Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9395.t1
Gene name
Locationscaffold_47:35675..36592
Strand-
Gene length (bp)917
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09430 EMC7_beta-sandw ER membrane protein complex subunit 7, beta-sandwich domain 1.1E-29 33 174

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9395.t1
MHFSLSSLLLLGISSLVSASSLTITIPVSSSLPNPHVLPATSHATLTTLPSSGKDHILSASLTRSATFVFHDLPS
SNPDAQPESYLLDICSAGGYVFAPYRVDVAADGSILGIWETFRGNPWDNRGAEKYVVGVTGKKQVDVVVEAKVLG
RKVFYEQRAQFSPLSLVKNPMVLLAVVALGLMFVMPKLMDNMDPEMRAEFEQHSRSSPITGATTSAMAGGGFDLA
SWMAGTGAPNPTASDVTQAGSTGRDTSGPARRRG*
Coding >Pro_DTO377G3_2|g9395.t1
ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC
ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC
TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC
TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC
CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT
GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA
CGGAAGGTCTTCTATGAGCAGCGTGCTCAATTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCTTGCA
GTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACATGGATCCTGAGATGCGCGCCGAATTT
GAGCAGCACTCTCGCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCC
AGTTGGATGGCGGGCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGAT
ACGAGTGGTCCTGCCCGGAGGCGTGGATAG
Transcript >Pro_DTO377G3_2|g9395.t1
ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC
ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC
TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC
TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC
CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT
GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA
CGGAAGGTCTTCTATGAGCAGCGTGCTCAATTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCTTGCA
GTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACATGGATCCTGAGATGCGCGCCGAATTT
GAGCAGCACTCTCGCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCC
AGTTGGATGGCGGGCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGAT
ACGAGTGGTCCTGCCCGGAGGCGTGGATAG
Gene >Pro_DTO377G3_2|g9395.t1
ATGCATTTCTCGCTCTCCTCTCTTCTCCTGCTAGGGATTAGCAGTCTGGTGTCTGCCAGCTCTTTGACAATTACC
ATTCCCGTCTCTAGTTCCCTCCCAAACCCGCATGTCCTCCCCGCAACCAGCCATGCCACTCTCACCACTCTCCCC
TCTAGTGGGAAAGACCACATCCTGTCCGCATCGCTGACTCGCTCGGCGACGTTCGTGTTCCATGATCTTCCATCC
TCCAATCCGGATGCTCAGCCCGAGTCCTACTTGCTCGATATCTGCTCCGCTGGTGGCTACGTCTTCGCCCCCTAC
CGCGTCGATGTTGCGGCTGATGGATCCATTCTCGGAATCTGGGAGACTTTTCGCGGGAACCCGTGGGATAACCGT
GGTGCGGAGAAATATGTAGTGGGTGTTACTGGAAAGAAGCAAGTTGACGTGGTTGTCGAGGCCAAGGTCCTTGGA
CGGAAGGTCTTCTATGAGCAGCGTGCTCAATGTGAGCTTGCCTCCTCTTCCCCGCAGATACAACCTGTAATATTT
GTCCATAGCTGTGCTAACTTTGTATCGAATCGCAGTCTCTCCCTTGAGTCTTGTCAAGAACCCAATGGTTTTGCT
TGCAGTTGTCGCGCTGGGTCTCATGTTTGTCATGCCCAAGCTCATGGATAACAGTATGTCTATTCCCCATTGACC
CTAATCCAATGTTGGGTGCCTAACTTTGTTGTCCAGTGGATCCTGAGATGCGCGCCGAATTTGAGCAGCACTCTC
GCTCCTCGCCCATCACCGGTGCCACTACCAGTGCCATGGCTGGTGGCGGGTTTGATCTGGCCAGTTGGATGGCGG
GCACTGGTGCACCTAACCCCACGGCCAGCGATGTGACTCAGGCTGGTTCAACTGGTAGAGATACGAGTGGTCCTG
CCCGGAGGCGTGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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