGGCTAACGGAGACCGCGGAGACCTTTATTGTT
ATCCATGGTCCTCGTGGCTCAGGGAAACGCGAGTTGGTTTTGGAACAAGCCCTGAAAGAGCACAAGTATAAAGTC
ATCATTGACTGCAAGCAAATTCAAGATGCTCGGGGTGATACAACTAAGATTTCACGAGCAGCCGCTCAGGTCGGC
TACCGACCGATCTTCTCTTGGATGAACAGTATCAGCAGCTTCATTGACCTTGCTGCACAGGGAATGATCGGCACC
AAAGCCGGCTTCTCCGAGACTCTAGATGCGCAGTTGAGCAAGATCTGGCAGAATACTGGTGTCGCTATGAAGCGA
GTCGCCTTGGAAGGTAGACGAAAGGAGGACAAAGATTTCAACATGTCCGAAGATGAGTACCTGGAGGCTCATCCC
GAGGTGAGACCTGTCGTTGTGATTGACAATTTCCTCTATGACGAGGATGACAGTGTCGTGCTCGACAAACTTACC
GAATGGGCGGCTGGTCTGACATCCGCAAATATCGCCCATGTCATCTTCTTGACGACTGATGCCTCGTTTGCAAAG
CCATTGAGCAAAGCCATGCCTAACCAAGTGTTCCGCACAATTGCCTTAGGTGACTGCTCGCTCGAAGTTGGTCGT
CGTTTCGTGTTGAGTCATCTGGATGCCGAGGCAGACGATAGTGACGATGAACAGAATGCAAGGCGCAAAGAGACG
CTTCGTGGCTTGGATGCTTGTATCAAAGTGCTGGGAGGTCGAGTTACTGACTTGGAGTTCATGGCTCATCGAATT
GAGGCCGGAGAGACACCTGAAGCTGCCGTGGACCGTATCATTGAACAGTCGGCGTCTGAAATCCTGAAGCTCTTC
ATCCTCGGAACAGAGTCAATTACACTCCAGTGGTCCCGTGAGCAGGCGTGGCATCTGATCAAGTCTATCGCCCAC
TCCAAGGATGGAAACCTGTTGTACAACAAAGTCCTCCTCGACGATGTATTCAAGGACAACGGCGAGGTCACTCTC
CGGGCACTAGAGCAAGCAGAGCTTGTCTCCATCGGGACTGACAAAGGATTCCCACGATACGTCAAACCGGGCAAA
CCCGTGTATCGCGCGGCTTTCCAACGTCTGGTTGCGAACAAGACCCTGCAGGGCCGCCTTGACTTGTTAATCCTC
TCACAGCTCATTAACAACGAGAATTCAAGTATCACGAAGTATGAACAGGAGCTGCAGGTCCTTGGCTCACTGCCA
AAGTACCCCTGGGAGCTAACGTCGCGGATCGAGTGGCTTCTGCGCAAAGTTCACGGATCGCAATCGAAGATTCTC
AAGTATGAGAGTGAAAGTGCTGCCTTGTCAAAGTCTTTGCAGAAGGAATATTAA
Gene >Pro_DTO377G3_2|g9405.t1
ATGATACGATGCACATCTTCTATCAGGTCAGGACATATTACAGTAGGACAAAACGAAGGGATTATCTATGTCAAT
AGTGAGCGCCGACTAATTGCAAGCTATCATGTCTATCCACTAACTAGCCCTAGATATATTTCCGCACCGACTACA
ATGGCTGCTGAGGGGACCCCTCAGCCATATTCAGCCTCTCGAGGGACTTTTGGCACGAGTCAACAACCCAGAACT
AGCGGCAGCCGACCCGACTCGTATTGTTCATCGAGTTTTGCCCACAAATTTAAATCTGGAGATCAAAGAGGTCGT
GACGAGGTACAAAGAGGGAGGCGCATTCGTGAAGTATGCACTTAAGTCGGACATCAGCCACGAAAGTATCGAAAA
TGCAATCAAAGAGCATTTGAAAACCAATCCAGTTAAGCCCTGGTTCAATCCGTTCCTGAAAGTCGATGCAGACCT
TGTTCGCGGAACGCCTTGGATCGAAGATCTCTATCGAATCCCAAGCCAGACCCTAAAGGTGGAGTTCTTACCAAC
GTCGCCAGATAAATCAGCGGCCGAATTGACCCAAGAGTCTTTATACTCATTGTTCCGACCTTACGGCAAAATTCT
