Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g9364.t1
Gene name
Location	scaffold_46:46323..47568
Strand	+
Gene length (bp)	1245
Transcript length (bp)	1245
Coding sequence length (bp)	1245
Protein length (aa)	415

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01331	mRNA_cap_enzyme	mRNA capping enzyme, catalytic domain	1.4E-52	42	242
PF03919	mRNA_cap_C	mRNA capping enzyme, C-terminal domain	1.7E-32	246	368
PF01068	DNA_ligase_A_M	ATP dependent DNA ligase domain	4.8E-06	134	242

GO

GO Term	Description	Terminal node
GO:0006310	DNA recombination	Yes
GO:0005524	ATP binding	Yes
GO:0006370	7-methylguanosine mRNA capping	Yes
GO:0003910	DNA ligase (ATP) activity	Yes
GO:0006281	DNA repair	Yes
GO:0004484	mRNA guanylyltransferase activity	Yes
GO:0016071	mRNA metabolic process	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0030554	adenyl nucleotide binding	No
GO:0008150	biological_process	No
GO:0016740	transferase activity	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0000166	nucleotide binding	No
GO:0070568	guanylyltransferase activity	No
GO:0006396	RNA processing	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008152	metabolic process	No
GO:0016886	ligase activity, forming phosphoric ester bonds	No
GO:0043167	ion binding	No
GO:0036260	RNA capping	No
GO:0006259	DNA metabolic process	No
GO:0016772	transferase activity, transferring phosphorus-containing groups	No
GO:0016070	RNA metabolic process	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0033554	cellular response to stress	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0003824	catalytic activity	No
GO:0003909	DNA ligase activity	No
GO:1901265	nucleoside phosphate binding	No
GO:0044238	primary metabolic process	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0009452	7-methylguanosine RNA capping	No
GO:0009987	cellular process	No
GO:0140097	catalytic activity, acting on DNA	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0051716	cellular response to stimulus	No
GO:0016779	nucleotidyltransferase activity	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No
GO:0006397	mRNA processing	No
GO:0050896	response to stimulus	No
GO:0008192	RNA guanylyltransferase activity	No
GO:0032555	purine ribonucleotide binding	No
GO:0032553	ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0006950	response to stress	No
GO:0016874	ligase activity	No
GO:0006807	nitrogen compound metabolic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:0036094	small molecule binding	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	8752
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g9542.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g3049.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g9586.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g8371.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g9778.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g6929.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g7923.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g9741.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g8304.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g6456.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g9801.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g6769.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g8028.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g5919.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g696.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g6385.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g8431.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g3769.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g4483.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g8296.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g7288.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g8900.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g5262.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g8556.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g2727.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g3446.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g9641.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g8383.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g7276.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g7745.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g6153.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g4357.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g5510.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g9364.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g9364.t1 MSHAVPDLDAIGIKADHDLADQFRREVANLLGRNNLNFPGAQPVSFSSRHLVELQREDYFVCEKTDGIRCLMYFA RGDPDSDMPEIHYLIDRKNDYRYVPGLHFPLPNDESFQGYHVDTLVDGELVNDTYEDGTTQLKYLVFDCLVLDGQ SLMHRTLDKRLAYFKEKVLRPYNAMYRKFPEEKNHRPFAVEDKSTQFSYGLEMMFREIIPKVKRIHGNDGLIFTC RSTPYRIGTDEHILKWKPPQENTVDFRMRLEFPTLEPDTEDEADGITQPYVDYDAIPTCHLFVMLNAGEYRHFGE MFLEPKEWEDLKALGIPLDDTIVECAKDMEGRWRFHRLRDDKNDANHISTVEKVLESIEDRVTEEDLIRLAPLIK TAWKQRQHNMAAAGEDKKRRAQALPPSANANGVKRKFEG*
Coding	>Pro_DTO377G3_2|g9364.t1 ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA
Transcript	>Pro_DTO377G3_2|g9364.t1 ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA
Gene	>Pro_DTO377G3_2|g9364.t1 ATGAGCCACGCTGTCCCCGATCTAGACGCGATTGGCATCAAAGCCGACCATGACCTAGCTGATCAGTTTCGCCGC GAAGTCGCCAACCTTCTCGGGCGCAACAACCTCAACTTCCCTGGCGCACAACCGGTCAGCTTCTCGTCGCGGCAC CTTGTCGAGCTACAGCGGGAGGACTACTTTGTCTGCGAAAAGACCGACGGTATCCGCTGCCTGATGTATTTTGCG CGCGGAGATCCCGACTCCGATATGCCCGAGATTCATTACCTGATCGATCGCAAGAACGACTACCGCTACGTGCCC GGCCTACACTTCCCCCTACCGAACGACGAAAGTTTCCAGGGATACCACGTCGACACCCTGGTTGACGGCGAGCTT GTCAACGACACCTACGAGGATGGAACCACCCAGCTGAAATATCTGGTCTTCGACTGCCTGGTGCTGGACGGGCAA AGCTTGATGCACCGTACCCTTGATAAGCGTCTAGCATACTTCAAGGAGAAGGTACTCAGGCCATACAATGCCATG TATCGCAAATTCCCGGAGGAGAAGAATCACCGCCCATTCGCAGTCGAGGACAAATCCACACAATTTAGTTACGGC CTTGAGATGATGTTCCGCGAAATCATTCCCAAGGTCAAGCGCATTCACGGCAACGACGGTCTCATCTTTACTTGC CGCAGTACTCCGTACCGCATCGGCACCGACGAGCACATCCTCAAATGGAAGCCACCCCAGGAGAACACTGTTGAT TTCCGTATGCGCCTTGAGTTTCCGACACTCGAGCCAGATACCGAGGATGAGGCTGATGGTATCACCCAGCCCTAC GTGGACTACGACGCTATCCCAACCTGCCACCTGTTCGTCATGCTCAATGCTGGTGAGTACCGTCATTTTGGAGAG ATGTTTCTCGAGCCAAAGGAATGGGAAGATCTCAAAGCTCTTGGCATTCCTCTTGATGACACTATTGTTGAGTGC GCCAAAGATATGGAAGGACGCTGGCGCTTCCATCGTCTTCGTGATGACAAGAACGATGCGAACCACATCTCCACT GTTGAAAAGGTTCTTGAAAGTATTGAGGACCGCGTCACTGAAGAGGATCTCATCCGCCTTGCTCCCCTCATCAAA ACAGCTTGGAAGCAGCGCCAGCACAATATGGCTGCTGCGGGTGAGGACAAAAAACGGAGAGCCCAAGCTTTGCCA CCGTCCGCAAATGCGAATGGTGTCAAGCGGAAATTTGAGGGGTGA