Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9364.t1
Gene name
Locationscaffold_46:46323..47568
Strand+
Gene length (bp)1245
Transcript length (bp)1245
Coding sequence length (bp)1245
Protein length (aa) 415

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01331 mRNA_cap_enzyme mRNA capping enzyme, catalytic domain 1.3E-52 42 242
PF03919 mRNA_cap_C mRNA capping enzyme, C-terminal domain 6.2E-34 246 368
PF01068 DNA_ligase_A_M ATP dependent DNA ligase domain 4.4E-06 134 242

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0006281 DNA repair Yes
GO:0003910 DNA ligase (ATP) activity Yes
GO:0006310 DNA recombination Yes
GO:0004484 mRNA guanylyltransferase activity Yes
GO:0006370 7-methylguanosine mRNA capping Yes
GO:0006396 RNA processing No
GO:0043170 macromolecule metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0016779 nucleotidyltransferase activity No
GO:0044238 primary metabolic process No
GO:0043168 anion binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0003824 catalytic activity No
GO:0006950 response to stress No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0033554 cellular response to stress No
GO:0044260 cellular macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0016071 mRNA metabolic process No
GO:0032553 ribonucleotide binding No
GO:0071704 organic substance metabolic process No
GO:0016740 transferase activity No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0070568 guanylyltransferase activity No
GO:0036260 RNA capping No
GO:0009452 7-methylguanosine RNA capping No
GO:0006397 mRNA processing No
GO:0036094 small molecule binding No
GO:0044237 cellular metabolic process No
GO:0016070 RNA metabolic process No
GO:0050896 response to stimulus No
GO:0005488 binding No
GO:0016886 ligase activity, forming phosphoric ester bonds No
GO:0006259 DNA metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003909 DNA ligase activity No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0008192 RNA guanylyltransferase activity No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0008144 drug binding No
GO:0000166 nucleotide binding No
GO:0008150 biological_process No
GO:0140097 catalytic activity, acting on DNA No
GO:0051716 cellular response to stimulus No
GO:0016874 ligase activity No
GO:0008152 metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0017076 purine nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0006974 cellular response to DNA damage stimulus No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9364.t1
MSHAVPDLDAIGIKADHDLADQFRREVANLLGRNNLNFPGAQPVSFSSRHLVELQREDYFVCEKTDGIRCLMYFA
RGDPDSDMPEIHYLIDRKNDYRYVPGLHFPLPNDESFQGYHVDTLVDGELVNDTYEDGTTQLKYLVFDCLVLDGQ
SLMHRTLDKRLAYFKEKVLRPYNAMYRKFPEEKNHRPFAVEDKSTQFSYGLEMMFREIIPKVKRIHGNDGLIFTC
RSTPYRIGTDEHILKWKPPQENTVDFRMRLEFPTLEPDTEDEADGITQPYVDYDAIPTCHLFVMLNAGEYRHFGE
MFLEPKEWEDLKALGIPLDDTIVECAKDMEGRWRFHRLRDDKNDANHISTVEKVLESIEDRVTEEDLIRLAPLIK
TAWKQRQHNMAAAGEDKKRRAQALPPSANANGVKRKFEG*
Coding >Pro_DTO377G3_2|g9364.t1
ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC
GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC
CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG
CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC
GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT
GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA
AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG
TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC
CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC
CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT
TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC
GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG
ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC
GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT
GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA
ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA
CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA
Transcript >Pro_DTO377G3_2|g9364.t1
ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC
GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC
CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG
CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC
GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT
GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA
AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG
TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC
CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC
CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT
TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC
GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG
ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC
GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT
GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA
ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA
CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA
Gene >Pro_DTO377G3_2|g9364.t1
ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC
GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC
CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG
CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC
GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT
GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA
AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG
TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC
CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC
CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT
TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC
GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG
ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC
GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT
GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA
ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA
CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA

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