GGACATCCAAACACAGCCCTCAGATTCGAAAGTCCTACCACGATATGCAATTCTGCGATTCGAGCGCCCTAGGTA
CGCCGTGATGGCAAGAAACTGCATGCACGGATTTATTGTTTCCGAAGAAGCAGGAGGTGGCAAGTCCGGTACGAG
GTTCAAGATCAACTACGAGCGCAAGATCAAGCTGTTTATGATCAGGGATTGGATTTTGAACCATCCGAGACTAGT
GATCCCTGCTATAGCTGCTCTGTTGGCTACTATCACGGTCATCATCTTCGATCCAATTCGCACGTTCTTCATCAC
TCTCAAAATCAAGTCGTCGTTCCAGAGTGAAGAGAACCCAGTGCTACAGTGGGTTCGCAAACAAGCCAGCAAAGC
GAGCCTGTTCTCATTTGGGAAGCGAAAGTCAGACCCGCGAGGTCTAGCAGCTATCTGGGAAGACCGACAAACAGA
GATTGCGCAACTGCAAGCCTGGCTAACGGAGACCGCGGAGACCTTTATTGTTATCCATGGTCCTCGTGGCTCAGG
GAAACGCGAGTTGGTTTTGGAACAAGCCCTGAAAGAGCACAAGTATAAAGTCATCATTGACTGCAAGCAAATTCA
AGATGCTCGGGGTGATACAACTAAGATTTCACGAGCAGCCGCTCAGGTCGGCTACCGACCGATCTTCTCTTGGAT
GAACAGTATCAGCAGCTTCATTGACCTTGCTGCACAGGGAATGATCGGCACCAAAGCCGGCTTCTCCGAGACTCT
AGATGCGCAGTTGAGCAAGATCTGGCAGAATACTGGTGTCGCTATGAAGCGAGTCGCCTTGGAAGGTAGACGAAA
GGAGGACAAAGATTTCAACATGTCCGAAGATGAGTACCTGGAGGCTCATCCCGAGGTGAGACCTGTCGTTGTGAT
TGACAATTTCCTCTATGACGAGGATGACAGTGTCGTGCTCGACAAACTTACCGAATGGGCGGCTGGTCTGACATC
CGCAAATATCGCCCATGTCATCTTCTTGACGACTGATGCCTCGTTTGCAAAGCCATTGAGCAAAGCCATGCCTAA
CCAAGTGTTCCGCACAATTGCCTTAGGTGACTGCTCGCTCGAAGTTGGTCGTCGTTTCGTGTTGAGTCATCTGGA
TGCCGAGGCAGACGATAGTGACGATGAACAGAATGCAAGGCGCAAAGAGACGCTTCGTGGCTTGGATGCTTGTAT
CAAAGTGCTGGGAGGTCGAGTTACTGACTTGGAGTTCATGGCTCATCGAATTGAGGCCGGAGAGACACCTGAAGG
TATGTTTATCTTTTTTTCTACCTGGAGAATTCTATTAACCATTGTATAGCTGCCGTGGACCGTATCATTGAACAG
TCGGCGTCTGAAATCCTGAAGCTCTTCATCCTCGGAACAGAGTCAATTACACTCCAGTGGTCCCGTGAGCAGGCG
TGGCATCTGATCAAGTCTATCGCCCACTCCAAGGATGGAAACCTGTTGTACAACAAAGTCCTCCTCGACGATGTA
TTCAAGGACAACGGCGAGGTCACTCTCCGGGCACTAGAGCAAGCAGAGCTTGTCTCCATCGGGACTGACAAAGGA
TTCCCACGATACGTCAAACCGGGCAAACCCGTGTATCGCGCGGCTTTCCAACGTCTGGTTGCGAACAAGACCCTG
CAGGGCCGCCTTGACTTGTTAATCCTCTCACAGCTCATTAACAACGAGAATTCAAGTATCACGAAGTATGAACAG
GAGCTGCAGGTCCTTGGCTCACTGCCAAAGTACCCCTGGGAGCTAACGTCGCGGATCGAGTGGCTTCTGCGCAAA
GTTCACGGATCGCAATCGAAGATTCTCAAGTATGAGAGTGAAAGTGCTGCCTTGTCAAAGTCTTTGCAGAAGGAA
TATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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